Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015452 Sechium edule HOM05D007332 ORTHO05D009297 3.3e-75 285.0 150 100.0
ClCG11G015900 Citrullus lanatus HOM05D007332 ORTHO05D009297 1.8e-41 172.9 131 71.0
MELO3C010504.2 Cucumis melo HOM05D007332 ORTHO05D009297 6.9e-33 144.4 156 56.4
CsaV3_4G028070 Cucumis sativus L. HOM05D007332 ORTHO05D009297 1.2e-32 143.7 134 61.2
CiPaw.15G033700 Carya illinoinensis HOM05D007332 ORTHO05D009297 1.0e-15 87.4 154 42.9
Atru.chr13.1537 Acer truncatum HOM05D007332 ORTHO05D009297 2.2e-15 86.3 143 39.9
QL09p033201 Quercus lobata HOM05D007332 ORTHO05D009297 3.8e-15 85.5 163 41.1
Ciclev10002610m.g Citrus clementina HOM05D007332 ORTHO05D009297 5.0e-15 85.1 155 39.4
Manes.02G166600 Manihot esculenta HOM05D007332 ORTHO05D009297 3.6e-13 79.0 153 34.6
TWI34G0633 Tripterygium wilfordii HOM05D007332 ORTHO05D009297 3.6e-13 79.0 145 43.4
Gohir.A06G046800 Gossypium hirsutum HOM05D007332 ORTHO05D009297 4.6e-13 78.6 154 37.7
Psat5g085840 Pisum sativum HOM05D007332 ORTHO05D009297 4.6e-13 78.6 127 40.9
arahy.Tifrunner.gnm1.ann1.396V4Q Arachis hypogaea HOM05D007332 ORTHO05D009297 1.0e-12 77.4 167 40.1
COL.COLO4_03954 Corchorus olitorius HOM05D007332 ORTHO05D009297 1.0e-12 77.4 176 33.5
Hma1.2p1_0542F.1_g174970 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 1.0e-12 77.4 156 36.5
Phvul.009G128000 Phaseolus vulgaris HOM05D007332 ORTHO05D009297 1.0e-12 77.4 131 41.2
Cfa018560 Carpinus fangiana HOM05D007332 ORTHO05D009297 1.4e-12 77.0 142 41.5
Ca_16594_v3 Cicer arietinum L. HOM05D007332 ORTHO05D009297 1.4e-12 77.0 127 41.7
arahy.Tifrunner.gnm1.ann1.ILK6IZ Arachis hypogaea HOM05D007332 ORTHO05D009297 3.9e-12 75.5 165 39.4
Lj1g0005314 Lotus japonicus HOM05D007332 ORTHO05D009297 3.9e-12 75.5 134 40.3
Potri.005G181200 Populus trichocarpa HOM05D007332 ORTHO05D009297 3.9e-12 75.5 153 42.5
arahy.Tifrunner.gnm1.ann1.34D5TH Arachis hypogaea HOM05D007332 ORTHO05D009297 5.1e-12 75.1 167 39.5
Duzib093G1986 Durio zibethinus HOM05D007332 ORTHO05D009297 5.1e-12 75.1 163 36.2
CAN.G1486.2 Capsicum annuum HOM05D007332 ORTHO05D009297 1.9e-11 73.2 159 35.2
Dinv27272 Davidia involucrata HOM05D001470 ORTHO05D006430 3.3e-11 72.4 153 42.5
Sabra02G0062700 Salix brachista HOM05D007332 ORTHO05D009297 3.3e-11 72.4 152 35.5
Sabra05G0137200 Salix brachista HOM05D007332 ORTHO05D009297 3.3e-11 72.4 155 40.6
Eucgr.F04333 Eucalyptus grandis HOM05D007332 ORTHO05D009297 5.7e-11 71.6 152 37.5
TPR.G13457 Trifolium pratense HOM05D007332 ORTHO05D009297 7.4e-11 71.2 126 39.7
Medtr3g088400 Medicago truncatula HOM05D007332 ORTHO05D009297 9.7e-11 70.9 128 38.3
PGR044G1395 Punica granatum HOM05D007332 ORTHO05D009297 9.7e-11 70.9 150 36.7
Duzib116G0046 Durio zibethinus HOM05D007332 ORTHO05D009297 1.3e-10 70.5 158 36.1
Glyma.04G246900 Glycine max HOM05D007332 ORTHO05D009297 1.3e-10 70.5 126 39.7
Glyma.06G115900 Glycine max HOM05D007332 ORTHO05D009297 1.3e-10 70.5 129 38.8
Gorai.010G052700 Gossypium raimondii HOM05D007332 ORTHO05D009297 1.3e-10 70.5 151 36.4
Nitab4.5_0006720g0020 Nicotiana tabacum HOM05D007332 ORTHO05D009297 1.3e-10 70.5 158 35.4
Sopen03g032530 Solanum pennellii HOM05D007332 ORTHO05D009297 2.8e-10 69.3 160 34.4
Nn1g08887 Nelumbo nucifera HOM05D007332 ORTHO05D009297 3.7e-10 68.9 134 44.8
Potri.002G080200 Populus trichocarpa HOM05D007332 ORTHO05D009297 4.8e-10 68.6 173 31.8
FAN27G1631 Fragaria x ananassa HOM05D007332 ORTHO05D009297 1.1e-09 67.4 157 38.9
PGSC0003DMG400024564 Solanum tuberosum HOM05D007332 ORTHO05D009297 1.1e-09 67.4 153 33.3
Nn5g28415 Nelumbo nucifera HOM05D007332 ORTHO05D009297 1.4e-09 67.0 154 34.4
Solyc03g113480.1 Solanum lycopersicum HOM05D007332 ORTHO05D009297 1.4e-09 67.0 157 33.1
CSS0048102 Camellia sinensis var. sinensis HOM05D007332 ORTHO05D009297 1.8e-09 66.6 158 37.3
FAN20G0761 Fragaria x ananassa HOM05D007332 ORTHO05D009297 2.4e-09 66.2 151 37.7
Nitab4.5_0000111g0100 Nicotiana tabacum HOM05D007332 ORTHO05D009297 3.1e-09 65.9 160 33.8
Hma1.2p1_0542F.1_g175020 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 4.1e-09 65.5 147 36.7
FAN15G1303 Fragaria x ananassa HOM05D007332 ORTHO05D009297 9.1e-09 64.3 153 35.9
MSTRG.1422 Avicennia marina HOM05D007332 ORTHO05D009297 1.2e-08 63.9 162 36.4
RcHm_v2.0_Chr6g0296401 Rosa chinensis HOM05D007332 ORTHO05D009297 1.2e-08 63.9 151 35.8
VMungo1309G0081 Vigna mungo HOM05D007332 ORTHO05D009297 1.5e-08 63.5 129 35.7
FvH4_2g27560 Fragaria vesca HOM05D007332 ORTHO05D009297 2.6e-08 62.8 153 35.3
FAN24G1344 Fragaria x ananassa HOM05D007332 ORTHO05D009297 2.6e-08 62.8 153 35.3
ECA232G0093 Erigeron canadensis HOM05D007332 ORTHO05D009297 3.4e-08 62.4 132 42.4
MD15G1344600 Malus domestica HOM05D007332 ORTHO05D009297 3.4e-08 62.4 149 40.3
SGA_v2.0_scaffold52G18934 Striga asiatica HOM05D007332 ORTHO05D009297 5.9e-08 61.6 149 32.9
Gohir.A05G237300 Gossypium hirsutum HOM05D007332 ORTHO05D009297 1.0e-07 60.8 163 31.3
Gorai.009G248200 Gossypium raimondii HOM05D007332 ORTHO05D009297 1.0e-07 60.8 163 31.3
HanXRQChr09g0260291 Helianthus annuus HOM05D007332 ORTHO05D009297 1.0e-07 60.8 128 36.7
MBI06_g33108_MAGBIO Magnolia biondii HOM05D007332 ORTHO05D009297 1.3e-07 60.5 138 33.3
TAR381G0705 Trochodendron aralioides HOM05D007332 ORTHO05D009297 1.3e-07 60.5 139 39.6
SalBow7G3495 Salvia bowleyana HOM05D007332 ORTHO05D009297 1.7e-07 60.1 145 37.2
Thhalv10019445m.g Eutrema salsugineum HOM05D007332 ORTHO05D009297 2.2e-07 59.7 186 26.9
Gohir.D05G239400 Gossypium hirsutum HOM05D007332 ORTHO05D009297 2.2e-07 59.7 163 31.3
Dinv14654 Davidia involucrata HOM05D007332 ORTHO05D009297 2.9e-07 59.3 135 40.7
CARHR070880 Cardamine hirsuta HOM05D007332 ORTHO05D009297 5.0e-07 58.5 197 30.5
Carub.0002s2429 Capsella rubella HOM05D007332 ORTHO05D009297 1.1e-06 57.4 194 25.8
Sp5g32550 Schrenkiella parvula HOM05D007332 ORTHO05D009297 1.1e-06 57.4 185 27.6
Peaxi162Scf00310g00043 Petunia axillaris HOM05D007332 ORTHO05D009297 1.4e-06 57.0 153 32.7
AT1G77400 Arabidopsis thaliana HOM05D007332 ORTHO05D009297 2.5e-06 56.2 193 25.9
Lsat_1_v5_gn_4_74261 Lactuca sativa HOM05D007332 ORTHO05D009297 2.5e-06 56.2 130 39.2
Migut.C01053 Erythranthe guttata HOM05D007332 ORTHO05D009297 4.2e-06 55.5 156 34.6
THA.LOC104800214 Tarenaya hassleriana HOM05D007332 ORTHO05D009297 4.2e-06 55.5 127 33.9
Cc10_g12430 Coffea canephora HOM05D007332 ORTHO05D009297 7.2e-06 54.7 175 28.0


User provided reference genes

Program Settings