Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015339 Sechium edule HOM05D007312 ORTHO05D009209 9.0e-42 173.3 97 100.0
CsaV3_1G046220 Cucumis sativus L. HOM05D007312 ORTHO05D009209 5.1e-29 131.0 85 80.0
ClCG01G009570 Citrullus lanatus HOM05D007312 ORTHO05D009209 6.7e-29 130.6 85 80.0
MELO3C021735.2 Cucumis melo HOM05D007312 ORTHO05D009209 9.6e-28 126.7 85 78.8
MD05G1250400 Malus domestica HOM05D007312 ORTHO05D009209 1.1e-20 103.2 80 68.8
Prupe.4G113200 Prunus persica HOM05D007312 ORTHO05D009209 1.6e-19 99.4 84 65.5
BcaB04g18176 Brassica carinata HOM05D007312 ORTHO05D009209 8.2e-19 97.1 84 64.3
BolC8t48163H Brassica oleracea HOM05D007312 ORTHO05D009209 1.4e-18 96.3 84 67.9
Thecc.02G008700 Theobroma cacao HOM05D007312 ORTHO05D009209 1.8e-18 95.9 85 67.1
Potri.012G124500 Populus trichocarpa HOM05D007312 ORTHO05D009209 2.4e-18 95.5 84 66.7
QL11p016282 Quercus lobata HOM05D007312 ORTHO05D009209 3.1e-18 95.1 84 64.3
Gohir.D12G045700 Gossypium hirsutum HOM05D007312 ORTHO05D009209 4.0e-18 94.7 92 62.0
Gorai.008G048300 Gossypium raimondii HOM05D007312 ORTHO05D009209 4.0e-18 94.7 92 62.0
PGR042G3076 Punica granatum HOM05D007312 ORTHO05D009209 4.0e-18 94.7 73 69.9
Gohir.A12G046700 Gossypium hirsutum HOM05D007312 ORTHO05D009209 5.3e-18 94.4 80 66.2
Oeu056034.1 Olea europaea HOM05D007312 ORTHO05D009209 5.3e-18 94.4 84 65.5
Duzib052G0161 Durio zibethinus HOM05D007312 ORTHO05D009209 6.9e-18 94.0 84 63.1
TWI63G0684 Tripterygium wilfordii HOM05D007312 ORTHO05D009209 6.9e-18 94.0 84 64.3
A08p10710 Brassica napus HOM05D007312 ORTHO05D009209 9.0e-18 93.6 85 65.9
BraA08t33069Z Brassica rapa HOM05D007312 ORTHO05D009209 9.0e-18 93.6 85 65.9
Atru.chr10.560 Acer truncatum HOM05D007312 ORTHO05D009209 1.2e-17 93.2 84 64.3
Manes.16G055800 Manihot esculenta HOM05D007312 ORTHO05D009209 1.2e-17 93.2 84 65.5
SalBow8G4543 Salvia bowleyana HOM05D007312 ORTHO05D009209 1.2e-17 93.2 84 64.3
Sp1g26990 Schrenkiella parvula HOM05D007312 ORTHO05D009209 1.2e-17 93.2 85 65.9
Cpa.g.sc5085.1 Carica papaya HOM05D007312 ORTHO05D009209 1.5e-17 92.8 83 67.5
ECA234G3951 Erigeron canadensis HOM05D007312 ORTHO05D009209 2.0e-17 92.4 81 61.7
Ciclev10017175m.g Citrus clementina HOM05D007312 ORTHO05D009209 2.6e-17 92.0 85 63.5
Sabra12G0094300 Salix brachista HOM05D007312 ORTHO05D009209 3.4e-17 91.7 84 64.3
BcaC07g37774 Brassica carinata HOM05D007312 ORTHO05D009209 4.5e-17 91.3 80 67.5
Eucgr.E04250 Eucalyptus grandis HOM05D007312 ORTHO05D009209 4.5e-17 91.3 66 68.2
CiPaw.09G076400 Carya illinoinensis HOM05D007312 ORTHO05D009209 1.0e-16 90.1 80 61.2
Ca_18754_v3 Cicer arietinum L. HOM05D007312 ORTHO05D009209 1.0e-16 90.1 84 64.3
MSTRG.7597 Avicennia marina HOM05D007312 ORTHO05D009209 1.3e-16 89.7 80 62.5
Haze_06075 Corylus avellana HOM05D007312 ORTHO05D009209 2.2e-16 89.0 92 58.7
Dinv25919 Davidia involucrata HOM05D007312 ORTHO05D009209 2.2e-16 89.0 84 63.1
Thhalv10009117m.g Eutrema salsugineum HOM05D007312 ORTHO05D009209 2.2e-16 89.0 85 63.5
RhsimUnG0109200 Rhododendron simsii HOM05D007312 ORTHO05D009209 2.9e-16 88.6 84 63.1
Sc01g0008940 Simmondsia chinensis HOM05D007312 ORTHO05D009209 2.9e-16 88.6 69 71.0
Carub.0001s2957 Capsella rubella HOM05D007312 ORTHO05D009209 4.9e-16 87.8 71 70.4
Cc09_g06000 Coffea canephora HOM05D007312 ORTHO05D009209 4.9e-16 87.8 84 59.5
Hma1.2p1_1005F.1_g246920 Hydrangea macrophylla HOM05D007312 ORTHO05D009209 4.9e-16 87.8 88 62.5
Hund14701 Selenicereus undatus HOM05D007312 ORTHO05D009209 4.9e-16 87.8 80 62.5
CANSAT35G0781 Cannabis sativa HOM05D007312 ORTHO05D009209 6.5e-16 87.4 72 68.1
Solyc02g068710.3 Solanum lycopersicum HOM05D007312 ORTHO05D009209 6.5e-16 87.4 84 60.7
Sopen02g017880 Solanum pennellii HOM05D007312 ORTHO05D009209 6.5e-16 87.4 84 60.7
PGSC0003DMG400010438 Solanum tuberosum HOM05D007312 ORTHO05D009209 6.5e-16 87.4 84 60.7
SGA_v2.0_scaffold298G47689 Striga asiatica HOM05D007312 ORTHO05D009209 6.5e-16 87.4 84 58.3
AT1G31170 Arabidopsis thaliana HOM05D007312 ORTHO05D009209 8.4e-16 87.0 85 63.5
CARHR030640 Cardamine hirsuta HOM05D007312 ORTHO05D009209 1.1e-15 86.7 84 64.3
HanXRQChr12g0381571 Helianthus annuus HOM05D007312 ORTHO05D009209 1.1e-15 86.7 81 60.5
Phvul.002G097300 Phaseolus vulgaris HOM05D007312 ORTHO05D009209 1.4e-15 86.3 84 64.3
Rhsim13G0146500 Rhododendron simsii HOM05D007312 ORTHO05D009209 1.9e-15 85.9 84 61.9
AL1G49340 Arabidopsis lyrata HOM05D007312 ORTHO05D009209 3.2e-15 85.1 85 62.4
Lsat_1_v5_gn_3_106761 Lactuca sativa HOM05D007312 ORTHO05D009209 3.2e-15 85.1 67 65.7
Medtr4g084180 Medicago truncatula HOM05D007312 ORTHO05D009209 3.2e-15 85.1 84 60.7
Ah.01g020500 Amaranthus hybridus HOM05D007312 ORTHO05D009209 4.2e-15 84.7 68 69.1
VMungo0251G1106 Vigna mungo HOM05D007312 ORTHO05D009209 4.2e-15 84.7 84 63.1
MBI18_g11473_MAGBIO Magnolia biondii HOM05D007312 ORTHO05D009209 7.1e-15 84.0 76 57.9
Nitab4.5_0007745g0050 Nicotiana tabacum HOM05D007312 ORTHO05D009209 7.1e-15 84.0 84 58.3
Psat7g129800 Pisum sativum HOM05D007312 ORTHO05D009209 9.3e-15 83.6 84 60.7
RcHm_v2.0_Chr5g0020311 Rosa chinensis HOM05D007312 ORTHO05D009209 9.3e-15 83.6 84 65.5
TPR.G38271 Trifolium pratense HOM05D007312 ORTHO05D009209 9.3e-15 83.6 84 61.9
CSS0025621 Camellia sinensis var. sinensis HOM05D007312 ORTHO05D009209 1.2e-14 83.2 82 64.6
COL.COLO4_17652 Corchorus olitorius HOM05D007312 ORTHO05D009209 1.2e-14 83.2 45 84.4
FvH4_3g12430 Fragaria vesca HOM05D007312 ORTHO05D009209 1.2e-14 83.2 84 64.3
FAN21G0246 Fragaria x ananassa HOM05D007312 ORTHO05D009209 2.1e-14 82.4 85 64.7
Lj2A350T56 Lonicera japonica HOM05D007312 ORTHO05D009209 2.1e-14 82.4 62 69.4
Nitab4.5_0001288g0230 Nicotiana tabacum HOM05D007312 ORTHO05D009209 2.1e-14 82.4 84 58.3
TAR624G0630 Trochodendron aralioides HOM05D007312 ORTHO05D009209 2.1e-14 82.4 84 60.7
FAN16G3369 Fragaria x ananassa HOM05D007312 ORTHO05D009209 2.7e-14 82.0 83 65.1
HPP92_010212 Vanilla planifolia HOM05D007312 ORTHO05D009209 3.5e-14 81.6 64 70.3
Glyma.20G019100 Glycine max HOM05D007312 ORTHO05D009209 4.6e-14 81.3 84 63.1
vmacro03527 Vaccinium macrocarpon HOM05D007312 ORTHO05D009209 6.0e-14 80.9 44 86.4
AUR62010557 Chenopodium quinoa HOM05D007312 ORTHO05D009209 7.9e-14 80.5 68 63.2
FAN25G0614 Fragaria x ananassa HOM05D007312 ORTHO05D009209 7.9e-14 80.5 91 62.6
Sabra12G0063500 Salix brachista HOM05D007312 ORTHO05D009209 1.0e-13 80.1 43 88.4
GSVIVG01012104001 Vitis vinifera HOM05D007312 ORTHO05D009209 1.0e-13 80.1 80 56.2
Nn7g38246 Nelumbo nucifera HOM05D007312 ORTHO05D009209 1.3e-13 79.7 84 60.7
RcHm_v2.0_Chr2g0126261 Rosa chinensis HOM05D007312 ORTHO05D009209 1.3e-13 79.7 59 76.3
Actinidia22408 Actinidia chinensis HOM05D007312 ORTHO05D009209 1.8e-13 79.3 84 57.1
Aa31LG2G15110 Aethionema arabicum HOM05D007312 ORTHO05D009209 5.1e-13 77.8 62 64.5
CAN.G149.9 Capsicum annuum HOM05D007312 ORTHO05D009209 5.1e-13 77.8 43 86.0
Zm00001eb375250 Zea mays HOM05D007312 ORTHO05D009209 5.1e-13 77.8 69 58.0
PSO541G3426 Papaver somniferum HOM05D007312 ORTHO05D009209 6.7e-13 77.4 43 81.4
EL10Ac5g12681 Beta vulgaris HOM05D007312 ORTHO05D009209 8.7e-13 77.0 68 60.3
Peaxi162Scf00149g00224 Petunia axillaris HOM05D007312 ORTHO05D009209 1.1e-12 76.6 84 57.1
HPP92_010191 Vanilla planifolia HOM05D007312 ORTHO05D009209 1.1e-12 76.6 61 70.5
CDE02G1125 Ceratophyllum demersum HOM05D007312 ORTHO05D009209 1.5e-12 76.3 84 56.0
Migut.M01988 Erythranthe guttata HOM05D007312 ORTHO05D009209 1.5e-12 76.3 68 61.8
Os06g0174300 Oryza sativa ssp. japonica HOM05D007312 ORTHO05D009209 1.5e-12 76.3 65 61.5
arahy.Tifrunner.gnm1.ann1.XDA00H Arachis hypogaea HOM05D007312 ORTHO05D009209 1.9e-12 75.9 84 57.1
unitig_32.g10991 Utricularia gibba HOM05D000532 ORTHO05D009209 1.9e-12 75.9 44 75.0
THA.LOC104798553 Tarenaya hassleriana HOM05D007312 ORTHO05D009209 3.3e-12 75.1 84 59.5
AUR62017332 Chenopodium quinoa HOM05D007312 ORTHO05D009209 4.3e-12 74.7 63 61.9
ATR0752G167 Amborella trichopoda HOM05D007312 ORTHO05D009209 5.7e-12 74.3 44 77.3
Aqoxy1G01718 Aquilegia oxysepala HOM05D007312 ORTHO05D009209 9.7e-12 73.6 100 50.0
Lalb_Chr16g0385171 Lupinus albus HOM05D007312 ORTHO05D009209 9.7e-12 73.6 84 57.1
Mapoly0066s0018 Marchantia polymorpha HOM05D007312 ORTHO05D009209 1.6e-11 72.8 44 79.5
Lj4g0021225 Lotus japonicus HOM05D007312 ORTHO05D009209 6.3e-11 70.9 84 57.1
arahy.Tifrunner.gnm1.ann1.FJ5394 Arachis hypogaea HOM05D007312 ORTHO05D009209 1.1e-10 70.1 57 70.2
SMO145G0246 Selaginella moellendorffii HOM05D007312 ORTHO05D009209 1.1e-10 70.1 43 69.8
Pp3c7_15740 Physcomitrium patens HOM05D007312 ORTHO05D009209 6.9e-10 67.4 43 69.8
CBR_g4 Chara braunii HOM05D007312 ORTHO05D009209 1.2e-06 56.6 43 62.8
Lalb_Chr09g0328671 Lupinus albus HOM05D007312 ORTHO05D009209 2.1e-06 55.8 66 45.5


User provided reference genes

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