Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015330 Sechium edule HOM05D007434 ORTHO05D009541 1.7e-55 219.2 114 100.0
ClCG01G016730 Citrullus lanatus HOM05D007434 ORTHO05D009541 2.1e-26 122.5 96 66.7
CsaV3_6G043150 Cucumis sativus L. HOM05D007434 ORTHO05D009541 1.8e-25 119.4 92 65.2
MELO3C007552.2 Cucumis melo HOM05D007434 ORTHO05D009541 2.4e-25 119.0 94 67.0
Sed0003827 Sechium edule HOM05D007434 ORTHO05D009541 6.6e-20 100.9 97 61.9
QL06p042177 Quercus lobata HOM05D007434 ORTHO05D009541 2.4e-14 82.4 94 51.1
FAN23G2206 Fragaria x ananassa HOM05D007434 ORTHO05D009541 1.0e-12 77.0 103 47.6
Ciclev10027106m.g Citrus clementina HOM05D007434 ORTHO05D009541 1.3e-12 76.6 94 48.9
Atru.chr3.394 Acer truncatum HOM05D007434 ORTHO05D009541 3.9e-12 75.1 93 47.3
FvH4_1g15740 Fragaria vesca HOM05D007434 ORTHO05D009541 3.9e-12 75.1 102 45.1
FAN28G0198 Fragaria x ananassa HOM05D007434 ORTHO05D009541 1.5e-11 73.2 102 44.1
CiPaw.02G009300 Carya illinoinensis HOM05D007434 ORTHO05D009541 2.5e-11 72.4 98 43.9
Prupe.7G136000 Prunus persica HOM05D007434 ORTHO05D009541 4.3e-11 71.6 91 49.5
Atru.chr3.392 Acer truncatum HOM05D007434 ORTHO05D009541 7.4e-11 70.9 89 44.9
Glyma.11G057300 Glycine max HOM05D007434 ORTHO05D009541 1.3e-10 70.1 89 49.4
Lj4g0021906 Lotus japonicus HOM05D007434 ORTHO05D009541 1.3e-10 70.1 86 44.2
CiPaw.01G021200 Carya illinoinensis HOM05D007434 ORTHO05D009541 1.6e-10 69.7 93 45.2
Phvul.002G020200 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 1.6e-10 69.7 86 46.5
Potri.007G041500 Populus trichocarpa HOM05D007434 ORTHO05D009541 1.6e-10 69.7 98 44.9
Nn1g05850 Nelumbo nucifera HOM05D007434 ORTHO05D009541 2.1e-10 69.3 97 43.3
Manes.12G100300 Manihot esculenta HOM05D007434 ORTHO05D009541 2.8e-10 68.9 89 42.7
Lj2g0026149 Lotus japonicus HOM05D007434 ORTHO05D009541 6.2e-10 67.8 89 46.1
Lalb_Chr05g0213231 Lupinus albus HOM05D007434 ORTHO05D009541 1.1e-09 67.0 86 46.5
Nn5g30204 Nelumbo nucifera HOM05D007434 ORTHO05D009541 1.1e-09 67.0 90 42.2
Medtr5g017710 Medicago truncatula HOM05D007434 ORTHO05D009541 1.4e-09 66.6 86 47.7
Glyma.01G184900 Glycine max HOM05D007434 ORTHO05D009541 2.4e-09 65.9 89 48.3
Manes.13G126300 Manihot esculenta HOM05D007434 ORTHO05D009541 2.4e-09 65.9 89 42.7
Nn1g05851 Nelumbo nucifera HOM05D007434 ORTHO05D009541 2.4e-09 65.9 91 41.8
Lalb_Chr09g0323081 Lupinus albus HOM05D007434 ORTHO05D009541 1.5e-08 63.2 86 43.0
TPR.G21269 Trifolium pratense HOM05D007434 ORTHO05D009541 1.5e-08 63.2 91 47.3
COL.COLO4_11386 Corchorus olitorius HOM05D007434 ORTHO05D009541 2.0e-08 62.8 90 40.0
TPR.G19007 Trifolium pratense HOM05D007434 ORTHO05D009541 2.0e-08 62.8 90 43.3
Atru.chr3.391 Acer truncatum HOM05D007434 ORTHO05D009541 2.6e-08 62.4 88 39.8
Glyma.05G083900 Glycine max HOM05D007434 ORTHO05D009541 2.6e-08 62.4 86 43.0
MD15G1281800 Malus domestica HOM05D007434 ORTHO05D009541 4.5e-08 61.6 88 44.3
Lalb_Chr09g0333721 Lupinus albus HOM05D007434 ORTHO05D009541 5.8e-08 61.2 92 42.4
Potri.005G136800 Populus trichocarpa HOM05D008581 ORTHO05D009966 5.8e-08 61.2 106 39.6
Lalb_Chr05g0226641 Lupinus albus HOM05D007434 ORTHO05D009541 7.6e-08 60.8 88 43.2
QL06p042201 Quercus lobata HOM05D007434 ORTHO05D009541 7.6e-08 60.8 89 39.3
Atru.chr3.395 Acer truncatum HOM05D007434 ORTHO05D013638 1.7e-07 59.7 100 38.0
Phvul.003G245500 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 1.7e-07 59.7 83 43.4
Glyma.17G176500 Glycine max HOM05D007434 ORTHO05D009541 2.9e-07 58.9 86 43.0
Manes.12G100200 Manihot esculenta HOM05D007434 ORTHO05D009541 2.9e-07 58.9 95 36.8
Glyma.17G176700 Glycine max HOM05D007434 ORTHO05D009541 4.9e-07 58.2 81 46.9
Sabra07G0037300 Salix brachista HOM05D008581 ORTHO05D009966 4.9e-07 58.2 98 39.8
arahy.Tifrunner.gnm1.ann1.0D7IHD Arachis hypogaea HOM05D007434 ORTHO05D009541 6.4e-07 57.8 97 39.2
Dinv29971 Davidia involucrata HOM05D008581 ORTHO05D009541 6.4e-07 57.8 74 44.6
Phvul.003G245601 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 6.4e-07 57.8 86 41.9
Potri.007G042000 Populus trichocarpa HOM05D008581 ORTHO05D009966 1.1e-06 57.0 99 38.4
Aqoxy6G01381 Aquilegia oxysepala HOM05D007434 ORTHO05D009541 1.4e-06 56.6 88 37.5
Prupe.7G136100 Prunus persica HOM05D007434 ORTHO05D013638 1.4e-06 56.6 98 36.7
TPR.G19016 Trifolium pratense HOM05D007434 ORTHO05D009541 2.4e-06 55.8 90 40.0
arahy.Tifrunner.gnm1.ann1.T0173K Arachis hypogaea HOM05D007434 ORTHO05D009541 3.2e-06 55.5 90 43.3
Migut.H00450 Erythranthe guttata HOM05D018578 ORTHO05D020597 3.2e-06 55.5 94 37.2
Glyma.05G084000 Glycine max HOM05D007434 ORTHO05D009541 4.2e-06 55.1 81 42.0
FAN28G0171 Fragaria x ananassa HOM05D007434 ORTHO05D009541 7.1e-06 54.3 102 34.3
Lj2g0001941 Lotus japonicus HOM05D007434 ORTHO05D009541 7.1e-06 54.3 102 36.3
Lalb_Chr05g0213221 Lupinus albus HOM05D007434 ORTHO05D009541 7.1e-06 54.3 90 36.7
CiPaw.01G021300 Carya illinoinensis HOM05D007434 ORTHO05D009541 9.3e-06 53.9 97 39.2
Manes.12G100000 Manihot esculenta HOM05D008581 ORTHO05D009966 9.3e-06 53.9 124 33.9
Manes.13G126400 Manihot esculenta HOM05D007434 ORTHO05D009541 9.3e-06 53.9 91 40.7


User provided reference genes

Program Settings