Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015185 Sechium edule HOM05D005513 ORTHO05D006848 6.1e-177 624.0 307 100.0
Sed0010820 Sechium edule HOM05D005513 ORTHO05D006848 4.7e-161 571.2 307 91.9
CsaV3_6G032350 Cucumis sativus L. HOM05D005513 ORTHO05D006848 3.5e-148 528.5 307 86.0
Cfa015273 Carpinus fangiana HOM05D005513 ORTHO05D006848 4.0e-144 515.0 306 81.4
CiPaw.01G170000 Carya illinoinensis HOM05D005513 ORTHO05D006848 9.8e-143 510.4 306 79.7
Atru.chr4.1482 Acer truncatum HOM05D005513 ORTHO05D006848 2.4e-141 505.8 306 79.7
Cpa.g.sc343.3 Carica papaya HOM05D005513 ORTHO05D006848 5.9e-140 501.1 306 80.4
Gohir.A10G146000 Gossypium hirsutum HOM05D005513 ORTHO05D006848 1.7e-139 499.6 301 79.4
CANSAT56G3287 Cannabis sativa HOM05D005513 ORTHO05D006848 2.3e-139 499.2 302 80.1
Gohir.D10G121000 Gossypium hirsutum HOM05D005513 ORTHO05D006848 2.3e-139 499.2 301 79.7
Gorai.011G132900 Gossypium raimondii HOM05D005513 ORTHO05D006848 2.3e-139 499.2 301 79.7
Duzib151G0764 Durio zibethinus HOM05D005513 ORTHO05D006848 6.6e-139 497.7 302 80.1
Prupe.7G267200 Prunus persica HOM05D005513 ORTHO05D006848 1.1e-138 496.9 306 78.4
Manes.05G132000 Manihot esculenta HOM05D005513 ORTHO05D006848 1.5e-138 496.5 306 78.4
Sabra19G0110200 Salix brachista HOM05D005513 ORTHO05D006848 1.9e-138 496.1 306 78.8
RcHm_v2.0_Chr2g0085091 Rosa chinensis HOM05D005513 ORTHO05D006848 2.5e-138 495.7 306 78.4
Thecc.04G162400 Theobroma cacao HOM05D005513 ORTHO05D006848 2.5e-138 495.7 301 81.4
FAN26G1480 Fragaria x ananassa HOM05D005513 ORTHO05D006848 3.3e-138 495.4 306 77.5
Potri.019G099100 Populus trichocarpa HOM05D005513 ORTHO05D006848 3.3e-138 495.4 306 79.1
Ciclev10021262m.g Citrus clementina HOM05D005513 ORTHO05D006848 7.3e-138 494.2 302 78.5
FAN23G0174 Fragaria x ananassa HOM05D005513 ORTHO05D006848 2.1e-137 492.7 306 77.1
PGR042G2305 Punica granatum HOM05D005513 ORTHO05D006848 2.8e-137 492.3 304 77.3
QL10p057731 Quercus lobata HOM05D005513 ORTHO05D006848 2.8e-137 492.3 305 78.0
Nn7g37504 Nelumbo nucifera HOM05D005513 ORTHO05D006848 3.6e-137 491.9 306 77.8
Atru.chr4.1511 Acer truncatum HOM05D005587 ORTHO05D007287 1.0e-136 490.3 297 80.1
FvH4_1g00490 Fragaria vesca HOM05D005513 ORTHO05D006848 1.0e-136 490.3 306 76.5
Migut.F01838 Erythranthe guttata HOM05D005513 ORTHO05D006848 2.3e-136 489.2 304 77.3
MSTRG.8188 Avicennia marina HOM05D005513 ORTHO05D006848 4.0e-136 488.4 306 76.5
COL.COLO4_08197 Corchorus olitorius HOM05D005513 ORTHO05D006848 5.2e-136 488.0 311 78.1
MELO3C011447.2 Cucumis melo HOM05D005513 ORTHO05D006848 1.5e-135 486.5 345 73.0
TAR362G0948 Trochodendron aralioides HOM05D005513 ORTHO05D006848 1.5e-135 486.5 300 78.0
Actinidia11441 Actinidia chinensis HOM05D005513 ORTHO05D006848 4.4e-135 485.0 318 75.5
Eucgr.L00024 Eucalyptus grandis HOM05D005513 ORTHO05D006848 1.3e-134 483.4 306 76.8
Nitab4.5_0001936g0090 Nicotiana tabacum HOM05D005513 ORTHO05D006848 1.3e-134 483.4 300 77.7
CSS0036954 Camellia sinensis var. sinensis HOM05D005513 ORTHO05D006848 1.7e-134 483.0 306 76.5
GSVIVG01038190001 Vitis vinifera HOM05D005513 ORTHO05D006848 2.9e-134 482.3 306 78.1
TPR.G23516 Trifolium pratense HOM05D005513 ORTHO05D006848 3.7e-134 481.9 300 77.7
HanXRQChr10g0285921 Helianthus annuus HOM05D005513 ORTHO05D006848 4.9e-134 481.5 299 76.3
TWI38G0850 Tripterygium wilfordii HOM05D005513 ORTHO05D006848 4.9e-134 481.5 306 76.8
CAN.G1579.15 Capsicum annuum HOM05D005513 ORTHO05D006848 6.4e-134 481.1 306 78.1
CAN.G575.118 Capsicum annuum HOM05D005513 ORTHO05D006848 8.3e-134 480.7 306 77.8
SalBow3G2273 Salvia bowleyana HOM05D005513 ORTHO05D006848 8.3e-134 480.7 304 76.0
Nitab4.5_0008882g0020 Nicotiana tabacum HOM05D005513 ORTHO05D006848 2.4e-133 479.2 300 76.3
Ca_18624_v3 Cicer arietinum L. HOM05D005513 ORTHO05D006848 3.2e-133 478.8 300 76.7
FAN28G1408 Fragaria x ananassa HOM05D005513 ORTHO05D006848 3.2e-133 478.8 326 71.8
Phvul.003G059600 Phaseolus vulgaris HOM05D005513 ORTHO05D006848 4.1e-133 478.4 300 77.3
Lalb_Chr16g0384361 Lupinus albus HOM05D005513 ORTHO05D006848 5.4e-133 478.0 300 77.3
CAN.G2177.12 Capsicum annuum HOM05D005513 ORTHO05D006848 7.0e-133 477.6 300 78.3
arahy.Tifrunner.gnm1.ann1.GWB5D5 Arachis hypogaea HOM05D005513 ORTHO05D006848 1.2e-132 476.9 300 77.3
Glyma.07G206300 Glycine max HOM05D005513 ORTHO05D006848 1.2e-132 476.9 299 76.9
Medtr4g087590 Medicago truncatula HOM05D005513 ORTHO05D006848 1.6e-132 476.5 300 76.3
PSO675G7310 Papaver somniferum HOM05D005513 ORTHO05D006848 1.6e-132 476.5 302 74.8
vmacro15699 Vaccinium macrocarpon HOM05D005513 ORTHO05D006848 1.6e-132 476.5 317 73.2
VMungo0251G3259 Vigna mungo HOM05D005513 ORTHO05D006848 3.5e-132 475.3 300 77.0
Peaxi162Scf00544g00118 Petunia axillaris HOM05D005513 ORTHO05D006848 5.9e-132 474.6 300 78.0
Atru.BG.100.p Acer truncatum HOM05D005513 ORTHO05D006848 1.0e-131 473.8 283 80.2
arahy.Tifrunner.gnm1.ann1.GC3WT6 Arachis hypogaea HOM05D005513 ORTHO05D006848 1.0e-131 473.8 300 76.7
Sopen12g019010 Solanum pennellii HOM05D005513 ORTHO05D006848 3.0e-131 472.2 307 75.6
Glyma.02G138700 Glycine max HOM05D005513 ORTHO05D006848 3.9e-131 471.9 300 76.0
Lj4g0013603 Lotus japonicus HOM05D005513 ORTHO05D006848 8.6e-131 470.7 300 76.0
Peaxi162Scf00544g00117 Petunia axillaris HOM05D005513 ORTHO05D006848 8.6e-131 470.7 300 76.7
Cc09_g04220 Coffea canephora HOM05D005513 ORTHO05D006848 1.1e-130 470.3 300 75.0
PSO541G5416 Papaver somniferum HOM05D005513 ORTHO05D006848 4.3e-130 468.4 303 73.9
AUR62002417 Chenopodium quinoa HOM05D005513 ORTHO05D006848 5.6e-130 468.0 307 73.3
QL10p057421 Quercus lobata HOM05D005513 ORTHO05D006848 5.6e-130 468.0 363 66.1
Hund12358 Selenicereus undatus HOM05D005513 ORTHO05D006848 1.2e-129 466.8 301 74.1
AUR62023772 Chenopodium quinoa HOM05D005513 ORTHO05D006848 1.6e-129 466.5 307 73.3
EL10Ac3g06111 Beta vulgaris HOM05D005513 ORTHO05D006848 2.8e-129 465.7 301 74.8
MD15G1148400 Malus domestica HOM05D005513 ORTHO05D006848 2.8e-129 465.7 283 79.2
PGSC0003DMG400004444 Solanum tuberosum HOM05D005513 ORTHO05D006848 2.8e-129 465.7 301 75.4
Psat7g119320 Pisum sativum HOM05D005513 ORTHO05D006848 4.7e-129 464.9 300 75.0
RhsimUnG0015400 Rhododendron simsii HOM05D005513 ORTHO05D006848 8.0e-129 464.2 340 68.8
Oeu057533.3 Olea europaea HOM05D005513 ORTHO05D006848 1.8e-128 463.0 337 69.1
Lsat_1_v5_gn_2_40261 Lactuca sativa HOM05D005513 ORTHO05D006848 4.0e-128 461.8 322 70.2
Os08g0542600 Oryza sativa ssp. japonica HOM05D005513 ORTHO05D006848 8.9e-128 460.7 300 73.0
Eucgr.G01603 Eucalyptus grandis HOM05D005513 ORTHO05D006848 5.8e-127 458.0 306 74.5
CAN.G575.103 Capsicum annuum HOM05D005513 ORTHO05D006848 4.9e-126 454.9 305 74.4
Ca_18630_v3 Cicer arietinum L. HOM05D005513 ORTHO05D006848 8.3e-126 454.1 309 71.8
THA.LOC104801693 Tarenaya hassleriana HOM05D005513 ORTHO05D006848 1.1e-125 453.8 301 70.4
ClCG08G010170 Citrullus lanatus HOM05D005513 ORTHO05D006848 1.4e-125 453.4 306 75.5
CSS0028849 Camellia sinensis var. sinensis HOM05D005513 ORTHO05D006848 3.2e-125 452.2 283 77.4
ATR0743G005 Amborella trichopoda HOM05D005513 ORTHO05D006848 4.1e-125 451.8 304 70.1
Rhsim02G0085900 Rhododendron simsii HOM05D005513 ORTHO05D006848 4.1e-125 451.8 358 65.4
Aa31LG3G16700 Aethionema arabicum HOM05D005513 ORTHO05D006848 1.6e-124 449.9 301 71.4
AL6G20970 Arabidopsis lyrata HOM05D005513 ORTHO05D006848 2.0e-124 449.5 299 70.9
ECA238G0802 Erigeron canadensis HOM05D005513 ORTHO05D006848 6.0e-124 448.0 288 74.3
Aqoxy2G04162 Aquilegia oxysepala HOM05D005513 ORTHO05D006848 1.0e-123 447.2 306 69.0
CARHR202830 Cardamine hirsuta HOM05D005513 ORTHO05D006848 1.0e-123 447.2 302 71.9
Zm00001eb037350 Zea mays HOM05D005513 ORTHO05D006848 1.7e-123 446.4 298 71.1
Thhalv10014198m.g Eutrema salsugineum HOM05D005513 ORTHO05D006848 2.3e-123 446.0 302 70.5
BcaB05g21485 Brassica carinata HOM05D005513 ORTHO05D006848 9.5e-122 440.7 303 70.0
C02p04480 Brassica napus HOM05D005513 ORTHO05D006848 9.5e-122 440.7 303 70.0
Carub.0006s0894 Capsella rubella HOM05D005513 ORTHO05D006848 1.2e-121 440.3 302 69.5
AT5G10460 Arabidopsis thaliana HOM05D005513 ORTHO05D006848 2.1e-121 439.5 301 69.1
A02p00500 Brassica napus HOM05D005513 ORTHO05D006848 2.1e-121 439.5 303 70.0
HPP92_011686 Vanilla planifolia HOM05D005513 ORTHO05D006848 2.8e-121 439.1 300 70.0
BraA02t05034Z Brassica rapa HOM05D005513 ORTHO05D006848 3.6e-121 438.7 303 69.6
CAN.G2107.3 Capsicum annuum HOM05D005513 ORTHO05D006848 1.1e-120 437.2 279 77.4
Sp6g32980 Schrenkiella parvula HOM05D005513 ORTHO05D006848 1.1e-120 437.2 302 68.5
HPP92_011691 Vanilla planifolia HOM05D005513 ORTHO05D006848 1.1e-120 437.2 300 69.7
BolC2t06408H Brassica oleracea HOM05D005513 ORTHO05D006848 1.4e-120 436.8 303 69.3
Lj6A199G41 Lonicera japonica HOM05D005513 ORTHO05D006848 3.9e-115 418.7 286 73.1
BcaC03g13313 Brassica carinata HOM05D005513 ORTHO05D006848 1.9e-114 416.4 303 67.3
SEGI_26385 Sequoiadendron giganteum HOM05D005513 ORTHO05D006848 7.6e-111 404.4 301 62.5
Sc19g0006410 Simmondsia chinensis HOM05D005513 ORTHO05D006848 1.7e-110 403.3 250 76.8
Dinv33223 Davidia involucrata HOM05D005513 ORTHO05D006848 9.2e-109 397.5 250 78.4
Nitab4.5_0002604g0050 Nicotiana tabacum HOM05D005513 ORTHO05D006848 1.6e-108 396.7 297 69.7
SGA_v2.0_scaffold122G33215 Striga asiatica HOM05D005513 ORTHO05D006848 6.6e-107 391.3 330 62.4
CAN.G2075.11 Capsicum annuum HOM05D005513 ORTHO05D006848 3.3e-106 389.0 299 66.9
CAN.G575.78 Capsicum annuum HOM05D005513 ORTHO05D006848 4.0e-104 382.1 250 76.0
Solyc12g038820.1 Solanum lycopersicum HOM05D005513 ORTHO05D006848 8.9e-104 380.9 251 74.5
Nitab4.5_0000241g0250 Nicotiana tabacum HOM05D005513 ORTHO05D006848 1.1e-98 364.0 254 72.4
SMO119G0305 Selaginella moellendorffii HOM05D005513 ORTHO05D006848 5.6e-98 361.7 300 57.0
Haze_01354 Corylus avellana HOM05D005513 ORTHO05D006848 8.4e-94 347.8 307 60.3
DCAR_005450 Daucus carota HOM05D005513 ORTHO05D006848 1.4e-88 330.5 219 73.5
Lj6A58T47 Lonicera japonica HOM05D005513 ORTHO05D006848 5.6e-82 308.5 210 73.3
CAN.G2075.13 Capsicum annuum HOM05D005513 ORTHO05D006848 2.0e-79 300.1 235 66.8
MCO04G248 Micromonas commoda HOM05D005513 ORTHO05D006848 4.3e-74 282.3 335 46.6
Medtr4g087600 Medicago truncatula HOM05D005513 ORTHO05D006848 1.1e-72 277.7 215 65.6
CAN.G181.20 Capsicum annuum HOM05D005513 ORTHO05D006848 9.0e-72 274.6 191 72.8
AUR62021707 Chenopodium quinoa HOM05D005513 ORTHO05D006848 1.4e-69 267.3 183 71.0
PRCOL_00005454 Prasinoderma coloniale HOM05D005513 ORTHO05D006848 1.8e-59 233.8 303 43.6
Gorai.004G148900 Gossypium raimondii HOM05D005513 ORTHO05D006848 6.3e-57 225.3 151 74.2
CAN.G1565.3 Capsicum annuum HOM05D005513 ORTHO05D006848 2.0e-55 220.3 306 43.8
Lj6A193T36 Lonicera japonica HOM05D005513 ORTHO05D006848 7.2e-53 211.8 178 64.0
Cre14.g609300 Chlamydomonas reinhardtii HOM05D005513 ORTHO05D006848 4.7e-52 209.1 318 39.3
CAN.G1703.16 Capsicum annuum HOM05D005513 ORTHO05D006848 1.5e-50 204.1 142 71.8
SHI25989 Sapria himalayana HOM05D000105 ORTHO05D000023 1.4e-48 197.6 170 59.4
Cc00_g04390 Coffea canephora HOM05D005513 ORTHO05D006848 2.9e-38 163.3 119 66.4
Lj6A58T48 Lonicera japonica HOM05D005513 ORTHO05D006848 1.1e-37 161.4 121 69.4
Lj6A203T27 Lonicera japonica HOM05D005513 ORTHO05D006848 1.3e-33 147.9 100 73.0
CAN.G1703.15 Capsicum annuum HOM05D005513 ORTHO05D006848 1.1e-29 134.8 91 75.8
CAN.G12630.1 Capsicum annuum HOM05D005513 ORTHO05D006848 3.1e-24 116.7 79 74.7
Lj6A203G20 Lonicera japonica HOM05D005513 ORTHO05D006848 3.1e-24 116.7 176 43.8
RcHm_v2.0_Chr2g0085051 Rosa chinensis HOM05D005513 ORTHO05D343180 1.6e-23 114.4 85 69.4
EL10Ac7g16782 Beta vulgaris HOM05D005513 ORTHO05D006848 6.6e-22 109.0 67 77.6
Lj6C203G2 Lonicera japonica HOM05D005513 ORTHO05D006848 1.0e-19 101.7 77 70.1
Lj6A230T44 Lonicera japonica HOM05D005513 ORTHO05D006848 2.1e-12 77.4 53 71.7
SHI25988 Sapria himalayana HOM05D000105 ORTHO05D000023 2.1e-12 77.4 83 49.4
Lj6A192T18 Lonicera japonica HOM05D005513 ORTHO05D006848 3.6e-12 76.6 57 66.7
SHI25987 Sapria himalayana HOM05D005513 ORTHO05D006848 1.6e-07 61.2 39 64.1


User provided reference genes

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