Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 2.2e-88 328.9 170 100.0
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 3.2e-87 325.1 170 98.2
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 1.2e-86 323.2 170 97.1
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 3.6e-86 321.6 170 96.5
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 6.1e-86 320.9 170 96.5
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 6.1e-86 320.9 170 96.5
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 1.0e-85 320.1 170 96.5
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 1.0e-85 320.1 170 96.5
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 1.4e-85 319.7 170 95.9
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 2.3e-85 318.9 170 95.9
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 6.7e-85 317.4 170 94.7
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 6.7e-85 317.4 170 94.7
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 6.7e-85 317.4 170 95.3
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 8.8e-85 317.0 169 95.3
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 8.8e-85 317.0 170 95.3
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 1.1e-84 316.6 168 95.8
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 1.1e-84 316.6 170 94.7
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 1.5e-84 316.2 170 94.1
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 2.0e-84 315.8 170 94.1
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 2.0e-84 315.8 170 94.1
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 2.6e-84 315.5 169 94.7
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 2.6e-84 315.5 170 93.5
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 2.6e-84 315.5 170 93.5
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 3.3e-84 315.1 170 93.5
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 3.3e-84 315.1 168 95.2
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 3.3e-84 315.1 168 95.2
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 3.3e-84 315.1 168 95.2
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 3.3e-84 315.1 170 94.7
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 3.3e-84 315.1 170 94.7
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 4.4e-84 314.7 170 94.1
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 4.4e-84 314.7 170 94.7
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 4.4e-84 314.7 170 94.1
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 5.7e-84 314.3 170 93.5
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 5.7e-84 314.3 170 93.5
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 9.7e-84 313.5 170 94.7
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 9.7e-84 313.5 170 93.5
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 9.7e-84 313.5 170 92.9
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.3e-83 313.2 170 92.9
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 1.3e-83 313.2 170 93.5
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 1.3e-83 313.2 170 94.1
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 2.8e-83 312.0 170 92.9
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 2.8e-83 312.0 170 92.9
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 4.8e-83 311.2 170 91.8
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 4.8e-83 311.2 170 92.4
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 4.8e-83 311.2 166 94.0
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 1.1e-82 310.1 170 92.4
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 1.1e-82 310.1 169 92.9
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 1.8e-82 309.3 170 91.8
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 1.8e-82 309.3 168 91.1
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 1.8e-82 309.3 170 92.4
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 2.4e-82 308.9 170 91.8
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 2.4e-82 308.9 170 92.4
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 4.1e-82 308.1 176 91.5
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 7.0e-82 307.4 170 91.2
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 7.0e-82 307.4 170 91.2
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 7.0e-82 307.4 170 91.2
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 9.1e-82 307.0 170 91.2
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 1.6e-81 306.2 170 91.2
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 2.6e-81 305.4 183 88.0
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 7.7e-81 303.9 170 90.0
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 1.0e-80 303.5 183 87.4
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 1.7e-80 302.8 170 91.8
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 2.9e-80 302.0 168 90.5
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 3.8e-80 301.6 166 91.6
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 8.5e-80 300.4 169 91.7
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 1.1e-79 300.1 167 89.8
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.9e-79 299.3 170 91.8
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 3.2e-79 298.5 190 84.7
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 7.2e-79 297.4 169 90.5
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 1.2e-78 296.6 170 87.1
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 1.2e-78 296.6 188 81.9
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 4.7e-78 294.7 162 94.4
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 3.0e-77 292.0 157 94.3
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 4.0e-77 291.6 151 98.7
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 4.0e-77 291.6 168 87.5
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 5.2e-77 291.2 157 93.0
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 4.4e-76 288.1 167 86.2
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 2.2e-75 285.8 175 87.4
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 1.1e-74 283.5 150 95.3
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 1.2e-73 280.0 147 97.3
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 1.6e-73 279.6 151 92.7
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 3.5e-73 278.5 147 95.9
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 2.9e-72 275.4 164 84.8
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 5.5e-71 271.2 147 93.9
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 1.8e-69 266.2 140 95.0
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 4.0e-69 265.0 169 76.9
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 3.4e-68 261.9 139 94.2
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 1.7e-67 259.6 139 93.5
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 8.3e-67 257.3 140 91.4
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 8.3e-67 257.3 170 80.6
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 1.1e-66 256.9 262 58.8
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 1.4e-66 256.5 139 92.1
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 2.0e-65 252.7 164 81.7
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 1.6e-62 243.0 128 95.3
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 2.1e-62 242.7 170 77.6
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 3.0e-61 238.8 170 75.9
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 1.2e-60 236.9 130 93.1
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 3.4e-60 235.3 168 74.4
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 7.0e-58 227.6 233 59.7
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 7.7e-57 224.2 125 92.0
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 1.1e-55 220.3 129 86.0
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.5e-55 219.9 120 93.3
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.5e-55 219.9 120 93.3
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 1.3e-51 206.8 185 67.0
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 1.1e-50 203.8 109 94.5
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 1.4e-50 203.4 169 59.8
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 2.0e-49 199.5 110 91.8
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 1.3e-43 180.3 115 81.7
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 1.9e-42 176.4 176 52.3
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 9.5e-39 164.1 170 56.5
Sed0006533 Sechium edule HOM05D006777 ORTHO05D008360 1.6e-33 146.7 76 96.1
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 3.5e-33 145.6 117 67.5
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 6.0e-33 144.8 75 96.0
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 2.3e-32 142.9 75 94.7
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 5.4e-26 121.7 73 82.2
Cpa.g.c27575.2 Carica papaya HOM05D006777 ORTHO05D008360 9.6e-23 110.9 57 93.0
Cc00_g31310 Coffea canephora HOM05D006777 ORTHO05D008360 2.1e-22 109.8 78 75.6
Cc03_g11170 Coffea canephora HOM05D006777 ORTHO05D008360 9.3e-18 94.4 50 90.0
CSS0011736 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.5e-12 77.0 38 89.5
CSS0009674 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 4.2e-10 68.9 39 82.1
Lj3A409T19 Lonicera japonica HOM05D006777 ORTHO05D008360 1.9e-07 60.1 59 59.3


User provided reference genes

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