Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015156 Sechium edule HOM05D011459 ORTHO05D013640 7.9e-211 736.9 378 100.0
ClCG02G014750 Citrullus lanatus HOM05D008339 ORTHO05D013640 6.4e-120 434.9 364 67.0
Sed0004364 Sechium edule HOM05D011459 ORTHO05D013640 1.0e-69 268.1 346 49.1
MELO3C031526.2 Cucumis melo HOM05D011459 ORTHO05D013640 4.8e-67 259.2 181 74.6
CsaV3_2G007240 Cucumis sativus L. HOM05D008339 ORTHO05D007109 1.8e-66 257.3 179 73.7
MELO3C004164.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.1e-29 135.2 152 53.9
Thecc.05G326500 Theobroma cacao HOM05D011459 ORTHO05D013640 3.2e-26 123.6 173 43.4
QL07p004956 Quercus lobata HOM05D011459 ORTHO05D013640 1.1e-18 98.6 164 40.2
QL07p004996 Quercus lobata HOM05D011459 ORTHO05D013640 2.7e-17 94.0 164 39.6
Sabra13G0004900 Salix brachista HOM05D011459 ORTHO05D013640 6.0e-17 92.8 168 38.1
Thecc.05G326400 Theobroma cacao HOM05D011459 ORTHO05D013640 1.3e-16 91.7 166 40.4
Sed0007759 Sechium edule HOM05D008339 ORTHO05D009712 1.1e-15 88.6 128 40.6
COL.COLO4_05518 Corchorus olitorius HOM05D011459 ORTHO05D013640 1.9e-15 87.8 165 35.8
Thecc.05G326300 Theobroma cacao HOM05D011459 ORTHO05D013640 1.9e-15 87.8 166 35.5
PGR031G3424 Punica granatum HOM05D011459 ORTHO05D013640 1.4e-13 81.6 171 36.3
Sabra13G0004800 Salix brachista HOM05D008339 ORTHO05D009712 1.4e-13 81.6 181 34.8
Potri.005G007100 Populus trichocarpa HOM05D008339 ORTHO05D009712 2.4e-13 80.9 135 37.0
Atru.chr2.222 Acer truncatum HOM05D011459 ORTHO05D013640 3.1e-13 80.5 166 34.3
Sabra05G0006500 Salix brachista HOM05D008339 ORTHO05D009712 9.9e-12 75.5 132 34.8
Sabra05G0018000 Salix brachista HOM05D008339 ORTHO05D009712 1.3e-11 75.1 178 29.8
MELO3C031306.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.9e-11 73.9 134 37.3
ClCG02G014760 Citrullus lanatus HOM05D008339 ORTHO05D009712 6.4e-11 72.8 127 37.0
Cpa.g.sc48.196 Carica papaya HOM05D008339 ORTHO05D009712 2.4e-10 70.9 130 33.8
MELO3C004156.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.4e-10 70.9 133 36.1
Sed0011112 Sechium edule HOM05D008339 ORTHO05D009712 2.4e-10 70.9 109 41.3
TAR362G0829 Trochodendron aralioides HOM05D011459 ORTHO05D013640 2.4e-10 70.9 100 39.0
MELO3C004166.2 Cucumis melo HOM05D008339 ORTHO05D009712 3.2e-10 70.5 133 36.1
Prupe.6G309200 Prunus persica HOM05D008339 ORTHO05D009712 3.2e-10 70.5 174 33.3
MELO3C004168.2 Cucumis melo HOM05D008339 ORTHO05D009712 4.2e-10 70.1 133 36.1
MELO3C031525.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.1e-09 67.8 133 35.3
MELO3C031307.2 Cucumis melo HOM05D008339 ORTHO05D009712 3.5e-09 67.0 133 35.3
Potri.013G005750 Populus trichocarpa HOM05D011459 ORTHO05D013640 1.0e-08 65.5 77 48.1
Prupe.6G309300 Prunus persica HOM05D008339 ORTHO05D009712 8.7e-08 62.4 133 33.8
MD12G1203300 Malus domestica HOM05D008339 ORTHO05D009712 5.6e-07 59.7 134 32.8
PGR004G2081 Punica granatum HOM05D003146 ORTHO05D001819 5.6e-07 59.7 110 32.7
Gorai.007G298200 Gossypium raimondii HOM05D008339 ORTHO05D009712 9.6e-07 58.9 132 31.1
Gohir.D11G276100 Gossypium hirsutum HOM05D008339 ORTHO05D009712 2.8e-06 57.4 132 30.3
Cfa012848 Carpinus fangiana HOM05D008339 ORTHO05D009712 3.6e-06 57.0 141 32.6
Thecc.05G309700 Theobroma cacao HOM05D008339 ORTHO05D009712 4.8e-06 56.6 132 32.6
CANSAT54G0094 Cannabis sativa HOM05D008339 ORTHO05D009712 6.2e-06 56.2 130 34.6
CANSAT54G1683 Cannabis sativa HOM05D008339 ORTHO05D009712 6.2e-06 56.2 130 34.6
Gohir.A11G107700 Gossypium hirsutum HOM05D008191 ORTHO05D010044 6.2e-06 56.2 115 29.6


User provided reference genes

Program Settings