Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015154 Sechium edule HOM05D006906 ORTHO05D008578 5.0e-54 214.2 107 100.0
ClCG11G014950 Citrullus lanatus HOM05D006906 ORTHO05D008578 5.4e-40 167.5 105 81.9
MELO3C003483.2 Cucumis melo HOM05D006906 ORTHO05D008578 1.9e-37 159.1 105 76.2
Ah.05g166860 Amaranthus hybridus HOM05D006906 ORTHO05D008578 1.1e-24 116.7 107 58.9
PGR031G1810 Punica granatum HOM05D006906 ORTHO05D008578 2.4e-24 115.5 89 65.2
Haze_19024 Corylus avellana HOM05D006906 ORTHO05D008578 2.1e-23 112.5 106 59.4
TAR628G1359 Trochodendron aralioides HOM05D006906 ORTHO05D008578 2.7e-23 112.1 93 63.4
EL10Ac1g02326 Beta vulgaris HOM05D006906 ORTHO05D008578 3.5e-23 111.7 101 59.4
Cpa.g.sc160.12 Carica papaya HOM05D006906 ORTHO05D008578 6.0e-23 110.9 111 55.0
CSS0004987 Camellia sinensis var. sinensis HOM05D006906 ORTHO05D008578 1.0e-22 110.2 99 59.6
Manes.18G052450 Manihot esculenta HOM05D006906 ORTHO05D008578 1.3e-22 109.8 119 54.6
Sc26g0004280 Simmondsia chinensis HOM05D006906 ORTHO05D008578 3.0e-22 108.6 88 64.8
Cfa020715 Carpinus fangiana HOM05D006906 ORTHO05D008578 3.9e-22 108.2 109 57.8
Hma1.2p1_1068F.1_g254010 Hydrangea macrophylla HOM05D006906 ORTHO05D008578 3.9e-22 108.2 112 55.4
Duzib116G0218 Durio zibethinus HOM05D006906 ORTHO05D008578 6.7e-22 107.5 93 57.0
Dinv01221 Davidia involucrata HOM05D006906 ORTHO05D008578 1.1e-21 106.7 106 55.7
Duzib116G0588 Durio zibethinus HOM05D006906 ORTHO05D008578 1.1e-21 106.7 97 55.7
Rhsim07G0215600 Rhododendron simsii HOM05D006906 ORTHO05D008578 1.5e-21 106.3 92 56.5
Ciclev10002778m.g Citrus clementina HOM05D006906 ORTHO05D008578 1.9e-21 105.9 104 56.7
TWI56G0746 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 1.9e-21 105.9 106 57.5
AUR62034964 Chenopodium quinoa HOM05D006906 ORTHO05D008578 2.5e-21 105.5 94 56.4
Sabra02G0088700 Salix brachista HOM05D006906 ORTHO05D008578 2.5e-21 105.5 103 57.3
THA.LOC104806946 Tarenaya hassleriana HOM05D006906 ORTHO05D008578 2.5e-21 105.5 97 56.7
Actinidia19594 Actinidia chinensis HOM05D006906 ORTHO05D008578 3.3e-21 105.1 90 60.0
Thecc.08G080900 Theobroma cacao HOM05D006906 ORTHO05D008578 3.3e-21 105.1 100 55.0
CANSAT01G2303 Cannabis sativa HOM05D006906 ORTHO05D008578 5.6e-21 104.4 115 52.2
Phvul.009G113500 Phaseolus vulgaris HOM05D006906 ORTHO05D008578 7.4e-21 104.0 81 65.4
DCAR_012832 Daucus carota HOM05D006906 ORTHO05D008578 9.6e-21 103.6 96 55.2
Duzib093G2206 Durio zibethinus HOM05D006906 ORTHO05D008578 9.6e-21 103.6 95 57.9
Potri.002G112500 Populus trichocarpa HOM05D006906 ORTHO05D008578 9.6e-21 103.6 99 58.6
AUR62035774 Chenopodium quinoa HOM05D006906 ORTHO05D008578 1.6e-20 102.8 108 50.9
QL12p040639 Quercus lobata HOM05D006906 ORTHO05D008578 1.6e-20 102.8 125 50.4
Eucgr.F00111 Eucalyptus grandis HOM05D006906 ORTHO05D008578 2.1e-20 102.4 90 61.1
Gorai.009G224100 Gossypium raimondii HOM05D006906 ORTHO05D008578 2.1e-20 102.4 91 58.2
MSTRG.17420 Avicennia marina HOM05D006906 ORTHO05D008578 3.7e-20 101.7 89 61.8
BcaB08g36735 Brassica carinata HOM05D006906 ORTHO05D008578 3.7e-20 101.7 99 53.5
BolC9t58765H Brassica oleracea HOM05D006906 ORTHO05D008578 3.7e-20 101.7 99 53.5
BcaC04g18752 Brassica carinata HOM05D006906 ORTHO05D008578 6.2e-20 100.9 99 53.5
Gohir.A05G213900 Gossypium hirsutum HOM05D006906 ORTHO05D008578 6.2e-20 100.9 91 57.1
CiPaw.15G153800 Carya illinoinensis HOM05D006906 ORTHO05D008578 8.1e-20 100.5 115 54.8
Thhalv10015071m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 8.1e-20 100.5 99 52.5
Gohir.D05G217300 Gossypium hirsutum HOM05D006906 ORTHO05D008578 8.1e-20 100.5 91 57.1
Aqoxy6G01513 Aquilegia oxysepala HOM05D006906 ORTHO05D008578 1.1e-19 100.1 101 51.5
C09p59250 Brassica napus HOM05D006906 ORTHO05D008578 1.1e-19 100.1 101 54.5
TWI12G0785 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 1.8e-19 99.4 103 61.2
Atru.chr13.910 Acer truncatum HOM05D006906 ORTHO05D008578 2.4e-19 99.0 121 50.4
BcaC03g13555 Brassica carinata HOM05D006906 ORTHO05D008578 2.4e-19 99.0 100 50.0
A10p21600 Brassica napus HOM05D006906 ORTHO05D008578 4.0e-19 98.2 99 51.5
BcaB01g05160 Brassica carinata HOM05D006906 ORTHO05D008578 5.3e-19 97.8 103 51.5
C03p09940 Brassica napus HOM05D006906 ORTHO05D008578 5.3e-19 97.8 106 50.0
BolC3t13482H Brassica oleracea HOM05D006906 ORTHO05D008578 5.3e-19 97.8 103 51.5
BcaB01g04920 Brassica carinata HOM05D006906 ORTHO05D008578 6.9e-19 97.4 105 49.5
BraA03t10177Z Brassica rapa HOM05D006906 ORTHO05D008578 6.9e-19 97.4 107 49.5
A02p04550 Brassica napus HOM05D006906 ORTHO05D008578 9.0e-19 97.1 106 50.9
SGA_v2.0_scaffold152G36871 Striga asiatica HOM05D006906 ORTHO05D008578 1.2e-18 96.7 113 46.9
vmacro04612 Vaccinium macrocarpon HOM05D006906 ORTHO05D008578 1.2e-18 96.7 115 47.8
BolC2t06848H Brassica oleracea HOM05D006906 ORTHO05D008578 1.5e-18 96.3 101 48.5
BraA10t44222Z Brassica rapa HOM05D006906 ORTHO05D008578 1.5e-18 96.3 100 54.0
Prupe.1G543500 Prunus persica HOM05D006906 ORTHO05D008578 1.5e-18 96.3 55 78.2
Carub.0006s1610 Capsella rubella HOM05D006906 ORTHO05D008578 2.0e-18 95.9 99 51.5
Nitab4.5_0001614g0100 Nicotiana tabacum HOM05D006906 ORTHO05D008578 2.0e-18 95.9 70 67.1
Nitab4.5_0002415g0040 Nicotiana tabacum HOM05D006906 ORTHO05D008578 2.0e-18 95.9 112 48.2
SalBow2G0068 Salvia bowleyana HOM05D006906 ORTHO05D008578 2.0e-18 95.9 85 57.6
AL6G28970 Arabidopsis lyrata HOM05D006906 ORTHO05D008578 3.4e-18 95.1 99 51.5
CAN.G416.50 Capsicum annuum HOM05D006906 ORTHO05D008578 4.5e-18 94.7 105 51.4
HanXRQChr16g0510751 Helianthus annuus HOM05D006906 ORTHO05D008578 4.5e-18 94.7 106 47.2
HanXRQChr16g0510761 Helianthus annuus HOM05D006906 ORTHO05D008578 4.5e-18 94.7 106 47.2
AT5G17870 Arabidopsis thaliana HOM05D006906 ORTHO05D008578 5.8e-18 94.4 106 49.1
Glyma.06G089700 Glycine max HOM05D006906 ORTHO05D008578 5.8e-18 94.4 103 52.4
MBI16_g41120_MAGBIO Magnolia biondii HOM05D006906 ORTHO05D008578 5.8e-18 94.4 106 50.0
Os11g0550800 Oryza sativa ssp. japonica HOM05D006906 ORTHO05D008578 5.8e-18 94.4 102 49.0
BraA02t05416Z Brassica rapa HOM05D006906 ORTHO05D008578 7.6e-18 94.0 91 52.7
CDE01G0046 Ceratophyllum demersum HOM05D006906 ORTHO05D008578 9.9e-18 93.6 54 75.9
MD08G1211600 Malus domestica HOM05D006906 ORTHO05D008578 9.9e-18 93.6 88 54.5
Sp6g26380 Schrenkiella parvula HOM05D006906 ORTHO05D008578 9.9e-18 93.6 95 52.6
CARHR195300 Cardamine hirsuta HOM05D006906 ORTHO05D008578 1.3e-17 93.2 99 50.5
RcHm_v2.0_Chr7g0232161 Rosa chinensis HOM05D006906 ORTHO05D008578 1.3e-17 93.2 104 51.0
COL.COLO4_35364 Corchorus olitorius HOM05D006906 ORTHO05D008578 1.7e-17 92.8 69 65.2
Peaxi162Scf00628g00053 Petunia axillaris HOM05D006906 ORTHO05D008578 2.2e-17 92.4 73 63.0
Psat1g221800 Pisum sativum HOM05D006906 ORTHO05D008578 2.2e-17 92.4 107 50.5
TPR.G12407 Trifolium pratense HOM05D006906 ORTHO05D008578 3.8e-17 91.7 92 53.3
Lsat_1_v5_gn_6_108161 Lactuca sativa HOM05D006906 ORTHO05D008578 4.9e-17 91.3 119 48.7
Aa31LG11G11710 Aethionema arabicum HOM05D006906 ORTHO05D008578 6.4e-17 90.9 103 48.5
MD15G1394500 Malus domestica HOM05D006906 ORTHO05D008578 8.4e-17 90.5 106 51.9
Sopen04g030750 Solanum pennellii HOM05D006906 ORTHO05D008578 1.1e-16 90.1 76 61.8
PGSC0003DMG400004936 Solanum tuberosum HOM05D006906 ORTHO05D008578 1.9e-16 89.4 76 60.5
unitig_21.g20623 Utricularia gibba HOM05D006906 ORTHO05D008578 1.9e-16 89.4 110 49.1
ECA246G4410 Erigeron canadensis HOM05D006906 ORTHO05D008578 2.4e-16 89.0 128 43.8
Prupe.3G080900 Prunus persica HOM05D006906 ORTHO05D008578 2.4e-16 89.0 66 68.2
Solyc04g077130.1 Solanum lycopersicum HOM05D006906 ORTHO05D008578 2.4e-16 89.0 110 47.3
ATR0767G231 Amborella trichopoda HOM05D006906 ORTHO05D008578 3.2e-16 88.6 48 79.2
PSO541G5790 Papaver somniferum HOM05D006906 ORTHO05D008578 9.3e-16 87.0 72 59.7
FvH4_5g33440 Fragaria vesca HOM05D006906 ORTHO05D008578 1.2e-15 86.7 82 56.1
FAN18G0347 Fragaria x ananassa HOM05D006906 ORTHO05D008578 1.2e-15 86.7 82 56.1
PSO675G4379 Papaver somniferum HOM05D006906 ORTHO05D008578 1.2e-15 86.7 72 58.3
FAN08G0950 Fragaria x ananassa HOM05D006906 ORTHO05D008578 1.0e-14 83.6 89 53.9
Medtr3g110640 Medicago truncatula HOM05D006906 ORTHO05D008578 2.3e-14 82.4 108 46.3
BcaC04g18751 Brassica carinata HOM05D006906 ORTHO05D008578 1.1e-13 80.1 100 47.0
C09p59230 Brassica napus HOM05D006906 ORTHO05D008578 1.1e-13 80.1 100 47.0
Thhalv10009816m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 7.4e-13 77.4 61 62.3
Manes.05G185700 Manihot esculenta HOM05D006906 ORTHO05D008578 9.6e-13 77.0 105 47.6
BolC9t58763H Brassica oleracea HOM05D006906 ORTHO05D008578 2.1e-12 75.9 94 48.9
HPP92_027715 Vanilla planifolia HOM05D006906 ORTHO05D008578 2.8e-12 75.5 70 54.3
Migut.N02816 Erythranthe guttata HOM05D006906 ORTHO05D008578 3.7e-12 75.1 82 53.7
Nn5g30714 Nelumbo nucifera HOM05D006906 ORTHO05D008578 3.7e-12 75.1 84 48.8
HPP92_027718 Vanilla planifolia HOM05D006906 ORTHO05D008578 4.8e-12 74.7 70 54.3
Prupe.8G111300 Prunus persica HOM05D006906 ORTHO05D008578 8.2e-12 73.9 40 80.0
Mapoly0090s0093 Marchantia polymorpha HOM05D006906 ORTHO05D008578 4.9e-09 64.7 78 46.2
Pp3c3_11690 Physcomitrium patens HOM05D006906 ORTHO05D008578 7.1e-08 60.8 82 48.8
CBR_g48804 Chara braunii HOM05D006906 ORTHO05D008578 6.0e-07 57.8 45 57.8
SMO367G0828 Selaginella moellendorffii HOM05D006906 ORTHO05D008578 1.0e-06 57.0 50 60.0
A03p08530 Brassica napus HOM05D006906 ORTHO05D008578 2.3e-06 55.8 39 61.5
SEGI_12109 Sequoiadendron giganteum HOM05D006906 ORTHO05D008578 5.1e-06 54.7 57 56.1


User provided reference genes

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