Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015064 Sechium edule HOM05D007903 ORTHO05D009925 3.3e-77 291.6 142 100.0
CsaV3_5G034450 Cucumis sativus L. HOM05D007903 ORTHO05D009925 4.1e-35 151.8 138 65.2
ClCG05G022570 Citrullus lanatus HOM05D007903 ORTHO05D009925 8.2e-28 127.5 134 56.0
Haze_00633 Corylus avellana HOM05D007903 ORTHO05D009925 1.6e-26 123.2 160 45.6
Cfa015866 Carpinus fangiana HOM05D007903 ORTHO05D009925 5.5e-24 114.8 160 43.8
TAR374G1449 Trochodendron aralioides HOM05D007903 ORTHO05D009925 8.0e-23 110.9 162 38.3
CSS0015489 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 1.8e-22 109.8 158 41.8
Hma1.2p1_1875F.1_g306260 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 6.8e-22 107.8 162 43.8
Aqoxy3G00252 Aquilegia oxysepala HOM05D007903 ORTHO05D009925 1.5e-21 106.7 166 38.0
CiPaw.05G239700 Carya illinoinensis HOM05D007903 ORTHO05D009925 4.8e-20 101.7 163 37.4
Thecc.02G225400 Theobroma cacao HOM05D007903 ORTHO05D009925 4.8e-20 101.7 167 40.7
Sc04g0006190 Simmondsia chinensis HOM05D007903 ORTHO05D009925 5.4e-19 98.2 161 38.5
Potri.008G122700 Populus trichocarpa HOM05D007903 ORTHO05D009925 2.0e-18 96.3 157 39.5
PGSC0003DMG400006002 Solanum tuberosum HOM05D007903 ORTHO05D009925 3.5e-18 95.5 165 38.8
Sabra08G0093200 Salix brachista HOM05D007903 ORTHO05D009925 4.5e-18 95.1 147 42.2
Potri.010G122600 Populus trichocarpa HOM05D007903 ORTHO05D009925 5.9e-18 94.7 165 38.2
Ciclev10017603m.g Citrus clementina HOM05D007903 ORTHO05D009925 7.7e-18 94.4 172 38.4
CAN.G25.18 Capsicum annuum HOM05D007903 ORTHO05D009925 5.0e-17 91.7 169 39.1
CSS0009081 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 1.1e-16 90.5 144 38.9
Manes.14G104700 Manihot esculenta HOM05D007903 ORTHO05D009925 1.1e-16 90.5 159 39.0
CANSAT01G0431 Cannabis sativa HOM05D007903 ORTHO05D009925 2.5e-16 89.4 170 38.2
Nn4g23903 Nelumbo nucifera HOM05D007903 ORTHO05D009925 3.3e-16 89.0 173 34.7
TWI31G0067 Tripterygium wilfordii HOM05D007903 ORTHO05D009925 4.2e-16 88.6 165 40.0
FAN17G2767 Fragaria x ananassa HOM05D007903 ORTHO05D009925 6.1e-15 84.7 171 36.8
MD16G1040300 Malus domestica HOM05D007903 ORTHO05D009925 1.0e-14 84.0 165 34.5
CSS0036148 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 1.4e-14 83.6 144 36.8
Sabra10G0092700 Salix brachista HOM05D007903 ORTHO05D009925 1.8e-14 83.2 166 36.1
Duzib268G0450 Durio zibethinus HOM05D007903 ORTHO05D009925 2.3e-14 82.8 166 37.3
FvH4_4g27040 Fragaria vesca HOM05D007903 ORTHO05D009925 4.0e-14 82.0 173 37.0
FAN07G0160 Fragaria x ananassa HOM05D007903 ORTHO05D009925 4.0e-14 82.0 170 37.1
FAN12G1984 Fragaria x ananassa HOM05D007903 ORTHO05D009925 4.0e-14 82.0 173 37.0
Gohir.A09G042700 Gossypium hirsutum HOM05D007903 ORTHO05D009925 4.0e-14 82.0 165 37.0
FAN22G0942 Fragaria x ananassa HOM05D007903 ORTHO05D009925 6.8e-14 81.3 174 36.2
Prupe.1G313800 Prunus persica HOM05D007903 ORTHO05D009925 6.8e-14 81.3 167 35.3
FAN12G2568 Fragaria x ananassa HOM05D007903 ORTHO05D009925 1.2e-13 80.5 173 36.4
THA.LOC104821918 Tarenaya hassleriana HOM05D007903 ORTHO05D009925 1.5e-13 80.1 163 36.8
MD13G1039400 Malus domestica HOM05D007903 ORTHO05D009925 2.0e-13 79.7 164 32.9
Solyc04g007360.1 Solanum lycopersicum HOM05D007903 ORTHO05D009925 2.0e-13 79.7 165 35.8
RcHm_v2.0_Chr4g0434841 Rosa chinensis HOM05D007903 ORTHO05D009925 3.4e-13 79.0 171 34.5
Hma1.2p1_2787F.1_g328510 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 4.4e-13 78.6 138 39.9
Gorai.006G050300 Gossypium raimondii HOM05D007903 ORTHO05D009925 5.7e-13 78.2 170 36.5
Gohir.D09G043400 Gossypium hirsutum HOM05D007903 ORTHO05D009925 7.5e-13 77.8 170 35.9
Lj5g0001705 Lotus japonicus HOM05D007903 ORTHO05D009925 9.8e-13 77.4 169 35.5
DCAR_030171 Daucus carota HOM05D007903 ORTHO05D009925 4.9e-12 75.1 159 30.2
Peaxi162Scf00564g00039 Petunia axillaris HOM05D007903 ORTHO05D009925 4.9e-12 75.1 128 37.5
BcaB03g15412 Brassica carinata HOM05D007903 ORTHO05D009925 2.4e-11 72.8 162 33.3
Lalb_Chr06g0165971 Lupinus albus HOM05D007903 ORTHO05D009925 3.1e-11 72.4 158 31.0
Oeu057730.1 Olea europaea HOM05D007903 ORTHO05D009925 4.1e-11 72.0 147 34.0
PGR119G1971 Punica granatum HOM05D007903 ORTHO05D009925 4.1e-11 72.0 162 33.3
QL01p040711 Quercus lobata HOM05D007903 ORTHO05D009925 7.0e-11 71.2 137 34.3
Glyma.20G117500 Glycine max HOM05D007903 ORTHO05D009925 1.6e-10 70.1 137 34.3
Carub.0002s1485 Capsella rubella HOM05D007903 ORTHO05D009925 2.0e-10 69.7 160 34.4
Thhalv10019802m.g Eutrema salsugineum HOM05D007903 ORTHO05D009925 2.7e-10 69.3 165 33.3
Lsat_1_v5_gn_3_57941 Lactuca sativa HOM05D007903 ORTHO05D009925 5.9e-10 68.2 105 44.8
BcaC08g45975 Brassica carinata HOM05D007903 ORTHO05D009925 1.0e-09 67.4 161 33.5
C06p37650 Brassica napus HOM05D007903 ORTHO05D009925 1.0e-09 67.4 161 33.5
BolC6t38868H Brassica oleracea HOM05D007903 ORTHO05D009925 1.0e-09 67.4 161 33.5
Cpa.g.sc65.47 Carica papaya HOM05D007903 ORTHO05D009925 1.0e-09 67.4 168 36.9
AT1G68350 Arabidopsis thaliana HOM05D007903 ORTHO05D009925 1.3e-09 67.0 162 31.5
Migut.E00359 Erythranthe guttata HOM05D007903 ORTHO05D009925 1.3e-09 67.0 146 34.9
Sp5g23400 Schrenkiella parvula HOM05D007903 ORTHO05D009925 2.3e-09 66.2 159 33.3
AL2G27200 Arabidopsis lyrata HOM05D007903 ORTHO05D009925 5.0e-09 65.1 159 34.0
BcaB05g24366 Brassica carinata HOM05D007903 ORTHO05D009925 5.0e-09 65.1 161 31.7
MELO3C012262.2 Cucumis melo HOM05D007903 ORTHO05D009925 6.6e-09 64.7 47 70.2
Eucgr.G02306 Eucalyptus grandis HOM05D007903 ORTHO05D009925 8.6e-09 64.3 163 33.7
TWI79G1550 Tripterygium wilfordii HOM05D007903 ORTHO05D009925 3.3e-08 62.4 144 36.1
CARHR061060 Cardamine hirsuta HOM05D007903 ORTHO05D009925 5.6e-08 61.6 161 32.9
Sopen04g002420 Solanum pennellii HOM05D007903 ORTHO05D009925 5.6e-08 61.6 129 33.3
COL.COLO4_08991 Corchorus olitorius HOM05D007903 ORTHO05D009925 1.6e-07 60.1 140 37.1
VMungo0720G0077 Vigna mungo HOM05D007903 ORTHO05D009925 2.1e-07 59.7 164 30.5
BraA02t06557Z Brassica rapa HOM05D007903 ORTHO05D009925 6.8e-06 54.7 167 31.7
EL10Ac6g14355 Beta vulgaris HOM05D007903 ORTHO05D009925 8.9e-06 54.3 104 34.6


User provided reference genes

Program Settings