Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015045 Sechium edule HOM05D005547 ORTHO05D006887 7.0e-50 200.3 100 100.0
Sed0021722 Sechium edule HOM05D005547 ORTHO05D006887 9.2e-50 199.9 100 99.0
ClCG11G000640 Citrullus lanatus HOM05D005547 ORTHO05D006887 2.4e-42 175.3 100 89.0
Rhsim09G0081900 Rhododendron simsii HOM05D005547 ORTHO05D006887 6.0e-41 170.6 105 81.9
Nitab4.5_0001091g0130 Nicotiana tabacum HOM05D005547 ORTHO05D006887 6.6e-40 167.2 105 79.0
CAN.G458.10 Capsicum annuum HOM05D005547 ORTHO05D006887 1.1e-39 166.4 102 83.3
MELO3C022540.2 Cucumis melo HOM05D005547 ORTHO05D006887 1.1e-39 166.4 100 85.0
Nitab4.5_0000129g0490 Nicotiana tabacum HOM05D005547 ORTHO05D006887 1.1e-39 166.4 105 78.1
Ciclev10017277m.g Citrus clementina HOM05D005547 ORTHO05D006887 2.5e-39 165.2 107 80.4
Manes.17G091700 Manihot esculenta HOM05D005547 ORTHO05D006887 2.5e-39 165.2 103 79.6
Ca_11205_v3 Cicer arietinum L. HOM05D005547 ORTHO05D006887 3.3e-39 164.9 103 79.6
Solyc04g008490.2 Solanum lycopersicum HOM05D005547 ORTHO05D006887 3.3e-39 164.9 102 83.3
Sopen04g003640 Solanum pennellii HOM05D005547 ORTHO05D006887 3.3e-39 164.9 102 83.3
TWI53G0286 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 7.3e-39 163.7 107 80.4
TWI77G0905 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 1.2e-38 162.9 107 78.5
CANSAT78G0133 Cannabis sativa HOM05D005547 ORTHO05D006887 1.6e-38 162.5 101 80.2
COL.COLO4_27546 Corchorus olitorius HOM05D005547 ORTHO05D006887 1.6e-38 162.5 100 83.0
Nitab4.5_0003889g0030 Nicotiana tabacum HOM05D005547 ORTHO05D006887 2.1e-38 162.2 100 80.0
Atru.chr11.1034 Acer truncatum HOM05D005547 ORTHO05D006887 2.8e-38 161.8 101 80.2
Manes.15G140700 Manihot esculenta HOM05D005547 ORTHO05D006887 2.8e-38 161.8 103 78.6
PSO063G0668 Papaver somniferum HOM05D005547 ORTHO05D006887 2.8e-38 161.8 101 79.2
QL03p040577 Quercus lobata HOM05D005547 ORTHO05D006887 2.8e-38 161.8 100 79.0
QL03p040948 Quercus lobata HOM05D005547 ORTHO05D006887 2.8e-38 161.8 100 79.0
TWI77G0558 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 2.8e-38 161.8 107 77.6
Duzib248G0639 Durio zibethinus HOM05D005547 ORTHO05D006887 4.7e-38 161.0 103 77.7
Duzib268G1003 Durio zibethinus HOM05D005547 ORTHO05D006887 4.7e-38 161.0 103 79.6
Gohir.A03G114100 Gossypium hirsutum HOM05D005547 ORTHO05D006887 6.2e-38 160.6 103 80.6
Oeu024849.1 Olea europaea HOM05D005547 ORTHO05D006887 6.2e-38 160.6 103 77.7
Psat6g231800 Pisum sativum HOM05D005547 ORTHO05D006887 6.2e-38 160.6 103 78.6
Migut.D01210 Erythranthe guttata HOM05D005547 ORTHO05D006887 8.1e-38 160.2 106 77.4
Gorai.005G154900 Gossypium raimondii HOM05D005547 ORTHO05D006887 8.1e-38 160.2 103 80.6
Gorai.005G155000 Gossypium raimondii HOM05D005547 ORTHO05D006887 8.1e-38 160.2 103 80.6
MSTRG.13653 Avicennia marina HOM05D005547 ORTHO05D006887 1.1e-37 159.8 101 79.2
Eucgr.B02628 Eucalyptus grandis HOM05D005547 ORTHO05D006887 1.1e-37 159.8 107 74.8
Gohir.D02G138400 Gossypium hirsutum HOM05D005547 ORTHO05D006887 1.4e-37 159.5 103 80.6
PSO782G2712 Papaver somniferum HOM05D005547 ORTHO05D006887 1.4e-37 159.5 101 77.2
THA.LOC104824108 Tarenaya hassleriana HOM05D005547 ORTHO05D006887 1.4e-37 159.5 101 78.2
CSS0022085 Camellia sinensis var. sinensis HOM05D005547 ORTHO05D006887 1.8e-37 159.1 102 80.4
CSS0041328 Camellia sinensis var. sinensis HOM05D005547 ORTHO05D006887 1.8e-37 159.1 102 80.4
Cpa.g.sc2.79 Carica papaya HOM05D005547 ORTHO05D006887 1.8e-37 159.1 105 78.1
Cfa015074 Carpinus fangiana HOM05D005547 ORTHO05D006887 1.8e-37 159.1 99 79.8
CiPaw.06G057000 Carya illinoinensis HOM05D005547 ORTHO05D006887 1.8e-37 159.1 101 82.2
Duzib251G0939 Durio zibethinus HOM05D005547 ORTHO05D006887 1.8e-37 159.1 103 78.6
SGA_v2.0_scaffold65G22157 Striga asiatica HOM05D005547 ORTHO05D006887 1.8e-37 159.1 102 78.4
Thecc.02G300400 Theobroma cacao HOM05D005547 ORTHO05D006887 1.8e-37 159.1 103 78.6
Ah.03g147190 Amaranthus hybridus HOM05D005547 ORTHO05D006887 3.1e-37 158.3 100 78.0
Gohir.D02G138500 Gossypium hirsutum HOM05D005547 ORTHO05D006887 3.1e-37 158.3 103 79.6
BcaB07g30360 Brassica carinata HOM05D005547 ORTHO05D006887 4.0e-37 157.9 104 76.9
BcaC04g21537 Brassica carinata HOM05D005547 ORTHO05D006887 4.0e-37 157.9 103 77.7
A09p23740 Brassica napus HOM05D005547 ORTHO05D006887 4.0e-37 157.9 103 77.7
C09p30580 Brassica napus HOM05D005547 ORTHO05D006887 4.0e-37 157.9 103 77.7
BolC9t55922H Brassica oleracea HOM05D005547 ORTHO05D006887 4.0e-37 157.9 103 77.7
BraA09t37975Z Brassica rapa HOM05D005547 ORTHO05D006887 4.0e-37 157.9 103 77.7
Thhalv10005178m.g Eutrema salsugineum HOM05D005547 ORTHO05D006887 4.0e-37 157.9 103 77.7
Sp2g13460 Schrenkiella parvula HOM05D005547 ORTHO05D006887 4.0e-37 157.9 103 77.7
TPR.G2488 Trifolium pratense HOM05D005547 ORTHO05D006887 4.0e-37 157.9 107 74.8
BcaC06g34084 Brassica carinata HOM05D005547 ORTHO05D006887 5.2e-37 157.5 103 77.7
C07p32870 Brassica napus HOM05D005547 ORTHO05D006887 5.2e-37 157.5 103 77.7
BolC7t43802H Brassica oleracea HOM05D005547 ORTHO05D006887 5.2e-37 157.5 103 77.7
Lalb_Chr02g0143381 Lupinus albus HOM05D005547 ORTHO05D006887 5.2e-37 157.5 104 79.8
Lalb_Chr21g0306901 Lupinus albus HOM05D005547 ORTHO05D006887 5.2e-37 157.5 106 75.5
Medtr1g112480 Medicago truncatula HOM05D005547 ORTHO05D006887 5.2e-37 157.5 106 75.5
A06p43870 Brassica napus HOM05D005547 ORTHO05D006887 6.8e-37 157.1 103 76.7
BraA06t27263Z Brassica rapa HOM05D005547 ORTHO05D006887 6.8e-37 157.1 103 76.7
Haze_11478 Corylus avellana HOM05D005547 ORTHO05D006887 8.9e-37 156.8 100 80.0
Phvul.007G019800 Phaseolus vulgaris HOM05D005547 ORTHO05D006887 8.9e-37 156.8 100 78.0
Glyma.20G108500 Glycine max HOM05D005547 ORTHO05D006887 1.2e-36 156.4 100 77.0
HanXRQChr12g0365891 Helianthus annuus HOM05D005547 ORTHO05D006887 1.2e-36 156.4 100 74.0
MD13G1013300 Malus domestica HOM05D005547 ORTHO05D006887 1.5e-36 156.0 106 76.4
Potri.010G099900 Populus trichocarpa HOM05D005547 ORTHO05D006887 1.5e-36 156.0 105 78.1
BcaC06g31254 Brassica carinata HOM05D005547 ORTHO05D006887 2.0e-36 155.6 103 76.7
BcaC06g31255 Brassica carinata HOM05D005547 ORTHO05D006887 2.0e-36 155.6 103 76.7
Lsat_1_v5_gn_5_36641 Lactuca sativa HOM05D005547 ORTHO05D006887 2.0e-36 155.6 100 75.0
MBI06_g29243_MAGBIO Magnolia biondii HOM05D005547 ORTHO05D006887 2.0e-36 155.6 100 75.0
PGR142G0372 Punica granatum HOM05D005547 ORTHO05D006887 2.0e-36 155.6 100 78.0
Prupe.1G340400 Prunus persica HOM05D005547 ORTHO05D006887 2.6e-36 155.2 103 74.8
TAR295G0002 Trochodendron aralioides HOM05D005547 ORTHO05D006887 2.6e-36 155.2 103 75.7
TAR622G1295 Trochodendron aralioides HOM05D005547 ORTHO05D006887 2.6e-36 155.2 103 75.7
ATR0807G170 Amborella trichopoda HOM05D005547 ORTHO05D006887 3.4e-36 154.8 100 74.0
Nn8g41124 Nelumbo nucifera HOM05D005547 ORTHO05D006887 3.4e-36 154.8 101 76.2
Peaxi162Scf00025g00059 Petunia axillaris HOM05D005547 ORTHO05D006887 5.8e-36 154.1 88 84.1
Sabra10G0072400 Salix brachista HOM05D005547 ORTHO05D006887 5.8e-36 154.1 105 77.1
MD16G1010200 Malus domestica HOM05D005547 ORTHO05D006887 7.6e-36 153.7 106 74.5
Potri.008G141900 Populus trichocarpa HOM05D005547 ORTHO05D006887 7.6e-36 153.7 105 77.1
DCAR_002637 Daucus carota HOM05D005547 ORTHO05D006887 1.7e-35 152.5 94 79.8
Hma1.2p1_0068F.1_g037220 Hydrangea macrophylla HOM05D005547 ORTHO05D006887 1.7e-35 152.5 96 78.1
THA.LOC104805110 Tarenaya hassleriana HOM05D005547 ORTHO05D006887 1.7e-35 152.5 101 76.2
A02p32590 Brassica napus HOM05D005547 ORTHO05D006887 2.2e-35 152.1 103 74.8
MSTRG.2096 Avicennia marina HOM05D005547 ORTHO05D006887 3.8e-35 151.4 101 72.3
Sabra08G0107500 Salix brachista HOM05D005547 ORTHO05D006887 3.8e-35 151.4 100 75.0
unitig_699.g19647 Utricularia gibba HOM05D005547 ORTHO05D006887 3.8e-35 151.4 101 73.3
Gohir.A03G114000 Gossypium hirsutum HOM05D005547 ORTHO05D006887 4.9e-35 151.0 103 76.7
MBI06_g19635_MAGBIO Magnolia biondii HOM05D005547 ORTHO05D006887 4.9e-35 151.0 96 75.0
Sc03g0005980 Simmondsia chinensis HOM05D005547 ORTHO05D006887 6.4e-35 150.6 100 75.0
Carub.0005s0107 Capsella rubella HOM05D005547 ORTHO05D006887 8.4e-35 150.2 103 73.8
CARHR144680 Cardamine hirsuta HOM05D005547 ORTHO05D006887 1.4e-34 149.4 103 73.8
Lj5g0000051 Lotus japonicus HOM05D005547 ORTHO05D006887 1.9e-34 149.1 100 76.0
Ah.02g120230 Amaranthus hybridus HOM05D005547 ORTHO05D006887 7.1e-34 147.1 100 74.0
AL5G11260 Arabidopsis lyrata HOM05D005547 ORTHO05D006887 7.1e-34 147.1 104 72.1
BcaB07g30717 Brassica carinata HOM05D005547 ORTHO05D006887 1.2e-33 146.4 87 80.5
BcaB07g30718 Brassica carinata HOM05D005547 ORTHO05D006887 1.2e-33 146.4 87 80.5
SalBow2G0745 Salvia bowleyana HOM05D005547 ORTHO05D006887 1.6e-33 146.0 95 77.9
Zm00001eb002320 Zea mays HOM05D005547 ORTHO05D006887 1.6e-33 146.0 95 74.7
FAN07G0567 Fragaria x ananassa HOM05D005547 ORTHO05D006887 2.7e-33 145.2 106 69.8
FAN17G0411 Fragaria x ananassa HOM05D005547 ORTHO05D006887 2.7e-33 145.2 106 69.8
FvH4_4g35970 Fragaria vesca HOM05D005547 ORTHO05D006887 3.5e-33 144.8 106 69.8
FAN12G1717 Fragaria x ananassa HOM05D005547 ORTHO05D006887 3.5e-33 144.8 106 69.8
SHI04242 Sapria himalayana HOM05D005547 ORTHO05D006887 4.6e-33 144.4 105 69.5
Nitab4.5_0000944g0080 Nicotiana tabacum HOM05D005547 ORTHO05D006887 6.0e-33 144.1 73 91.8
Aa31LG2G7900 Aethionema arabicum HOM05D000012 ORTHO05D000567 7.8e-33 143.7 85 83.5
AT2G02050 Arabidopsis thaliana HOM05D005547 ORTHO05D006887 7.8e-33 143.7 104 71.2
FAN22G0273 Fragaria x ananassa HOM05D005547 ORTHO05D006887 7.8e-33 143.7 106 68.9
RcHm_v2.0_Chr4g0445601 Rosa chinensis HOM05D005547 ORTHO05D006887 7.8e-33 143.7 103 71.8
HPP92_022540 Vanilla planifolia HOM05D005547 ORTHO05D006887 1.0e-32 143.3 88 79.5
Os03g0129900 Oryza sativa ssp. japonica HOM05D005547 ORTHO05D006887 5.1e-32 141.0 97 71.1
AUR62003480 Chenopodium quinoa HOM05D005547 ORTHO05D006887 1.3e-30 136.3 91 74.7
AUR62017789 Chenopodium quinoa HOM05D005547 ORTHO05D006887 2.1e-30 135.6 91 73.6
MD17G1273300 Malus domestica HOM05D005547 ORTHO05D006887 3.4e-28 128.3 73 82.2
Cc11_g05010 Coffea canephora HOM05D005547 ORTHO05D006887 7.6e-28 127.1 69 84.1
ECA233G2357 Erigeron canadensis HOM05D005547 ORTHO05D006887 7.6e-28 127.1 74 75.7
arahy.Tifrunner.gnm1.ann1.VES97W Arachis hypogaea HOM05D005547 ORTHO05D006887 1.3e-27 126.3 70 80.0
Mapoly0058s0109 Marchantia polymorpha HOM05D005547 ORTHO05D006887 5.6e-23 110.9 70 71.4
Haze_10731 Corylus avellana HOM05D005547 ORTHO05D006887 4.8e-22 107.8 84 65.5
Pp3c14_25130 Physcomitrium patens HOM05D005547 ORTHO05D006887 4.8e-22 107.8 73 64.4
Pp3c10_11190 Physcomitrium patens HOM05D005547 ORTHO05D006887 2.4e-21 105.5 69 65.2
arahy.Tifrunner.gnm1.ann1.FEK9G3 Arachis hypogaea HOM05D005547 ORTHO05D006887 4.9e-19 97.8 86 53.5
C02p50170 Brassica napus HOM05D005547 ORTHO05D006887 1.9e-18 95.9 68 69.1
BolC2t11096H Brassica oleracea HOM05D005547 ORTHO05D006887 1.9e-18 95.9 68 69.1
GSVIVG01000609001 Vitis vinifera HOM05D005547 ORTHO05D006887 2.4e-18 95.5 57 77.2
CBR_g4786 Chara braunii HOM05D005547 ORTHO05D006887 6.0e-17 90.9 75 52.0
BcaC03g17109 Brassica carinata HOM05D005547 ORTHO05D006887 7.9e-17 90.5 54 75.9
SMO356G0087 Selaginella moellendorffii HOM05D005547 ORTHO05D006887 1.0e-16 90.1 65 60.0
MCO06G054 Micromonas commoda HOM05D005547 ORTHO05D006887 7.4e-15 84.0 55 61.8
Gorai.002G169600 Gossypium raimondii HOM05D005547 ORTHO05D006887 1.6e-14 82.8 103 50.5
Glyma.14G132200 Glycine max HOM05D005547 ORTHO05D006887 4.8e-14 81.3 101 50.5
PRCOL_00006370 Prasinoderma coloniale HOM05D005547 ORTHO05D006887 3.0e-08 62.0 67 44.8


User provided reference genes

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