Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 7.5e-98 360.5 185 100.0
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 7.1e-80 300.8 187 82.4
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 1.3e-76 290.0 188 80.9
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 4.8e-76 288.1 188 81.4
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 8.4e-57 224.2 187 60.4
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 1.1e-53 213.8 183 61.2
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 5.7e-53 211.5 193 60.1
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 9.6e-53 210.7 195 59.5
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 1.3e-52 210.3 193 60.1
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 2.8e-52 209.1 185 59.5
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.1e-51 207.2 191 57.6
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 1.8e-51 206.5 190 60.0
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 2.4e-51 206.1 193 58.5
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 3.1e-51 205.7 187 59.9
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 5.3e-51 204.9 193 57.5
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 9.0e-51 204.1 188 59.6
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 9.0e-51 204.1 185 58.4
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 1.2e-50 203.8 188 60.1
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 1.2e-50 203.8 178 60.1
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 1.5e-50 203.4 186 59.1
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 2.0e-50 203.0 192 58.3
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 2.0e-50 203.0 180 59.4
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 2.6e-50 202.6 193 56.0
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 4.5e-50 201.8 181 55.8
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 4.5e-50 201.8 184 62.0
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 4.5e-50 201.8 197 55.8
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 5.9e-50 201.4 193 57.0
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 1.0e-49 200.7 185 57.8
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 1.0e-49 200.7 187 59.4
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 1.0e-49 200.7 185 58.4
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 1.3e-49 200.3 193 56.5
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 1.3e-49 200.3 191 59.7
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 1.7e-49 199.9 183 58.5
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 2.9e-49 199.1 187 56.7
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 3.8e-49 198.7 187 57.2
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 5.0e-49 198.4 181 55.2
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 5.0e-49 198.4 181 55.2
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 5.0e-49 198.4 187 57.8
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 1.1e-48 197.2 183 55.7
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 1.1e-48 197.2 183 57.4
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 1.9e-48 196.4 183 55.7
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 3.2e-48 195.7 195 57.4
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 3.2e-48 195.7 190 56.3
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 4.2e-48 195.3 183 57.9
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 4.2e-48 195.3 184 58.2
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 5.5e-48 194.9 189 57.7
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 7.2e-48 194.5 193 56.0
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 9.3e-48 194.1 185 56.2
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 1.2e-47 193.7 192 54.7
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 1.2e-47 193.7 196 54.6
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 1.6e-47 193.4 193 54.4
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.1e-47 193.0 181 54.1
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 3.6e-47 192.2 189 57.1
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 6.1e-47 191.4 181 54.1
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 6.1e-47 191.4 190 54.7
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 1.0e-46 190.7 139 67.6
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 2.3e-46 189.5 189 53.4
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 2.3e-46 189.5 196 54.6
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 3.0e-46 189.1 181 53.6
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 6.7e-46 188.0 185 55.1
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 6.7e-46 188.0 181 52.5
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 8.7e-46 187.6 189 52.9
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 8.7e-46 187.6 189 52.9
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 8.7e-46 187.6 194 53.1
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 1.1e-45 187.2 188 55.3
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 1.5e-45 186.8 192 53.1
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 2.5e-45 186.0 189 52.4
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 2.5e-45 186.0 189 53.4
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 2.5e-45 186.0 191 54.5
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 5.7e-45 184.9 193 52.3
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 7.4e-45 184.5 189 52.4
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 7.4e-45 184.5 189 52.4
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 7.4e-45 184.5 193 55.4
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 2.8e-44 182.6 190 52.6
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 4.8e-44 181.8 191 52.9
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 6.3e-44 181.4 187 52.9
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 1.1e-43 180.6 189 52.4
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 1.1e-43 180.6 192 52.6
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 1.1e-43 180.6 129 69.8
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 1.4e-43 180.3 189 53.4
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 2.4e-43 179.5 188 51.6
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 5.3e-43 178.3 190 51.6
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 5.3e-43 178.3 224 49.6
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 1.2e-42 177.2 188 52.1
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 1.5e-42 176.8 184 52.7
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 2.0e-42 176.4 184 51.6
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 2.0e-42 176.4 184 51.6
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 2.0e-42 176.4 184 51.6
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 2.6e-42 176.0 130 63.1
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 7.7e-42 174.5 195 51.3
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 7.7e-42 174.5 192 49.5
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 6.5e-41 171.4 190 49.5
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 4.6e-39 165.2 113 68.1
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 3.9e-38 162.2 179 49.2
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 5.1e-38 161.8 133 60.2
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 3.3e-37 159.1 126 56.3
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 3.7e-36 155.6 113 65.5
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 4.8e-36 155.2 112 67.0
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 1.1e-35 154.1 165 50.9
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 1.8e-35 153.3 165 50.3
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 3.1e-35 152.5 186 42.5
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 3.4e-34 149.1 192 46.4
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 1.1e-32 144.1 125 53.6
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 1.4e-32 143.7 187 46.0
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 2.0e-29 133.3 189 39.7
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 9.7e-29 131.0 128 53.9
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 3.7e-28 129.0 193 38.9
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 8.2e-28 127.9 92 66.3
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 7.7e-26 121.3 128 46.9
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 8.5e-25 117.9 83 65.1
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 4.2e-24 115.5 99 52.5
MD13G1169900 Malus domestica HOM05D006081 ORTHO05D007628 9.4e-24 114.4 128 53.1
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 2.7e-23 112.8 95 50.5
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 6.7e-22 108.2 176 39.8
Actinidia01470 Actinidia chinensis HOM05D006081 ORTHO05D007628 7.5e-21 104.8 185 40.0
CSS0011440 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.2e-18 97.4 109 50.5
Potri.010G024000 Populus trichocarpa HOM05D006081 ORTHO05D007628 3.5e-18 95.9 66 66.7
Haze_01225 Corylus avellana HOM05D006081 ORTHO05D007628 1.0e-17 94.4 99 55.6
Mapoly0041s0011 Marchantia polymorpha HOM05D006081 ORTHO05D007628 1.0e-14 84.3 120 40.0
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 1.5e-13 80.5 122 36.1
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 2.4e-11 73.2 168 28.0
CBR_g29894 Chara braunii HOM05D008095 ORTHO05D010826 5.4e-11 72.0 121 32.2
FAN22G0279 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.0e-10 70.1 86 46.5
Nn5g30060 Nelumbo nucifera HOM05D006081 ORTHO05D007628 2.0e-10 70.1 101 46.5
BolC7t43135H Brassica oleracea HOM05D006081 ORTHO05D033520 4.0e-06 55.8 39 69.2


User provided reference genes

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