Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 3.1e-229 798.1 399 100.0
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 3.4e-204 714.9 398 89.4
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 7.6e-188 660.6 398 83.4
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 4.2e-178 628.2 379 81.5
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 6.0e-177 624.4 372 82.0
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 1.3e-176 623.2 382 80.9
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 5.1e-176 621.3 401 77.6
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 2.5e-175 619.0 381 79.8
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 7.4e-175 617.5 378 80.4
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 7.4e-175 617.5 348 84.8
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 2.1e-174 615.9 375 80.5
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 2.1e-174 615.9 347 84.1
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 2.8e-174 615.5 382 79.8
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 3.7e-174 615.1 383 79.1
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 4.8e-174 614.8 401 76.8
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 4.8e-174 614.8 348 82.5
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 3.1e-173 612.1 378 79.4
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 3.1e-173 612.1 375 79.7
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 4.0e-173 611.7 383 79.1
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 4.0e-173 611.7 381 80.1
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 5.3e-173 611.3 380 80.0
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 1.2e-172 610.1 387 77.3
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 1.2e-172 610.1 383 80.2
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 3.4e-172 608.6 388 77.8
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 4.5e-172 608.2 346 84.1
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 1.7e-171 606.3 382 77.2
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 2.2e-171 605.9 389 78.1
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 2.9e-171 605.5 347 83.9
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 5.0e-171 604.7 348 83.3
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 1.4e-170 603.2 380 76.6
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 2.5e-170 602.4 346 83.8
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 4.2e-170 601.7 380 77.9
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 5.5e-170 601.3 375 78.1
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 5.5e-170 601.3 375 78.7
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 1.2e-169 600.1 357 81.0
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 1.6e-169 599.7 347 84.4
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 2.1e-169 599.4 399 75.7
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 2.7e-169 599.0 376 78.2
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 4.6e-169 598.2 350 82.9
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 4.6e-169 598.2 353 80.5
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 1.3e-168 596.7 379 76.5
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 2.3e-168 595.9 350 81.4
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 2.3e-168 595.9 383 76.0
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 2.3e-168 595.9 387 76.0
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 3.0e-168 595.5 392 75.0
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 3.0e-168 595.5 379 76.5
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 5.1e-168 594.7 346 82.7
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 6.7e-168 594.3 346 82.7
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 6.7e-168 594.3 327 86.9
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 1.5e-167 593.2 395 74.9
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.5e-167 593.2 346 82.1
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 2.5e-167 592.4 346 82.4
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 2.5e-167 592.4 350 81.7
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 3.3e-167 592.0 345 82.3
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 4.3e-167 591.7 355 80.6
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 5.7e-167 591.3 385 76.9
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 5.7e-167 591.3 350 81.1
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 7.4e-167 590.9 379 76.8
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 7.4e-167 590.9 348 80.7
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 1.3e-166 590.1 362 79.8
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 1.6e-166 589.7 361 79.5
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 2.2e-166 589.3 374 77.0
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 2.8e-166 589.0 385 75.1
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 8.2e-166 587.4 346 81.5
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 8.2e-166 587.4 389 74.6
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 1.1e-165 587.0 329 84.8
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 1.4e-165 586.6 397 72.5
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 1.8e-165 586.3 432 69.7
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 2.4e-165 585.9 350 80.0
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 3.1e-165 585.5 367 77.4
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 3.1e-165 585.5 351 80.1
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 4.1e-165 585.1 380 74.7
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 4.1e-165 585.1 424 71.0
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 5.3e-165 584.7 380 75.3
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 5.3e-165 584.7 376 75.3
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 9.0e-165 583.9 346 80.9
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 9.0e-165 583.9 401 72.3
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 1.5e-164 583.2 353 79.3
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 2.6e-164 582.4 377 75.1
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 2.6e-164 582.4 355 78.3
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 3.4e-164 582.0 342 81.0
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 7.7e-164 580.9 329 83.3
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 1.3e-163 580.1 370 76.8
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 1.7e-163 579.7 386 75.1
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 2.9e-163 578.9 383 73.9
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 8.5e-163 577.4 347 80.4
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 1.4e-162 576.6 351 79.8
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 1.9e-162 576.2 375 74.9
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 3.2e-162 575.5 383 74.4
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 5.5e-162 574.7 375 74.9
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 5.5e-162 574.7 353 77.9
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 1.0e-160 570.5 348 78.4
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 3.9e-160 568.5 384 73.7
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 3.3e-159 565.5 346 77.5
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 7.4e-159 564.3 347 77.5
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 8.2e-158 560.8 350 76.0
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 2.6e-148 529.3 323 79.3
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 3.5e-148 528.9 344 75.6
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 7.4e-143 511.1 334 71.9
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 4.1e-141 505.4 285 87.7
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 3.5e-140 502.3 329 70.8
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 5.9e-140 501.5 373 69.7
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 1.7e-139 500.0 360 66.4
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 2.2e-139 499.6 352 69.6
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 1.9e-138 496.5 349 71.9
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 1.0e-136 490.7 349 67.3
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 9.1e-133 477.6 378 66.1
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 4.5e-132 475.3 400 63.8
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 2.9e-123 446.0 332 62.7
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 3.3e-122 442.6 380 61.6
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 3.9e-115 419.1 387 56.1
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 8.9e-112 407.9 268 75.0
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 1.9e-109 400.2 243 80.7
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 2.4e-109 399.8 267 73.8
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 3.2e-109 399.4 331 56.8
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 3.9e-107 392.5 285 69.1
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 1.2e-103 380.9 327 58.4
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 4.7e-97 359.0 398 47.0
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 3.5e-68 263.1 287 44.9
SHI12244 Sapria himalayana HOM05D006202 ORTHO05D008227 2.8e-65 253.4 190 66.8
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 1.8e-64 250.8 183 68.3
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 1.2e-60 238.0 166 69.3
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 3.7e-49 199.9 174 60.3
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 5.3e-48 196.1 131 74.8
SHI34064 Sapria himalayana HOM05D006202 ORTHO05D367267 4.5e-15 86.7 59 76.3
A05p13580 Brassica napus HOM05D006202 ORTHO05D033532 8.5e-14 82.4 90 50.0
BraA05t20295Z Brassica rapa HOM05D006202 ORTHO05D033532 8.5e-14 82.4 90 50.0
TAR623G0116 Trochodendron aralioides HOM05D006202 ORTHO05D414173 3.7e-09 67.0 35 82.9


User provided reference genes

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