Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014981 Sechium edule HOM05D006639 ORTHO05D008339 4.7e-46 187.6 99 100.0
CsaV3_6G038390 Cucumis sativus L. HOM05D006639 ORTHO05D008339 1.4e-37 159.5 91 90.1
MELO3C014503.2 Cucumis melo HOM05D006639 ORTHO05D008339 5.2e-37 157.5 92 88.0
ClCG02G022260 Citrullus lanatus HOM05D006639 ORTHO05D008339 1.4e-34 149.4 96 83.3
Eucgr.J00499 Eucalyptus grandis HOM05D006639 ORTHO05D008339 2.0e-33 145.6 91 79.1
Haze_23370 Corylus avellana HOM05D006639 ORTHO05D008339 1.0e-32 143.3 88 79.5
Cfa010012 Carpinus fangiana HOM05D006639 ORTHO05D008339 1.7e-32 142.5 88 79.5
PGSC0003DMG400026357 Solanum tuberosum HOM05D006639 ORTHO05D008339 5.0e-32 141.0 91 78.0
Solyc11g068480.2 Solanum lycopersicum HOM05D006639 ORTHO05D008339 6.6e-32 140.6 91 78.0
Sopen11g027190 Solanum pennellii HOM05D006639 ORTHO05D008339 6.6e-32 140.6 91 78.0
BcaC02g10878 Brassica carinata HOM05D006639 ORTHO05D008339 1.1e-31 139.8 92 72.8
C04p24130 Brassica napus HOM05D006639 ORTHO05D008339 1.1e-31 139.8 92 72.8
BolC4t23910H Brassica oleracea HOM05D006639 ORTHO05D008339 1.1e-31 139.8 92 72.8
BraA07t29539Z Brassica rapa HOM05D006639 ORTHO05D008339 1.1e-31 139.8 92 72.8
Duzib168G1184 Durio zibethinus HOM05D006639 ORTHO05D008339 1.5e-31 139.4 92 75.0
PGR119G2179 Punica granatum HOM05D006639 ORTHO05D008339 1.9e-31 139.0 91 75.8
MBI17_g08336_MAGBIO Magnolia biondii HOM05D006639 ORTHO05D008339 2.5e-31 138.7 92 76.1
BcaB02g10091 Brassica carinata HOM05D006639 ORTHO05D008339 3.3e-31 138.3 92 71.7
A07p18230 Brassica napus HOM05D006639 ORTHO05D008339 3.3e-31 138.3 92 71.7
Ciclev10029525m.g Citrus clementina HOM05D006639 ORTHO05D008339 3.3e-31 138.3 91 75.8
Thecc.09G282700 Theobroma cacao HOM05D006639 ORTHO05D008339 5.6e-31 137.5 91 74.7
Manes.11G162100 Manihot esculenta HOM05D006639 ORTHO05D008339 7.3e-31 137.1 92 72.8
Ca_19409_v3 Cicer arietinum L. HOM05D006639 ORTHO05D008339 9.5e-31 136.7 91 75.8
RcHm_v2.0_Chr5g0044741 Rosa chinensis HOM05D006639 ORTHO05D008339 9.5e-31 136.7 91 76.9
Aa31LG5G8810 Aethionema arabicum HOM05D006639 ORTHO05D008339 1.6e-30 136.0 89 74.2
Gohir.A05G080500 Gossypium hirsutum HOM05D006639 ORTHO05D008339 2.1e-30 135.6 91 74.7
Gorai.009G085200 Gossypium raimondii HOM05D006639 ORTHO05D008339 2.1e-30 135.6 91 74.7
Aqoxy4G02766 Aquilegia oxysepala HOM05D006639 ORTHO05D008339 2.8e-30 135.2 95 71.6
CiPaw.14G099800 Carya illinoinensis HOM05D006639 ORTHO05D008339 2.8e-30 135.2 87 77.0
THA.LOC104826426 Tarenaya hassleriana HOM05D006639 ORTHO05D008339 2.8e-30 135.2 88 71.6
TPR.G17231 Trifolium pratense HOM05D006639 ORTHO05D008339 2.8e-30 135.2 91 74.7
arahy.Tifrunner.gnm1.ann1.I7PXCJ Arachis hypogaea HOM05D006639 ORTHO05D008339 3.6e-30 134.8 91 70.3
Medtr4g052950 Medicago truncatula HOM05D006639 ORTHO05D008339 3.6e-30 134.8 91 75.8
Psat7g187880 Pisum sativum HOM05D006639 ORTHO05D008339 3.6e-30 134.8 91 75.8
Potri.009G163500 Populus trichocarpa HOM05D006639 ORTHO05D008339 3.6e-30 134.8 88 78.4
CAN.G1524.3 Capsicum annuum HOM05D006639 ORTHO05D008339 4.7e-30 134.4 91 73.6
arahy.Tifrunner.gnm1.ann1.UG6V14 Arachis hypogaea HOM05D006639 ORTHO05D008339 6.1e-30 134.0 91 69.2
Gohir.D05G083500 Gossypium hirsutum HOM05D006639 ORTHO05D008339 6.1e-30 134.0 91 74.7
Nn6g34885 Nelumbo nucifera HOM05D006639 ORTHO05D008339 6.1e-30 134.0 92 71.7
Sp4g10260 Schrenkiella parvula HOM05D006639 ORTHO05D008339 8.0e-30 133.7 92 67.4
Thhalv10017865m.g Eutrema salsugineum HOM05D006639 ORTHO05D008339 1.0e-29 133.3 90 70.0
Nitab4.5_0000755g0110 Nicotiana tabacum HOM05D006639 ORTHO05D008339 1.0e-29 133.3 91 73.6
Nitab4.5_0010969g0010 Nicotiana tabacum HOM05D006639 ORTHO05D008339 1.0e-29 133.3 91 73.6
CSS0034800 Camellia sinensis var. sinensis HOM05D006639 ORTHO05D008339 1.4e-29 132.9 91 74.7
Glyma.11G183100 Glycine max HOM05D006639 ORTHO05D008339 1.4e-29 132.9 91 72.5
VMungo1127G0544 Vigna mungo HOM05D006639 ORTHO05D008339 1.4e-29 132.9 91 73.6
GSVIVG01036120001 Vitis vinifera HOM05D006639 ORTHO05D008339 1.4e-29 132.9 92 72.8
Atru.BG.107.p Acer truncatum HOM05D006639 ORTHO05D008339 1.8e-29 132.5 83 74.7
Sabra09G0127600 Salix brachista HOM05D006639 ORTHO05D008339 1.8e-29 132.5 89 75.3
TAR636G3315 Trochodendron aralioides HOM05D006639 ORTHO05D008339 1.8e-29 132.5 88 73.9
FvH4_3g24950 Fragaria vesca HOM05D006639 ORTHO05D008339 2.3e-29 132.1 91 73.6
Phvul.011G094600 Phaseolus vulgaris HOM05D006639 ORTHO05D008339 2.3e-29 132.1 91 73.6
Rhsim13G0112100 Rhododendron simsii HOM05D006639 ORTHO05D008339 2.3e-29 132.1 92 76.1
Carub.0004s0810 Capsella rubella HOM05D006639 ORTHO05D008339 4.0e-29 131.3 92 67.4
FAN21G1301 Fragaria x ananassa HOM05D006639 ORTHO05D008339 4.0e-29 131.3 91 73.6
HanXRQChr14g0438101 Helianthus annuus HOM05D006639 ORTHO05D008339 4.0e-29 131.3 89 77.5
Lalb_Chr19g0136451 Lupinus albus HOM05D006639 ORTHO05D008339 4.0e-29 131.3 92 70.7
CARHR120120 Cardamine hirsuta HOM05D006639 ORTHO05D008339 5.2e-29 131.0 92 66.3
Lj3g0014332 Lotus japonicus HOM05D006639 ORTHO05D008339 5.2e-29 131.0 91 69.2
BcaB01g03073 Brassica carinata HOM05D006639 ORTHO05D008339 6.8e-29 130.6 89 71.9
AL4G21460 Arabidopsis lyrata HOM05D006639 ORTHO05D008339 8.9e-29 130.2 92 66.3
AT2G27470 Arabidopsis thaliana HOM05D006639 ORTHO05D008339 8.9e-29 130.2 92 66.3
CDE08G1389 Ceratophyllum demersum HOM05D006639 ORTHO05D008339 1.2e-28 129.8 92 67.4
FAN25G3607 Fragaria x ananassa HOM05D006639 ORTHO05D008339 1.2e-28 129.8 91 72.5
Glyma.12G089400 Glycine max HOM05D006639 ORTHO05D008339 1.5e-28 129.4 91 71.4
FAN16G2085 Fragaria x ananassa HOM05D006639 ORTHO05D008339 2.6e-28 128.6 91 72.5
BolC3t15529H Brassica oleracea HOM05D006639 ORTHO05D008339 3.4e-28 128.3 92 67.4
CANSAT56G0593 Cannabis sativa HOM05D006639 ORTHO05D008339 5.7e-28 127.5 87 72.4
CANSAT56G1587 Cannabis sativa HOM05D006639 ORTHO05D008339 5.7e-28 127.5 87 72.4
Peaxi162Scf00040g00018 Petunia axillaris HOM05D006639 ORTHO05D008339 5.7e-28 127.5 93 71.0
Prupe.6G130500 Prunus persica HOM05D006639 ORTHO05D008339 5.7e-28 127.5 90 71.1
DCAR_006164 Daucus carota HOM05D006639 ORTHO05D008339 1.3e-27 126.3 90 72.2
Atru.chr3.3238 Acer truncatum HOM05D006639 ORTHO05D008339 1.7e-27 125.9 79 74.7
PSO339G4282 Papaver somniferum HOM05D006639 ORTHO05D008339 1.7e-27 125.9 92 69.6
TWI31G0153 Tripterygium wilfordii HOM05D006639 ORTHO05D008339 1.7e-27 125.9 90 72.2
MSTRG.18760 Avicennia marina HOM05D006639 ORTHO05D008339 2.2e-27 125.6 91 70.3
Cc01_g09080 Coffea canephora HOM05D006639 ORTHO05D008339 2.2e-27 125.6 92 67.4
Oeu022427.1 Olea europaea HOM05D006639 ORTHO05D008339 2.2e-27 125.6 91 69.2
BcaC01g04942 Brassica carinata HOM05D006639 ORTHO05D008339 2.9e-27 125.2 92 66.3
C03p31860 Brassica napus HOM05D006639 ORTHO05D008339 2.9e-27 125.2 91 67.0
vmacro03320 Vaccinium macrocarpon HOM05D006639 ORTHO05D008339 2.9e-27 125.2 99 70.7
SGA_v2.0_scaffold22G09859 Striga asiatica HOM05D006639 ORTHO05D008339 4.9e-27 124.4 91 69.2
Lj2A946T24 Lonicera japonica HOM05D006639 ORTHO05D008339 8.3e-27 123.6 93 69.9
Sc12g0004540 Simmondsia chinensis HOM05D006639 ORTHO05D008339 8.3e-27 123.6 91 67.0
HPP92_003216 Vanilla planifolia HOM05D006639 ORTHO05D008339 8.3e-27 123.6 104 59.6
Hund18759 Selenicereus undatus HOM05D006639 ORTHO05D008339 1.1e-26 123.2 92 69.6
Ah.15g095860 Amaranthus hybridus HOM05D006639 ORTHO05D008339 1.4e-26 122.9 92 69.6
Migut.D02442 Erythranthe guttata HOM05D006639 ORTHO05D008339 1.8e-26 122.5 91 68.1
unitig_37.g12892 Utricularia gibba HOM05D006639 ORTHO05D008339 1.8e-26 122.5 91 64.8
Lsat_1_v5_gn_2_59441 Lactuca sativa HOM05D006639 ORTHO05D008339 2.4e-26 122.1 89 70.8
Lj2A964T5 Lonicera japonica HOM05D006639 ORTHO05D008339 2.4e-26 122.1 93 68.8
PSO384G2857 Papaver somniferum HOM05D006639 ORTHO05D008339 2.4e-26 122.1 92 67.4
QL01p012190 Quercus lobata HOM05D006639 ORTHO05D008339 2.4e-26 122.1 91 71.4
FAN11G3713 Fragaria x ananassa HOM05D006639 ORTHO05D008339 3.2e-26 121.7 87 71.3
Oeu031474.1 Olea europaea HOM05D006639 ORTHO05D008339 4.1e-26 121.3 91 67.0
Os09g0568200 Oryza sativa ssp. japonica HOM05D006639 ORTHO05D008339 7.0e-26 120.6 93 66.7
ECA238G3612 Erigeron canadensis HOM05D006639 ORTHO05D008339 1.6e-25 119.4 88 71.6
ATR0776G083 Amborella trichopoda HOM05D006639 ORTHO05D008339 4.6e-25 117.9 97 59.8
DCAR_010346 Daucus carota HOM05D006639 ORTHO05D008339 5.9e-25 117.5 92 67.4
MD11G1164600 Malus domestica HOM05D006639 ORTHO05D008339 7.8e-25 117.1 85 67.1
EL10Ac7g15828 Beta vulgaris HOM05D006639 ORTHO05D008339 1.3e-24 116.3 92 66.3
Zm00001eb308280 Zea mays HOM05D006639 ORTHO05D008339 2.3e-24 115.5 94 62.8
SEGI_32267 Sequoiadendron giganteum HOM05D006639 ORTHO05D008339 6.6e-24 114.0 96 58.3
SMO340G0007 Selaginella moellendorffii HOM05D006639 ORTHO05D008339 3.3e-23 111.7 96 57.3
Pp3c26_8280 Physcomitrium patens HOM05D006639 ORTHO05D008339 4.3e-23 111.3 96 58.3
Mapoly0105s0006 Marchantia polymorpha HOM05D006639 ORTHO05D008339 2.8e-22 108.6 99 55.6
AagrBONN_evm.TU.Sc2ySwM_362.1778 Anthoceros agrestis HOM05D006639 ORTHO05D008339 6.8e-21 104.0 99 53.5
PRCOL_00006285 Prasinoderma coloniale HOM05D006639 ORTHO05D008339 1.1e-18 96.7 93 49.5
Cre07.g341800 Chlamydomonas reinhardtii HOM05D006639 ORTHO05D008339 1.2e-17 93.2 92 46.7
MCO15G204 Micromonas commoda HOM05D006639 ORTHO05D008339 1.6e-14 82.8 97 45.4
ECA238G0189 Erigeron canadensis HOM05D006639 ORTHO05D008339 8.1e-14 80.5 55 70.9
Nn1g05220 Nelumbo nucifera HOM05D006639 ORTHO05D008339 9.2e-10 67.0 51 66.7
Nn1g05039 Nelumbo nucifera HOM05D006639 ORTHO05D008339 7.8e-09 63.9 49 65.3
Nn053s41924 Nelumbo nucifera HOM05D006639 ORTHO05D008339 3.9e-08 61.6 51 60.8
Nn1g05216 Nelumbo nucifera HOM05D006639 ORTHO05D008339 3.9e-08 61.6 51 60.8
Nn1g05215 Nelumbo nucifera HOM05D006639 ORTHO05D008339 5.1e-08 61.2 49 63.3


User provided reference genes

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