Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014973 Sechium edule HOM05D003969 ORTHO05D003125 9.2e-71 270.0 127 100.0
ClCG08G013530 Citrullus lanatus HOM05D008824 ORTHO05D003125 1.8e-29 132.9 143 57.3
MELO3C030306.2 Cucumis melo HOM05D008824 ORTHO05D003125 8.7e-21 104.0 118 55.1
CsaV3_2G032290 Cucumis sativus L. HOM05D008824 ORTHO05D003125 1.4e-13 80.1 85 54.1
ClCG05G016610 Citrullus lanatus HOM05D003969 ORTHO05D003125 1.8e-13 79.7 108 50.9
CsaV3_4G036890 Cucumis sativus L. HOM05D003969 ORTHO05D003125 9.7e-12 73.9 113 46.9
Sed0009487 Sechium edule HOM05D003969 ORTHO05D003125 1.3e-11 73.6 106 47.2
MELO3C016989.2 Cucumis melo HOM05D003969 ORTHO05D003125 2.2e-11 72.8 111 47.7
VMungo0647G1373 Vigna mungo HOM05D013068 ORTHO05D003125 4.1e-10 68.6 129 38.0
Nn2g12243 Nelumbo nucifera HOM05D003969 ORTHO05D003125 2.0e-09 66.2 140 34.3
Sc23g0006560 Simmondsia chinensis HOM05D003969 ORTHO05D003125 2.0e-09 66.2 112 42.0
CiPaw.07G226900 Carya illinoinensis HOM05D003969 ORTHO05D003125 7.7e-09 64.3 105 43.8
Glyma.14G112500 Glycine max HOM05D003969 ORTHO05D003125 7.7e-09 64.3 63 55.6
Sc23g0006570 Simmondsia chinensis HOM05D003969 ORTHO05D003125 1.0e-08 63.9 104 44.2
TAR383G0074 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.0e-08 63.9 126 37.3
Migut.A00008 Erythranthe guttata HOM05D003969 ORTHO05D003125 1.3e-08 63.5 80 47.5
TAR626G0029 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.3e-08 63.5 113 38.9
Glyma.17G215400 Glycine max HOM05D013068 ORTHO05D003125 1.7e-08 63.2 64 54.7
Phvul.001G047400 Phaseolus vulgaris HOM05D013068 ORTHO05D003125 1.7e-08 63.2 65 52.3
QL02p020337 Quercus lobata HOM05D008824 ORTHO05D003125 2.2e-08 62.8 121 39.7
Ah.16g104800 Amaranthus hybridus HOM05D003969 ORTHO05D003125 3.8e-08 62.0 88 40.9
Ah.10g035700 Amaranthus hybridus HOM05D003969 ORTHO05D003125 5.0e-08 61.6 89 41.6
TAR636G2249 Trochodendron aralioides HOM05D003969 ORTHO05D003125 5.0e-08 61.6 122 36.9
AUR62031569 Chenopodium quinoa HOM05D003969 ORTHO05D003125 1.4e-07 60.1 75 45.3
Nn8g39714 Nelumbo nucifera HOM05D003969 ORTHO05D003125 1.9e-07 59.7 124 33.9
ECA236G4020 Erigeron canadensis HOM05D003969 ORTHO05D003125 2.5e-07 59.3 81 42.0
Eucgr.C01701 Eucalyptus grandis HOM05D003969 ORTHO05D003125 2.5e-07 59.3 71 53.5
Prupe.7G255000 Prunus persica HOM05D003969 ORTHO05D003125 2.5e-07 59.3 58 48.3
SalBow1G8303 Salvia bowleyana HOM05D003969 ORTHO05D003125 2.5e-07 59.3 118 37.3
TAR625G0404 Trochodendron aralioides HOM05D003969 ORTHO05D003125 2.5e-07 59.3 113 36.3
CiPaw.15G182600 Carya illinoinensis HOM05D003969 ORTHO05D003125 3.2e-07 58.9 61 49.2
Atru.chr7.2498 Acer truncatum HOM05D003969 ORTHO05D003125 4.2e-07 58.5 129 36.4
Eucgr.C01632 Eucalyptus grandis HOM05D003969 ORTHO05D003125 4.2e-07 58.5 119 38.7
Eucgr.C01699 Eucalyptus grandis HOM05D003969 ORTHO05D003125 4.2e-07 58.5 119 38.7
AUR62012444 Chenopodium quinoa HOM05D003969 ORTHO05D003125 5.5e-07 58.2 74 45.9
Hma1.2p1_0228F.1_g096590 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 5.5e-07 58.2 71 47.9
Eucgr.C01639 Eucalyptus grandis HOM05D003969 ORTHO05D003125 7.2e-07 57.8 121 38.0
Gohir.A13G203200 Gossypium hirsutum HOM05D003969 ORTHO05D003125 7.2e-07 57.8 85 43.5
Gorai.013G237600 Gossypium raimondii HOM05D003969 ORTHO05D003125 7.2e-07 57.8 85 43.5
Dinv15887 Davidia involucrata HOM05D003969 ORTHO05D003125 9.4e-07 57.4 97 40.2
Duzib150G0809 Durio zibethinus HOM05D003969 ORTHO05D003125 9.4e-07 57.4 97 38.1
PGSC0003DMG400029901 Solanum tuberosum HOM05D003969 ORTHO05D003125 9.4e-07 57.4 71 43.7
Thecc.09G019700 Theobroma cacao HOM05D003969 ORTHO05D003125 9.4e-07 57.4 94 37.2
CiPaw.15G182500 Carya illinoinensis HOM05D003969 ORTHO05D003125 1.2e-06 57.0 61 47.5
Peaxi162Scf00116g00085 Petunia axillaris HOM05D003969 ORTHO05D003125 1.2e-06 57.0 100 42.0
EL10Ac2g04157 Beta vulgaris HOM05D003969 ORTHO05D003125 1.6e-06 56.6 120 35.0
CSS0007982 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 1.6e-06 56.6 100 41.0
Eucgr.C01687 Eucalyptus grandis HOM05D003969 ORTHO05D003125 1.6e-06 56.6 119 37.8
Eucgr.C01690 Eucalyptus grandis HOM05D003969 ORTHO05D003125 1.6e-06 56.6 69 50.7
Manes.03G012100 Manihot esculenta HOM05D003969 ORTHO05D003125 1.6e-06 56.6 120 36.7
Medtr4g116500 Medicago truncatula HOM05D003969 ORTHO05D003125 1.6e-06 56.6 104 39.4
Eucgr.C01640 Eucalyptus grandis HOM05D003969 ORTHO05D003125 2.1e-06 56.2 71 50.7
Gohir.D13G208500 Gossypium hirsutum HOM05D003969 ORTHO05D003125 2.1e-06 56.2 85 42.4
Nitab4.5_0002992g0060 Nicotiana tabacum HOM05D003969 ORTHO05D003125 2.7e-06 55.8 99 41.4
PGSC0003DMG400005307 Solanum tuberosum HOM05D003969 ORTHO05D003125 3.6e-06 55.5 108 38.0
Solyc08g041810.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 4.7e-06 55.1 74 41.9
Cfa013102 Carpinus fangiana HOM05D003969 ORTHO05D003125 6.1e-06 54.7 110 40.9
Haze_21463 Corylus avellana HOM05D008824 ORTHO05D003125 6.1e-06 54.7 82 46.3
Eucgr.C01695 Eucalyptus grandis HOM05D003969 ORTHO05D003125 6.1e-06 54.7 71 50.7
Eucgr.L03259 Eucalyptus grandis HOM05D003969 ORTHO05D003125 6.1e-06 54.7 61 54.1
Actinidia21911 Actinidia chinensis HOM05D003969 ORTHO05D003125 7.9e-06 54.3 119 31.9
CANSAT01G2013 Cannabis sativa HOM05D008824 ORTHO05D003125 7.9e-06 54.3 93 36.6
Eucgr.C01694 Eucalyptus grandis HOM05D003969 ORTHO05D003125 7.9e-06 54.3 118 39.8
Eucgr.C01698 Eucalyptus grandis HOM05D003969 ORTHO05D003125 7.9e-06 54.3 98 43.9
Lalb_Chr22g0361461 Lupinus albus HOM05D013068 ORTHO05D003125 7.9e-06 54.3 145 35.9
Solyc01g011390.2 Solanum lycopersicum HOM05D003969 ORTHO05D003125 7.9e-06 54.3 108 36.1


User provided reference genes

Program Settings