Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 1.7e-115 419.5 224 100.0
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 6.5e-96 354.4 228 85.1
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 3.8e-88 328.6 222 82.4
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 6.1e-86 321.2 250 75.2
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 1.0e-72 277.3 225 70.2
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 2.5e-71 272.7 223 69.5
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 2.1e-70 269.6 225 68.4
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 6.2e-70 268.1 224 69.2
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 2.3e-69 266.2 227 67.0
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 5.2e-69 265.0 225 68.4
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 6.8e-69 264.6 225 69.3
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 8.9e-69 264.2 225 68.9
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 8.9e-69 264.2 225 68.9
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 1.2e-68 263.8 225 68.9
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 1.5e-68 263.5 216 68.5
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 2.0e-68 263.1 226 67.7
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 7.5e-68 261.2 225 67.6
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 7.5e-68 261.2 224 67.4
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 9.8e-68 260.8 233 66.5
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 1.3e-67 260.4 225 67.6
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 1.3e-67 260.4 226 68.6
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 3.7e-67 258.8 222 68.0
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 1.1e-66 257.3 226 65.9
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 1.4e-66 256.9 233 64.8
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 1.4e-66 256.9 226 66.4
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 9.2e-66 254.2 234 65.4
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 2.7e-65 252.7 187 72.2
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 1.3e-64 250.4 228 65.8
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 9.5e-63 244.2 233 63.1
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 9.5e-63 244.2 167 79.6
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 2.1e-62 243.0 181 73.5
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 2.8e-62 242.7 172 78.5
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 2.8e-62 242.7 181 73.5
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 2.8e-62 242.7 228 64.5
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 3.6e-62 242.3 225 64.9
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 3.6e-62 242.3 215 66.5
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 4.7e-62 241.9 180 72.8
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 6.2e-62 241.5 176 74.4
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 6.2e-62 241.5 215 66.5
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 6.2e-62 241.5 222 63.1
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 8.1e-62 241.1 226 63.7
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 8.1e-62 241.1 175 75.4
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 1.1e-61 240.7 232 62.9
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 1.1e-61 240.7 179 76.0
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 1.4e-61 240.4 223 64.6
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 1.8e-61 240.0 170 78.8
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 1.8e-61 240.0 218 64.2
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 2.3e-61 239.6 226 64.2
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 2.3e-61 239.6 232 62.9
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 3.1e-61 239.2 213 64.3
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 3.1e-61 239.2 222 64.9
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 3.1e-61 239.2 188 71.8
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 4.0e-61 238.8 226 64.2
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 5.2e-61 238.4 219 67.1
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 8.9e-61 237.7 225 64.0
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 2.0e-60 236.5 211 68.2
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 3.4e-60 235.7 174 74.1
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 3.4e-60 235.7 182 72.0
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 3.4e-60 235.7 176 72.7
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 9.9e-60 234.2 172 72.7
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 2.9e-59 232.6 172 74.4
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 6.4e-59 231.5 171 75.4
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 1.1e-58 230.7 173 74.0
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 1.6e-57 226.9 170 73.5
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 1.6e-57 226.9 170 73.5
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 1.6e-57 226.9 182 69.8
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 2.1e-57 226.5 226 64.2
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 2.7e-57 226.1 184 70.7
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 3.5e-57 225.7 175 72.0
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 6.0e-57 224.9 219 60.3
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 1.0e-56 224.2 225 60.4
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 1.0e-56 224.2 191 68.1
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 3.0e-56 222.6 159 76.7
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 3.9e-56 222.2 176 68.8
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 5.1e-56 221.9 175 72.6
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 8.6e-56 221.1 176 68.8
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 1.5e-55 220.3 190 68.4
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 5.6e-55 218.4 190 67.4
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 1.2e-54 217.2 179 68.7
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 1.6e-54 216.9 169 73.4
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 1.6e-54 216.9 126 89.7
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 1.6e-54 216.9 199 63.3
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 1.6e-54 216.9 173 68.8
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 2.8e-54 216.1 204 64.7
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 8.1e-54 214.5 184 67.4
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 1.1e-53 214.2 206 60.2
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 1.8e-53 213.4 224 59.8
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 1.8e-53 213.4 224 59.8
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 3.1e-53 212.6 247 55.9
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 8.9e-53 211.1 201 62.7
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 1.5e-52 210.3 231 59.3
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 1.7e-51 206.8 149 77.9
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 1.9e-50 203.4 164 72.6
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 2.4e-50 203.0 189 63.0
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 3.2e-50 202.6 127 83.5
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 4.2e-50 202.2 198 60.6
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 3.5e-49 199.1 190 62.6
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 3.9e-48 195.7 122 83.6
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 3.9e-48 195.7 122 83.6
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 1.1e-47 194.1 149 71.8
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 1.9e-47 193.4 166 63.3
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 1.1e-45 187.6 167 69.5
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 2.4e-45 186.4 161 69.6
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 5.3e-45 185.3 122 78.7
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 1.9e-42 176.8 137 64.2
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 2.4e-42 176.4 150 65.3
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 7.1e-42 174.9 260 45.8
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 1.0e-40 171.0 159 56.6
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 8.7e-40 167.9 163 56.4
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 5.8e-36 155.2 243 42.0
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 1.9e-31 140.2 108 71.3
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 9.6e-31 137.9 168 47.6
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 3.8e-27 125.9 98 69.4
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 8.4e-27 124.8 120 60.8
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 3.9e-24 115.9 183 42.6
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 3.9e-24 115.9 98 59.2
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 6.7e-24 115.2 151 42.4
VMungo0720G0167 Vigna mungo HOM05D000028 ORTHO05D001812 1.4e-21 107.5 90 67.8
Nn017s41473 Nelumbo nucifera HOM05D000586 ORTHO05D008681 3.1e-21 106.3 81 70.4
MD10G1061600 Malus domestica HOM05D000586 ORTHO05D008681 7.2e-18 95.1 147 42.9
BcaB07g33434 Brassica carinata HOM05D000586 ORTHO05D008681 1.6e-17 94.0 71 73.2


User provided reference genes

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