Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014968 Sechium edule HOM05D004238 ORTHO05D004934 1.6e-157 559.3 274 100.0
CsaV3_2G033830 Cucumis sativus L. HOM05D004238 ORTHO05D004934 4.6e-67 258.8 373 45.8
ClCG11G007750 Citrullus lanatus HOM05D004238 ORTHO05D004934 6.6e-66 255.0 384 44.5
Dinv12220 Davidia involucrata HOM05D004238 ORTHO05D004934 2.8e-48 196.4 330 38.5
Manes.01G014900 Manihot esculenta HOM05D004238 ORTHO05D004934 2.6e-46 189.9 363 36.9
Nitab4.5_0001986g0030 Nicotiana tabacum HOM05D004238 ORTHO05D004934 1.2e-43 181.0 370 34.9
Aqoxy3G00204 Aquilegia oxysepala HOM05D004238 ORTHO05D004934 3.5e-43 179.5 119 73.9
Cpa.g.sc170.33 Carica papaya HOM05D004238 ORTHO05D004934 4.6e-43 179.1 118 72.9
Atru.chr1.1618 Acer truncatum HOM05D004238 ORTHO05D004934 7.9e-43 178.3 116 73.3
Dinv34796 Davidia involucrata HOM05D004238 ORTHO05D004934 1.0e-42 177.9 118 72.9
Duzib138G0550 Durio zibethinus HOM05D004238 ORTHO05D004934 1.3e-42 177.6 118 71.2
Manes.02G071200 Manihot esculenta HOM05D004238 ORTHO05D004934 1.8e-42 177.2 365 36.2
Peaxi162Scf00683g00158 Petunia axillaris HOM05D004238 ORTHO05D004934 1.8e-42 177.2 369 34.1
MBI09_g25158_MAGBIO Magnolia biondii HOM05D004238 ORTHO05D004934 2.3e-42 176.8 117 73.5
ATR0807G117 Amborella trichopoda HOM05D004238 ORTHO05D004934 3.0e-42 176.4 117 74.4
Gohir.D11G171700 Gossypium hirsutum HOM05D004238 ORTHO05D004934 3.9e-42 176.0 118 67.8
TAR535G0010 Trochodendron aralioides HOM05D004238 ORTHO05D004934 3.9e-42 176.0 381 34.6
TAR371G0763 Trochodendron aralioides HOM05D004238 ORTHO05D004934 5.1e-42 175.6 117 75.2
COL.COLO4_09370 Corchorus olitorius HOM05D004238 ORTHO05D004934 8.7e-42 174.9 123 68.3
Nitab4.5_0004028g0040 Nicotiana tabacum HOM05D004238 ORTHO05D004934 1.1e-41 174.5 117 73.5
Nn4g23948 Nelumbo nucifera HOM05D004238 ORTHO05D004934 1.5e-41 174.1 119 69.7
Haze_18725 Corylus avellana HOM05D004238 ORTHO05D004934 3.3e-41 172.9 117 71.8
PSO017G2643 Papaver somniferum HOM05D004238 ORTHO05D004934 3.3e-41 172.9 117 73.5
Solyc03g119200.4 Solanum lycopersicum HOM05D004238 ORTHO05D004934 4.3e-41 172.6 117 72.6
CAN.G1129.11 Capsicum annuum HOM05D004238 ORTHO05D004934 5.6e-41 172.2 117 72.6
Migut.I00409 Erythranthe guttata HOM05D004238 ORTHO05D004934 7.4e-41 171.8 117 72.6
Gohir.A11G165600 Gossypium hirsutum HOM05D004238 ORTHO05D004934 7.4e-41 171.8 118 66.1
Oeu000985.1 Olea europaea HOM05D004238 ORTHO05D004934 7.4e-41 171.8 117 71.8
RcHm_v2.0_Chr7g0179451 Rosa chinensis HOM05D004238 ORTHO05D004934 7.4e-41 171.8 119 70.6
PGSC0003DMG400005732 Solanum tuberosum HOM05D004238 ORTHO05D004934 9.6e-41 171.4 117 72.6
Atru.chr9.900 Acer truncatum HOM05D004238 ORTHO05D004934 1.6e-40 170.6 117 72.6
CiPaw.16G088800 Carya illinoinensis HOM05D004238 ORTHO05D004934 1.6e-40 170.6 117 70.9
Sed0011571 Sechium edule HOM05D004238 ORTHO05D004934 2.8e-40 169.9 119 68.1
Dinv28139 Davidia involucrata HOM05D004238 ORTHO05D004934 3.7e-40 169.5 117 69.2
FAN08G0774 Fragaria x ananassa HOM05D004238 ORTHO05D004934 3.7e-40 169.5 119 68.9
FAN13G1096 Fragaria x ananassa HOM05D004238 ORTHO05D004934 3.7e-40 169.5 119 68.9
FAN18G3483 Fragaria x ananassa HOM05D004238 ORTHO05D004934 3.7e-40 169.5 119 68.9
MD14G1229600 Malus domestica HOM05D004238 ORTHO05D004934 3.7e-40 169.5 117 70.1
CSS0018341 Camellia sinensis var. sinensis HOM05D004238 ORTHO05D004934 4.8e-40 169.1 365 33.4
CSS0035838 Camellia sinensis var. sinensis HOM05D004238 ORTHO05D004934 4.8e-40 169.1 365 33.4
DCAR_015154 Daucus carota HOM05D004238 ORTHO05D004934 4.8e-40 169.1 117 71.8
Lsat_1_v5_gn_8_143241 Lactuca sativa HOM05D004238 ORTHO05D004934 4.8e-40 169.1 128 66.4
GSVIVG01008335001 Vitis vinifera HOM05D004238 ORTHO05D004934 4.8e-40 169.1 117 71.8
CiPaw.15G135000 Carya illinoinensis HOM05D004238 ORTHO05D004934 6.2e-40 168.7 117 70.1
ClCG06G014610 Citrullus lanatus HOM05D004238 ORTHO05D004934 6.2e-40 168.7 117 70.1
MELO3C017324.2 Cucumis melo HOM05D004238 ORTHO05D004934 6.2e-40 168.7 117 68.4
CANSAT78G0772 Cannabis sativa HOM05D004238 ORTHO05D004934 8.1e-40 168.3 113 70.8
Thecc.04G129000 Theobroma cacao HOM05D004238 ORTHO05D004934 8.1e-40 168.3 118 66.9
MSTRG.11313 Avicennia marina HOM05D004238 ORTHO05D004934 1.1e-39 167.9 117 70.1
CsaV3_1G004010 Cucumis sativus L. HOM05D004238 ORTHO05D004934 1.1e-39 167.9 117 68.4
Eucgr.B00825 Eucalyptus grandis HOM05D004238 ORTHO05D004934 1.8e-39 167.2 117 69.2
Lj9C425T3 Lonicera japonica HOM05D004238 ORTHO05D004934 2.4e-39 166.8 117 70.1
Prupe.5G224400 Prunus persica HOM05D004238 ORTHO05D004934 2.4e-39 166.8 116 69.0
TPR.G5108 Trifolium pratense HOM05D004238 ORTHO05D004934 3.1e-39 166.4 119 68.1
Ca_11587_v3 Cicer arietinum L. HOM05D004238 ORTHO05D004934 4.0e-39 166.0 119 68.1
Hma1.2p1_1283F.1_g272760 Hydrangea macrophylla HOM05D004238 ORTHO05D004934 4.0e-39 166.0 117 70.1
Thecc.03G040700 Theobroma cacao HOM05D004238 ORTHO05D004934 4.0e-39 166.0 117 68.4
Lj4g0001453 Lotus japonicus HOM05D004238 ORTHO05D004934 5.3e-39 165.6 117 70.1
Cpa.g.sc3.467 Carica papaya HOM05D004238 ORTHO05D004934 6.9e-39 165.2 117 69.2
Psat7g083560 Pisum sativum HOM05D004238 ORTHO05D004934 9.0e-39 164.9 119 67.2
Hund02354 Selenicereus undatus HOM05D004238 ORTHO05D004934 1.2e-38 164.5 117 66.7
HanXRQChr17g0559411 Helianthus annuus HOM05D004238 ORTHO05D004934 1.5e-38 164.1 117 70.9
Sc04g0003400 Simmondsia chinensis HOM05D004238 ORTHO05D004934 1.5e-38 164.1 116 68.1
Ciclev10011789m.g Citrus clementina HOM05D004238 ORTHO05D004934 4.5e-38 162.5 118 66.1
COL.COLO4_20838 Corchorus olitorius HOM05D004238 ORTHO05D004934 5.8e-38 162.2 128 64.8
Eucgr.B00826 Eucalyptus grandis HOM05D004238 ORTHO05D004934 5.8e-38 162.2 297 35.7
CANSAT80G2380 Cannabis sativa HOM05D004238 ORTHO05D004934 7.6e-38 161.8 117 66.7
Glyma.08G094600 Glycine max HOM05D004238 ORTHO05D004934 9.9e-38 161.4 119 66.4
Sabra12G0038000 Salix brachista HOM05D004238 ORTHO05D004934 9.9e-38 161.4 117 67.5
Glyma.05G139300 Glycine max HOM05D004238 ORTHO05D004934 1.3e-37 161.0 119 66.4
Cc04_g06880 Coffea canephora HOM05D004238 ORTHO05D004934 1.7e-37 160.6 116 68.1
Duzib084G0471 Durio zibethinus HOM05D004238 ORTHO05D004934 1.7e-37 160.6 117 65.0
VMungo0251G1679 Vigna mungo HOM05D004238 ORTHO05D004934 1.7e-37 160.6 117 65.8
Phvul.002G182700 Phaseolus vulgaris HOM05D004238 ORTHO05D004934 2.2e-37 160.2 117 65.8
HPP92_008849 Vanilla planifolia HOM05D004238 ORTHO05D004934 2.2e-37 160.2 117 65.0
Zm00001eb124820 Zea mays HOM05D004238 ORTHO05D004934 2.2e-37 160.2 117 68.4
Potri.012G054200 Populus trichocarpa HOM05D004238 ORTHO05D004934 2.9e-37 159.8 117 68.4
arahy.Tifrunner.gnm1.ann1.KCMD1F Arachis hypogaea HOM05D004238 ORTHO05D004934 3.8e-37 159.5 119 65.5
Os01g0138900 Oryza sativa ssp. japonica HOM05D004238 ORTHO05D004934 4.9e-37 159.1 117 65.8
Lalb_Chr13g0293671 Lupinus albus HOM05D004238 ORTHO05D004934 1.1e-36 157.9 116 66.4
TWI15G0256 Tripterygium wilfordii HOM05D004238 ORTHO05D004934 1.9e-36 157.1 115 67.8
CDE08G0051 Ceratophyllum demersum HOM05D004238 ORTHO05D004934 2.4e-36 156.8 117 64.1
Aa31LG8G5120 Aethionema arabicum HOM05D004238 ORTHO05D004934 3.2e-36 156.4 117 62.4
DCAR_011373 Daucus carota HOM05D004238 ORTHO05D004934 4.2e-36 156.0 117 67.5
PGR083G1292 Punica granatum HOM05D004238 ORTHO05D004934 4.2e-36 156.0 130 60.8
AT3G18270 Arabidopsis thaliana HOM05D004238 ORTHO05D004934 5.5e-36 155.6 117 62.4
CARHR093620 Cardamine hirsuta HOM05D004238 ORTHO05D004934 5.5e-36 155.6 117 62.4
Thhalv10020846m.g Eutrema salsugineum HOM05D004238 ORTHO05D004934 1.2e-35 154.5 117 63.2
DCAR_000177 Daucus carota HOM05D004238 ORTHO05D004934 2.1e-35 153.7 117 63.2
DCAR_011370 Daucus carota HOM05D004238 ORTHO05D004934 2.1e-35 153.7 117 63.2
Zm00001eb335570 Zea mays HOM05D004238 ORTHO05D004934 2.1e-35 153.7 117 65.0
AL3G31500 Arabidopsis lyrata HOM05D004238 ORTHO05D004934 3.5e-35 152.9 117 60.7
arahy.Tifrunner.gnm1.ann1.NC6GJT Arachis hypogaea HOM05D004238 ORTHO05D004934 3.5e-35 152.9 116 64.7
C05p47680 Brassica napus HOM05D004238 ORTHO05D004934 4.6e-35 152.5 114 64.0
BolC5t33477H Brassica oleracea HOM05D004238 ORTHO05D004934 4.6e-35 152.5 114 64.9
Carub.0003s1804 Capsella rubella HOM05D004238 ORTHO05D004934 4.6e-35 152.5 117 61.5
THA.LOC104820382 Tarenaya hassleriana HOM05D004238 ORTHO05D004934 4.6e-35 152.5 116 65.5
A05p31380 Brassica napus HOM05D004238 ORTHO05D004934 1.8e-34 150.6 115 63.5
BraA05t21977Z Brassica rapa HOM05D004238 ORTHO05D004934 1.1e-33 147.9 115 62.6
FAN04G1535 Fragaria x ananassa HOM05D004238 ORTHO05D004934 3.3e-33 146.4 119 63.0
DCAR_011366 Daucus carota HOM05D004238 ORTHO05D004934 8.2e-32 141.7 106 65.1
TPR.G26740 Trifolium pratense HOM05D004238 ORTHO05D004934 6.9e-31 138.7 105 63.8
SMO146G0146 Selaginella moellendorffii HOM05D004238 ORTHO05D004934 3.4e-30 136.3 117 59.0
Gohir.D07G071400 Gossypium hirsutum HOM05D004238 ORTHO05D004934 5.8e-30 135.6 96 70.8
TAR426G0005 Trochodendron aralioides HOM05D004238 ORTHO05D004934 7.6e-30 135.2 96 72.9
Rhsim08G0130500 Rhododendron simsii HOM05D004238 ORTHO05D004934 1.0e-29 134.8 96 70.8
Rhsim08G0130600 Rhododendron simsii HOM05D004238 ORTHO05D004934 1.0e-29 134.8 96 70.8
PSO478G0260 Papaver somniferum HOM05D004238 ORTHO05D004934 1.7e-29 134.0 96 70.8
Pp3c2_34370 Physcomitrium patens HOM05D004238 ORTHO05D004934 2.2e-29 133.7 116 55.2
Mapoly0058s0107 Marchantia polymorpha HOM05D004238 ORTHO05D004934 4.9e-29 132.5 114 59.6
ECA233G1745 Erigeron canadensis HOM05D004238 ORTHO05D004934 2.5e-28 130.2 296 33.4
Thhalv10022164m.g Eutrema salsugineum HOM05D004238 ORTHO05D004934 2.5e-28 130.2 96 66.7
FvH4_5g16670 Fragaria vesca HOM05D004238 ORTHO05D004934 4.2e-28 129.4 96 66.7
HPP92_008863 Vanilla planifolia HOM05D004238 ORTHO05D004934 7.1e-28 128.6 96 64.6
DCAR_011371 Daucus carota HOM05D004238 ORTHO05D004934 4.6e-27 125.9 99 64.6
SMO146G0383 Selaginella moellendorffii HOM05D004238 ORTHO05D004934 4.6e-27 125.9 102 61.8
Sabra15G0040700 Salix brachista HOM05D004238 ORTHO05D004934 1.9e-25 120.6 117 54.7
DCAR_011367 Daucus carota HOM05D004238 ORTHO05D004934 2.5e-25 120.2 96 61.5
MD06G1220000 Malus domestica HOM05D004238 ORTHO05D004934 1.3e-24 117.9 117 54.7
Sp3g16390 Schrenkiella parvula HOM05D004238 ORTHO05D004934 6.9e-23 112.1 89 61.8
DCAR_024088 Daucus carota HOM05D004238 ORTHO05D004934 3.8e-21 106.3 76 69.7
Gorai.001G075300 Gossypium raimondii HOM05D004238 ORTHO05D004934 3.8e-21 106.3 77 70.1
Atru.chr12.656 Acer truncatum HOM05D004238 ORTHO05D004934 5.0e-21 105.9 80 70.0
Atru.chr12.683 Acer truncatum HOM05D004238 ORTHO05D004934 8.5e-21 105.1 76 71.1
Potri.015G044400 Populus trichocarpa HOM05D004238 ORTHO05D004934 3.0e-18 96.7 233 33.0
DCAR_000092 Daucus carota HOM05D004238 ORTHO05D004934 1.3e-16 91.3 76 60.5
PRCOL_00000826 Prasinoderma coloniale HOM05D004238 ORTHO05D004934 5.3e-15 85.9 113 42.5
MELO3C008155.2 Cucumis melo HOM05D004238 ORTHO05D004934 1.4e-12 77.8 77 55.8
TAR374G1013 Trochodendron aralioides HOM05D001418 ORTHO05D002038 5.5e-12 75.9 74 56.8
Nn4g22335 Nelumbo nucifera HOM05D004238 ORTHO05D004934 7.2e-12 75.5 65 60.0
Solyc08g045760.1 Solanum lycopersicum HOM05D004238 ORTHO05D004934 9.7e-09 65.1 66 51.5
Nn2g15201 Nelumbo nucifera HOM05D004238 ORTHO05D004934 3.7e-08 63.2 56 60.7
Lalb_Chr00c06g0404671 Lupinus albus HOM05D004238 ORTHO05D004934 7.7e-06 55.5 77 40.3


User provided reference genes

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