Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014881 Sechium edule HOM05D008619 ORTHO05D010307 2.2e-77 293.5 359 100.0
ClCG09G008350 Citrullus lanatus HOM05D016535 ORTHO05D018164 1.8e-15 87.8 125 44.0
Sed0020881 Sechium edule HOM05D008619 ORTHO05D000090 7.7e-14 82.4 177 78.5
Sed0000918 Sechium edule HOM05D008619 ORTHO05D010307 6.5e-13 79.3 75 58.7
Sed0014539 Sechium edule HOM05D008619 ORTHO05D000090 2.3e-10 70.9 74 75.7
vmacro08418 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 2.6e-09 67.4 89 34.8
Sed0005043 Sechium edule HOM05D008619 ORTHO05D000090 3.3e-09 67.0 71 73.2
vmacro08419 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 4.4e-09 66.6 95 33.7
Hma1.2p1_1276F.1_g272060 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 5.7e-09 66.2 93 34.4
vmacro08421 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 5.7e-09 66.2 93 34.4
CsaV3_7G022190 Cucumis sativus L. HOM05D008619 ORTHO05D000090 1.3e-08 65.1 39 74.4
Hma1.2p1_0310F.1_g120960 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 1.7e-08 64.7 93 33.3
vmacro15413 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 1.7e-08 64.7 94 36.2
CSS0041306 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 2.2e-08 64.3 96 32.3
RcHm_v2.0_Chr5g0077521 Rosa chinensis HOM05D000162 ORTHO05D000090 2.2e-08 64.3 92 33.7
ClCG09G008330 Citrullus lanatus HOM05D008619 ORTHO05D000090 2.8e-08 63.9 41 73.2
MELO3C012708.2 Cucumis melo HOM05D008619 ORTHO05D000090 2.8e-08 63.9 39 74.4
MELO3C028907.2 Cucumis melo HOM05D008619 ORTHO05D010307 2.8e-08 63.9 45 68.9
Rhsim04G0181900 Rhododendron simsii HOM05D000162 ORTHO05D000090 2.8e-08 63.9 96 34.4
FAN24G2639 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.7e-08 63.5 41 65.9
MBI11_g34857_MAGBIO Magnolia biondii HOM05D000162 ORTHO05D000090 3.7e-08 63.5 93 36.6
Nn1g02624 Nelumbo nucifera HOM05D000162 ORTHO05D000090 4.8e-08 63.2 88 37.5
RcHm_v2.0_Chr6g0289191 Rosa chinensis HOM05D000162 ORTHO05D000090 6.3e-08 62.8 41 65.9
vmacro08420 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 6.3e-08 62.8 93 32.3
vmacro08434 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 6.3e-08 62.8 92 32.6
ClCG09G021740 Citrullus lanatus HOM05D016535 ORTHO05D000090 8.2e-08 62.4 69 50.7
Rhsim04G0181600 Rhododendron simsii HOM05D000162 ORTHO05D000090 8.2e-08 62.4 93 36.6
Actinidia04475 Actinidia chinensis HOM05D000162 ORTHO05D000090 1.1e-07 62.0 94 34.0
CSS0012675 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 1.1e-07 62.0 93 31.2
ECA232G4999 Erigeron canadensis HOM05D000162 ORTHO05D000090 1.1e-07 62.0 92 34.8
RcHm_v2.0_Chr5g0071481 Rosa chinensis HOM05D000162 ORTHO05D000090 1.8e-07 61.2 97 30.9
ClCG01G008120 Citrullus lanatus HOM05D008619 ORTHO05D000090 2.4e-07 60.8 63 79.4
COL.COLO4_20322 Corchorus olitorius HOM05D000162 ORTHO05D000090 2.4e-07 60.8 95 31.6
FAN27G0396 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.4e-07 60.8 40 65.0
MELO3C015787.2 Cucumis melo HOM05D016535 ORTHO05D018164 3.1e-07 60.5 49 57.1
ECA232G1497 Erigeron canadensis HOM05D000162 ORTHO05D000090 3.1e-07 60.5 97 32.0
FAN11G3989 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.1e-07 60.1 97 30.9
Hma1.2p1_1076F.1_g254530 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 4.1e-07 60.1 93 29.0
Sed0014077 Sechium edule HOM05D008619 ORTHO05D000090 4.1e-07 60.1 68 77.9
RcHm_v2.0_Chr5g0073761 Rosa chinensis HOM05D000162 ORTHO05D000090 5.3e-07 59.7 97 32.0
Sc05g0000860 Simmondsia chinensis HOM05D000162 ORTHO05D000090 5.3e-07 59.7 100 34.0
vmacro05074 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 5.3e-07 59.7 87 35.6
vmacro13797 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 5.3e-07 59.7 93 33.3
CANSAT80G1240 Cannabis sativa HOM05D000162 ORTHO05D000090 7.0e-07 59.3 45 51.1
CANSAT80G2501 Cannabis sativa HOM05D000162 ORTHO05D000090 7.0e-07 59.3 45 51.1
Haze_13083 Corylus avellana HOM05D004838 ORTHO05D005373 7.0e-07 59.3 80 37.5
Lsat_1_v5_gn_1_11620 Lactuca sativa HOM05D000162 ORTHO05D000090 7.0e-07 59.3 95 29.5
MD11G1115600 Malus domestica HOM05D000162 ORTHO05D000090 7.0e-07 59.3 97 30.9
Actinidia04470 Actinidia chinensis HOM05D000162 ORTHO05D000090 9.1e-07 58.9 96 28.1
ClCG01G008220 Citrullus lanatus HOM05D008619 ORTHO05D000090 1.2e-06 58.5 61 80.3
Cc07_g19010 Coffea canephora HOM05D000162 ORTHO05D000090 1.2e-06 58.5 100 34.0
FvH4_2g22260 Fragaria vesca HOM05D000162 ORTHO05D000090 1.2e-06 58.5 39 64.1
HanXRQChr14g0435461 Helianthus annuus HOM05D000162 ORTHO05D000090 1.2e-06 58.5 92 34.8
Cc07_g18980 Coffea canephora HOM05D000162 ORTHO05D000090 1.6e-06 58.2 100 34.0
FAN05G1965 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.6e-06 58.2 95 31.6
HanXRQChr10g0281361 Helianthus annuus HOM05D000162 ORTHO05D000090 1.6e-06 58.2 98 31.6
QL04p081370 Quercus lobata HOM05D000162 ORTHO05D000090 1.6e-06 58.2 40 62.5
Sed0025833 Sechium edule HOM05D008619 ORTHO05D025208 1.6e-06 58.2 155 87.1
vmacro13800 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 1.6e-06 58.2 93 33.3
Haze_24551 Corylus avellana HOM05D000162 ORTHO05D000090 2.0e-06 57.8 40 67.5
Atru.chr12.1036 Acer truncatum HOM05D007410 ORTHO05D009500 2.6e-06 57.4 117 29.9
Actinidia08438 Actinidia chinensis HOM05D000162 ORTHO05D000090 2.6e-06 57.4 87 33.3
COL.COLO4_21653 Corchorus olitorius HOM05D000162 ORTHO05D000090 2.6e-06 57.4 95 32.6
ECA240G4389 Erigeron canadensis HOM05D000162 ORTHO05D000090 2.6e-06 57.4 97 30.9
FvH4_3g37480 Fragaria vesca HOM05D000162 ORTHO05D000090 2.6e-06 57.4 93 31.2
HanXRQChr11g0341941 Helianthus annuus HOM05D000162 ORTHO05D000090 2.6e-06 57.4 92 31.5
FAN11G2213 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.5e-06 57.0 93 31.2
Hma1.2p1_0310F.1_g120980 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 3.5e-06 57.0 93 28.0
vmacro08467 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 3.5e-06 57.0 93 33.3
Hma1.2p1_1076F.1_g254520 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 4.5e-06 56.6 89 29.2
Medtr7g095300 Medicago truncatula HOM05D000162 ORTHO05D000090 4.5e-06 56.6 98 32.7
EL10Ac4g09443 Beta vulgaris HOM05D000162 ORTHO05D000090 5.9e-06 56.2 93 32.3
FAN21G3095 Fragaria x ananassa HOM05D000162 ORTHO05D000090 5.9e-06 56.2 97 29.9
THA.LOC104808474 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 5.9e-06 56.2 102 35.3
ECA240G4817 Erigeron canadensis HOM05D000162 ORTHO05D000090 7.7e-06 55.8 97 30.9
HanXRQChr03g0083291 Helianthus annuus HOM05D000162 ORTHO05D000090 7.7e-06 55.8 87 29.9
Hma1.2p1_2917F.1_g330330 Hydrangea macrophylla HOM05D000162 ORTHO05D023753 7.7e-06 55.8 97 33.0


User provided reference genes

Program Settings