Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014857 Sechium edule HOM05D005871 ORTHO05D003654 1.6e-110 402.9 225 100.0
CsaV3_7G015020 Cucumis sativus L. HOM05D005871 ORTHO05D003654 2.0e-28 130.2 247 45.3
Haze_09808 Corylus avellana HOM05D005871 ORTHO05D003654 1.1e-26 124.4 232 44.4
MELO3C024925.2 Cucumis melo HOM05D005871 ORTHO05D003654 3.2e-26 122.9 241 47.3
Cfa020208 Carpinus fangiana HOM05D005871 ORTHO05D003654 5.5e-26 122.1 225 44.4
Thecc.07G015800 Theobroma cacao HOM05D005871 ORTHO05D003654 9.7e-23 111.3 267 35.2
COL.COLO4_09813 Corchorus olitorius HOM05D005871 ORTHO05D003654 8.2e-22 108.2 261 34.9
Duzib170G1062 Durio zibethinus HOM05D005871 ORTHO05D003654 1.8e-21 107.1 233 38.6
Gohir.A04G006400 Gossypium hirsutum HOM05D005871 ORTHO05D003654 1.1e-18 97.8 234 37.2
Manes.03G140300 Manihot esculenta HOM05D005871 ORTHO05D003654 3.2e-18 96.3 263 37.6
Gohir.D05G383000 Gossypium hirsutum HOM05D005871 ORTHO05D003654 4.2e-18 95.9 234 39.3
TWI38G0819 Tripterygium wilfordii HOM05D005871 ORTHO05D003654 7.2e-18 95.1 220 35.9
CiPaw.12G137100 Carya illinoinensis HOM05D005871 ORTHO05D003654 9.4e-18 94.7 232 37.5
Manes.03G140301 Manihot esculenta HOM05D005871 ORTHO05D003654 1.6e-17 94.0 262 37.0
Gorai.009G449600 Gossypium raimondii HOM05D005871 ORTHO05D003654 3.6e-17 92.8 241 36.9
Gohir.D08G035400 Gossypium hirsutum HOM05D005871 ORTHO05D003654 6.1e-17 92.0 236 34.7
TWI39G0465 Tripterygium wilfordii HOM05D005871 ORTHO05D003654 6.1e-17 92.0 233 34.3
ClCG09G021220 Citrullus lanatus HOM05D005871 ORTHO05D003654 1.8e-16 90.5 169 44.4
Gorai.004G033400 Gossypium raimondii HOM05D005871 ORTHO05D003654 1.8e-16 90.5 238 33.2
Prupe.4G241600 Prunus persica HOM05D005871 ORTHO05D003654 1.8e-16 90.5 221 38.9
Nn1g03208 Nelumbo nucifera HOM05D005871 ORTHO05D003654 2.3e-16 90.1 213 34.3
Gohir.D05G383100 Gossypium hirsutum HOM05D005871 ORTHO05D003654 3.0e-16 89.7 245 36.3
QL08p004709 Quercus lobata HOM05D005871 ORTHO05D003654 3.0e-16 89.7 249 36.5
Gohir.D05G382950 Gossypium hirsutum HOM05D005871 ORTHO05D003654 6.7e-16 88.6 218 33.5
Gorai.009G449500 Gossypium raimondii HOM05D005871 ORTHO05D003654 6.7e-16 88.6 218 33.5
Psat0s4683g0040 Pisum sativum HOM05D005871 ORTHO05D003654 2.0e-15 87.0 259 36.7
CiPaw.11G202600 Carya illinoinensis HOM05D005871 ORTHO05D003654 4.4e-15 85.9 243 36.2
Nn1g07488 Nelumbo nucifera HOM05D005871 ORTHO05D003654 4.4e-15 85.9 211 35.5
MD03G1184900 Malus domestica HOM05D005871 ORTHO05D003654 7.4e-15 85.1 231 38.1
TAR626G0615 Trochodendron aralioides HOM05D005871 ORTHO05D003654 9.7e-15 84.7 227 34.4
Gorai.009G449400 Gossypium raimondii HOM05D005871 ORTHO05D003654 1.7e-14 84.0 231 35.5
TPR.G35473 Trifolium pratense HOM05D005871 ORTHO05D003654 2.8e-14 83.2 209 37.3
Gohir.D05G382900 Gossypium hirsutum HOM05D005871 ORTHO05D003654 6.3e-14 82.0 232 37.5
Gohir.A08G024900 Gossypium hirsutum HOM05D005871 ORTHO05D003654 8.2e-14 81.6 236 33.1
Phvul.006G056300 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 8.2e-14 81.6 265 34.0
Glyma.08G328600 Glycine max HOM05D005871 ORTHO05D003654 1.8e-13 80.5 268 34.7
TPR.G8607 Trifolium pratense HOM05D005871 ORTHO05D003654 1.8e-13 80.5 249 37.8
Glyma.18G078200 Glycine max HOM05D005871 ORTHO05D003654 3.1e-13 79.7 270 33.0
Manes.15G061300 Manihot esculenta HOM05D005871 ORTHO05D003654 5.3e-13 79.0 201 33.8
Medtr5g095630 Medicago truncatula HOM05D005871 ORTHO05D003654 7.0e-13 78.6 240 40.4
Lj6g0021132 Lotus japonicus HOM05D005871 ORTHO05D003654 1.2e-12 77.8 256 31.2
FAN02G3820 Fragaria x ananassa HOM05D005871 ORTHO05D003654 1.6e-12 77.4 203 36.5
TPR.G8596 Trifolium pratense HOM05D005871 ORTHO05D003654 1.6e-12 77.4 237 36.3
Medtr5g095540 Medicago truncatula HOM05D005871 ORTHO05D003654 2.6e-12 76.6 282 30.9
CANSAT11G0434 Cannabis sativa HOM05D005871 ORTHO05D003654 1.3e-11 74.3 93 47.3
Lj6g0021470 Lotus japonicus HOM05D005871 ORTHO05D003654 2.2e-11 73.6 264 30.7
Potri.001G366500 Populus trichocarpa HOM05D005871 ORTHO05D003654 2.2e-11 73.6 257 30.4
VMungo0540G2170 Vigna mungo HOM05D005871 ORTHO05D003654 2.2e-11 73.6 262 35.5
Hma1.2p1_0657F.1_g196840 Hydrangea macrophylla HOM05D005871 ORTHO05D003654 2.9e-11 73.2 240 30.8
Cpa.g.sc12.163 Carica papaya HOM05D005871 ORTHO05D003654 3.8e-11 72.8 241 33.6
VMungo0647G1579 Vigna mungo HOM05D005871 ORTHO05D003654 3.8e-11 72.8 256 32.4
Duzib133G1309 Durio zibethinus HOM05D008806 ORTHO05D003654 1.5e-10 70.9 211 30.8
Psat2g008040 Pisum sativum HOM05D005871 ORTHO05D003654 1.5e-10 70.9 252 35.3
Thecc.01G195400 Theobroma cacao HOM05D008806 ORTHO05D003654 1.9e-10 70.5 211 31.3
Glyma.02G299500 Glycine max HOM05D005871 ORTHO05D003654 2.5e-10 70.1 253 30.4
Ah.04g166520 Amaranthus hybridus HOM05D005871 ORTHO05D003654 3.2e-10 69.7 230 33.5
Sabra16G0239800 Salix brachista HOM05D005871 ORTHO05D003654 4.2e-10 69.3 241 30.7
Lalb_Chr04g0247911 Lupinus albus HOM05D005871 ORTHO05D003654 5.5e-10 68.9 264 29.9
Lalb_Chr18g0057151 Lupinus albus HOM05D005871 ORTHO05D003654 5.5e-10 68.9 248 31.0
Eucgr.F02056 Eucalyptus grandis HOM05D005871 ORTHO05D003654 7.2e-10 68.6 264 30.3
Thhalv10021559m.g Eutrema salsugineum HOM05D010616 ORTHO05D003654 9.4e-10 68.2 216 29.6
Sp3g11300 Schrenkiella parvula HOM05D010616 ORTHO05D003654 9.4e-10 68.2 195 32.8
Glyma.14G014200 Glycine max HOM05D005871 ORTHO05D003654 1.2e-09 67.8 254 33.1
QL06p003419 Quercus lobata HOM05D008806 ORTHO05D003654 1.2e-09 67.8 240 31.7
Ah.09g234010 Amaranthus hybridus HOM05D005871 ORTHO05D003654 1.6e-09 67.4 234 31.2
MSTRG.6992 Avicennia marina HOM05D018445 ORTHO05D003654 1.6e-09 67.4 246 32.5
Phvul.008G278200 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 1.6e-09 67.4 233 30.0
TAR629G2179 Trochodendron aralioides HOM05D005871 ORTHO05D003654 1.6e-09 67.4 132 37.9
Duzib138G0120 Durio zibethinus HOM05D008806 ORTHO05D003654 2.1e-09 67.0 203 30.5
FAN09G0572 Fragaria x ananassa HOM05D008806 ORTHO05D003654 2.1e-09 67.0 171 33.3
TPR.G10004 Trifolium pratense HOM05D005871 ORTHO05D003654 2.1e-09 67.0 212 29.2
TWI38G1492 Tripterygium wilfordii HOM05D005871 ORTHO05D003654 2.7e-09 66.6 229 30.6
Phvul.006G140600 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 4.7e-09 65.9 241 27.0
QL08p028006 Quercus lobata HOM05D008806 ORTHO05D003654 6.1e-09 65.5 211 34.6
DCAR_022606 Daucus carota HOM05D005871 ORTHO05D003654 8.0e-09 65.1 256 30.5
SalBow8G3140 Salvia bowleyana HOM05D005871 ORTHO05D003654 8.0e-09 65.1 206 31.6
THA.LOC104810289 Tarenaya hassleriana HOM05D010616 ORTHO05D003654 1.0e-08 64.7 218 31.2
Atru.chr2.3672 Acer truncatum HOM05D005871 ORTHO05D003654 1.8e-08 63.9 77 51.9
PGR083G2866 Punica granatum HOM05D005871 ORTHO05D003654 1.8e-08 63.9 272 25.7
TAR629G1912 Trochodendron aralioides HOM05D005871 ORTHO05D003654 1.8e-08 63.9 205 37.6
Psat2g007960 Pisum sativum HOM05D005871 ORTHO05D003654 2.3e-08 63.5 255 34.9
Eucgr.F02055 Eucalyptus grandis HOM05D005871 ORTHO05D003654 5.2e-08 62.4 246 28.5
A05p36410 Brassica napus HOM05D010616 ORTHO05D003654 6.7e-08 62.0 217 29.5
CAN.G337.14 Capsicum annuum HOM05D033747 ORTHO05D033984 6.7e-08 62.0 236 33.9
BcaNung05271 Brassica carinata HOM05D010616 ORTHO05D003654 8.8e-08 61.6 213 30.0
QL05p068166 Quercus lobata HOM05D005871 ORTHO05D003654 8.8e-08 61.6 227 30.0
PGSC0003DMG400017373 Solanum tuberosum HOM05D016037 ORTHO05D003654 8.8e-08 61.6 196 30.6
VMungo0540G0718 Vigna mungo HOM05D005871 ORTHO05D003654 8.8e-08 61.6 234 27.8
BraA05t22441Z Brassica rapa HOM05D010616 ORTHO05D003654 1.1e-07 61.2 222 29.3
Cfa014230 Carpinus fangiana HOM05D008806 ORTHO05D003654 1.1e-07 61.2 196 32.7
Solyc07g045530.2 Solanum lycopersicum HOM05D016037 ORTHO05D003654 1.1e-07 61.2 206 31.6
BcaC05g29208 Brassica carinata HOM05D010616 ORTHO05D003654 1.5e-07 60.8 209 28.2
C05p54810 Brassica napus HOM05D010616 ORTHO05D003654 1.5e-07 60.8 209 28.2
BolC5t34153H Brassica oleracea HOM05D010616 ORTHO05D003654 1.5e-07 60.8 209 28.2
FAN05G0544 Fragaria x ananassa HOM05D008806 ORTHO05D003654 1.5e-07 60.8 167 31.7
SGA_v2.0_scaffold73G24498 Striga asiatica HOM05D016037 ORTHO05D003654 1.5e-07 60.8 209 31.1
Gohir.A07G191600 Gossypium hirsutum HOM05D008806 ORTHO05D003654 2.0e-07 60.5 213 28.2
Medtr2g026565 Medicago truncatula HOM05D005871 ORTHO05D003654 2.0e-07 60.5 240 29.2
Ciclev10016749m.g Citrus clementina HOM05D008806 ORTHO05D003654 2.6e-07 60.1 207 30.4
FvH4_6g40700 Fragaria vesca HOM05D008806 ORTHO05D003654 2.6e-07 60.1 211 31.3
Sed0022932 Sechium edule HOM05D008806 ORTHO05D003654 2.6e-07 60.1 198 32.3
Gorai.001G221500 Gossypium raimondii HOM05D008806 ORTHO05D003654 3.3e-07 59.7 200 27.0
Psat1g173400 Pisum sativum HOM05D005871 ORTHO05D003654 3.3e-07 59.7 208 29.3
Gohir.D07G198000 Gossypium hirsutum HOM05D008806 ORTHO05D003654 4.4e-07 59.3 204 29.4
Gorai.001G221600 Gossypium raimondii HOM05D008806 ORTHO05D003654 4.4e-07 59.3 204 29.4
PSO675G2590 Papaver somniferum HOM05D063809 ORTHO05D003654 5.7e-07 58.9 255 34.5
Ah.06g181330 Amaranthus hybridus HOM05D005871 ORTHO05D003654 7.5e-07 58.5 229 33.2
Migut.M01661 Erythranthe guttata HOM05D018445 ORTHO05D021546 1.3e-06 57.8 229 33.2
Gohir.D07G197900 Gossypium hirsutum HOM05D008806 ORTHO05D003654 1.3e-06 57.8 200 27.0
Prupe.3G198500 Prunus persica HOM05D008806 ORTHO05D003654 1.3e-06 57.8 237 33.8
Sabra14G0126900 Salix brachista HOM05D008806 ORTHO05D003654 1.3e-06 57.8 207 31.9
Sp3g23290 Schrenkiella parvula HOM05D011557 ORTHO05D013745 2.2e-06 57.0 214 25.2
MELO3C028684.2 Cucumis melo HOM05D008806 ORTHO05D003654 2.8e-06 56.6 200 37.0
AT3G13130 Arabidopsis thaliana HOM05D010616 ORTHO05D003654 4.8e-06 55.8 227 30.4
SalBow7G0966 Salvia bowleyana HOM05D005871 ORTHO05D003654 4.8e-06 55.8 198 28.8
BcaB06g25485 Brassica carinata HOM05D010616 ORTHO05D003654 6.3e-06 55.5 222 29.7
arahy.Tifrunner.gnm1.ann1.C2C6BR Arachis hypogaea HOM05D005871 ORTHO05D003654 8.2e-06 55.1 87 46.0
CiPaw.03G281200 Carya illinoinensis HOM05D005871 ORTHO05D003654 8.2e-06 55.1 205 33.2


User provided reference genes

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