Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014792 Sechium edule HOM05D008002 ORTHO05D010148 5.3e-113 411.0 202 100.0
CsaV3_7G002100 Cucumis sativus L. HOM05D008002 ORTHO05D010148 2.5e-78 295.8 205 74.1
MELO3C015697.2 Cucumis melo HOM05D008002 ORTHO05D010148 3.3e-78 295.4 206 75.2
ClCG02G003270 Citrullus lanatus HOM05D008002 ORTHO05D010148 1.5e-51 206.8 202 57.4
CiPaw.05G094700 Carya illinoinensis HOM05D008002 ORTHO05D010148 9.9e-51 204.1 168 61.3
Gohir.D04G151600 Gossypium hirsutum HOM05D008002 ORTHO05D010148 6.4e-50 201.4 192 53.6
Thecc.02G147800 Theobroma cacao HOM05D008002 ORTHO05D010148 6.4e-50 201.4 213 53.1
Duzib132G1147 Durio zibethinus HOM05D008002 ORTHO05D010148 8.3e-50 201.1 181 55.8
Gohir.D02G193300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.4e-49 200.3 213 52.1
Gorai.012G138300 Gossypium raimondii HOM05D008002 ORTHO05D010148 1.4e-49 200.3 192 53.6
Gohir.A04G111300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 5.4e-49 198.4 192 52.6
Gohir.A03G170200 Gossypium hirsutum HOM05D008002 ORTHO05D010148 7.1e-49 198.0 192 54.7
FAN27G2383 Fragaria x ananassa HOM05D008002 ORTHO05D010148 9.2e-49 197.6 213 54.5
MD05G1143100 Malus domestica HOM05D008002 ORTHO05D010148 2.1e-48 196.4 210 56.2
Gorai.005G216100 Gossypium raimondii HOM05D008002 ORTHO05D010148 4.6e-48 195.3 214 50.9
FAN15G1289 Fragaria x ananassa HOM05D008002 ORTHO05D010148 7.8e-48 194.5 213 53.5
QL11p056798 Quercus lobata HOM05D000114 ORTHO05D009898 1.0e-47 194.1 230 47.4
CANSAT25G0111 Cannabis sativa HOM05D008002 ORTHO05D010148 1.7e-47 193.4 204 52.0
FvH4_2g17020 Fragaria vesca HOM05D008002 ORTHO05D010148 1.7e-47 193.4 213 54.0
Duzib248G0441 Durio zibethinus HOM05D008002 ORTHO05D010148 2.3e-47 193.0 196 51.0
Hund00100 Selenicereus undatus HOM05D008002 ORTHO05D010148 2.3e-47 193.0 158 59.5
GSVIVG01023858001 Vitis vinifera HOM05D008002 ORTHO05D010148 3.9e-47 192.2 207 51.7
RcHm_v2.0_Chr6g0281201 Rosa chinensis HOM05D008002 ORTHO05D010148 1.5e-46 190.3 214 53.3
FAN24G1487 Fragaria x ananassa HOM05D008002 ORTHO05D010148 2.5e-46 189.5 210 53.8
Eucgr.I01542 Eucalyptus grandis HOM05D008002 ORTHO05D010148 4.3e-46 188.7 147 63.9
Gorai.013G065000 Gossypium raimondii HOM05D008002 ORTHO05D010148 4.3e-46 188.7 213 52.1
Potri.009G169400 Populus trichocarpa HOM05D008002 ORTHO05D010148 4.3e-46 188.7 147 59.2
COL.COLO4_03847 Corchorus olitorius HOM05D008002 ORTHO05D010148 5.6e-46 188.3 166 57.8
Gohir.D13G057750 Gossypium hirsutum HOM05D008002 ORTHO05D010148 7.3e-46 188.0 213 52.6
TAR376G1088 Trochodendron aralioides HOM05D008002 ORTHO05D010148 1.2e-45 187.2 202 53.5
Sabra04G0140100 Salix brachista HOM05D008002 ORTHO05D010148 1.6e-45 186.8 178 57.3
TWI75G0824 Tripterygium wilfordii HOM05D008002 ORTHO05D010148 1.6e-45 186.8 146 62.3
Prupe.8G181900 Prunus persica HOM05D008002 ORTHO05D010148 4.7e-45 185.3 209 54.1
MD10G1142900 Malus domestica HOM05D008002 ORTHO05D010148 1.1e-44 184.1 209 52.6
Actinidia17988 Actinidia chinensis HOM05D008002 ORTHO05D010148 1.8e-44 183.3 202 51.5
Potri.004G208200 Populus trichocarpa HOM05D008002 ORTHO05D010148 2.4e-44 183.0 180 53.3
Haze_01959 Corylus avellana HOM05D008002 ORTHO05D010148 3.1e-44 182.6 177 56.5
Rhsim11G0198500 Rhododendron simsii HOM05D008002 ORTHO05D010148 1.2e-43 180.6 170 53.5
Sc08g0002060 Simmondsia chinensis HOM05D008002 ORTHO05D010148 7.6e-43 177.9 210 48.6
Cfa005392 Carpinus fangiana HOM05D008002 ORTHO05D010148 9.9e-43 177.6 146 61.0
Dinv14183 Davidia involucrata HOM05D008002 ORTHO05D010148 4.9e-42 175.3 207 52.7
Nn8g40377 Nelumbo nucifera HOM05D008002 ORTHO05D010148 6.4e-42 174.9 210 49.5
Nn2g12628 Nelumbo nucifera HOM05D008002 ORTHO05D010148 3.2e-41 172.6 210 50.0
Lsat_1_v5_gn_3_48401 Lactuca sativa HOM05D008002 ORTHO05D010148 5.4e-41 171.8 146 55.5
Atru.chr5.3576 Acer truncatum HOM05D008002 ORTHO05D010148 9.3e-41 171.0 207 48.8
CiPaw.06G114200 Carya illinoinensis HOM05D008002 ORTHO05D010148 1.6e-40 170.2 200 46.5
Actinidia20583 Actinidia chinensis HOM05D008002 ORTHO05D010148 4.6e-40 168.7 202 51.0
Haze_01969 Corylus avellana HOM05D008002 ORTHO05D010148 6.0e-40 168.3 165 53.3
PSO541G1248 Papaver somniferum HOM05D008002 ORTHO05D010148 3.3e-38 162.5 214 45.8
PGR142G3621 Punica granatum HOM05D008002 ORTHO05D010148 3.3e-38 162.5 176 50.0
AT4G38213 Arabidopsis thaliana HOM05D008002 ORTHO05D010148 3.4e-35 152.5 161 49.7
Ciclev10029829m.g Citrus clementina HOM05D008002 ORTHO05D010148 7.6e-35 151.4 207 47.3
Thhalv10027398m.g Eutrema salsugineum HOM05D008002 ORTHO05D010148 4.9e-34 148.7 138 55.1
Oeu006116.1 Olea europaea HOM05D008002 ORTHO05D010148 4.9e-34 148.7 195 43.1
Carub.0007s0013 Capsella rubella HOM05D008002 ORTHO05D010148 8.4e-34 147.9 146 52.7
CSS0003373 Camellia sinensis var. sinensis HOM05D008002 ORTHO05D010148 3.2e-33 146.0 110 63.6
Aqoxy6G02976 Aquilegia oxysepala HOM05D008002 ORTHO05D010148 7.8e-32 141.4 243 41.2
Sp7g37530 Schrenkiella parvula HOM05D008002 ORTHO05D010148 2.3e-31 139.8 167 44.9
SEGI_35818 Sequoiadendron giganteum HOM05D008002 ORTHO05D010148 1.1e-30 137.5 171 43.9
HanXRQChr15g0490081 Helianthus annuus HOM05D008002 ORTHO05D010148 2.4e-28 129.8 112 54.5
Zm00001eb035270 Zea mays HOM05D008002 ORTHO05D010148 2.6e-27 126.3 163 44.8
Eucgr.H05000 Eucalyptus grandis HOM05D008002 ORTHO05D010148 3.4e-27 125.9 194 39.7
PSO675G9248 Papaver somniferum HOM05D008002 ORTHO05D010148 3.4e-27 125.9 212 40.6
MBI17_g13390_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 1.2e-24 117.5 99 55.6
HanXRQChr15g0479771 Helianthus annuus HOM05D008002 ORTHO05D010148 2.7e-24 116.3 111 53.2
AL7G10120 Arabidopsis lyrata HOM05D008002 ORTHO05D010148 6.0e-24 115.2 122 50.8
Os08g0512100 Oryza sativa ssp. japonica HOM05D008002 ORTHO05D010148 1.3e-23 114.0 169 39.1
CDE10G0514 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 3.9e-23 112.5 183 41.5
TAR628G1479 Trochodendron aralioides HOM05D008002 ORTHO05D010148 3.9e-23 112.5 91 62.6
ATR0763G180 Amborella trichopoda HOM05D008002 ORTHO05D010148 4.3e-22 109.0 106 54.7
HPP92_007470 Vanilla planifolia HOM05D008002 ORTHO05D010148 4.3e-22 109.0 159 39.0
MBI01_g17256_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 4.8e-21 105.5 86 58.1
CARHR293990 Cardamine hirsuta HOM05D008002 ORTHO05D010148 5.3e-20 102.1 114 48.2
MBI12_g13710_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 4.5e-19 99.0 90 55.6
MBI03_g24838_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 1.0e-18 97.8 89 55.1
MBI18_g48147_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 8.4e-18 94.7 91 54.9
Gohir.A13G064166 Gossypium hirsutum HOM05D008002 ORTHO05D010148 3.5e-16 89.4 82 54.9
CDE10G0941 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 1.3e-15 87.4 92 51.1


User provided reference genes

Program Settings