Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014780 Sechium edule HOM05D005645 ORTHO05D007156 2.1e-196 688.7 324 100.0
ClCG10G010870 Citrullus lanatus HOM05D005645 ORTHO05D007156 9.9e-170 600.1 330 86.1
CsaV3_4G000750 Cucumis sativus L. HOM05D005645 ORTHO05D007156 1.5e-165 586.3 335 82.7
Sed0022873 Sechium edule HOM05D005645 ORTHO05D007156 9.3e-152 540.4 326 78.8
Dinv19699 Davidia involucrata HOM05D005645 ORTHO05D007156 2.2e-140 502.7 335 70.7
CSS0005125 Camellia sinensis var. sinensis HOM05D005645 ORTHO05D007156 7.7e-138 494.2 329 72.0
CANSAT25G0541 Cannabis sativa HOM05D005645 ORTHO05D007156 1.7e-137 493.0 329 70.5
Hma1.2p1_0491F.1_g164480 Hydrangea macrophylla HOM05D005645 ORTHO05D007156 4.2e-136 488.4 344 69.2
MD03G1287400 Malus domestica HOM05D005645 ORTHO05D007156 7.2e-136 487.6 341 67.4
Atru.chr5.1154 Acer truncatum HOM05D005645 ORTHO05D007156 3.9e-134 481.9 325 68.6
Lj2P1193T28 Lonicera japonica HOM05D005645 ORTHO05D007156 1.5e-133 479.9 331 68.6
Ciclev10021114m.g Citrus clementina HOM05D005645 ORTHO05D007156 4.3e-133 478.4 335 69.0
COL.COLO4_23354 Corchorus olitorius HOM05D005645 ORTHO05D007156 5.7e-133 478.0 328 69.2
Duzib138G1290 Durio zibethinus HOM05D005645 ORTHO05D007156 2.8e-132 475.7 332 69.3
Cc01_g20770 Coffea canephora HOM05D005645 ORTHO05D007156 3.7e-132 475.3 328 69.5
Thecc.01G299500 Theobroma cacao HOM05D005645 ORTHO05D007156 8.2e-132 474.2 332 68.7
Rhsim01G0284600 Rhododendron simsii HOM05D005645 ORTHO05D007156 4.1e-131 471.9 339 68.1
Manes.05G062500 Manihot esculenta HOM05D005645 ORTHO05D007156 1.2e-130 470.3 324 68.5
Duzib133G0671 Durio zibethinus HOM05D005645 ORTHO05D007156 4.5e-130 468.4 332 67.5
Prupe.8G260500 Prunus persica HOM05D005645 ORTHO05D007156 1.3e-129 466.8 328 67.1
Gohir.D08G085100 Gossypium hirsutum HOM05D005645 ORTHO05D007156 2.2e-129 466.1 333 67.3
RcHm_v2.0_Chr6g0293871 Rosa chinensis HOM05D005645 ORTHO05D007156 2.2e-129 466.1 326 69.0
Gohir.A08G075600 Gossypium hirsutum HOM05D005645 ORTHO05D007156 2.5e-128 462.6 333 67.0
MBI19_g25350_MAGBIO Magnolia biondii HOM05D005645 ORTHO05D007156 3.2e-128 462.2 338 64.8
MD11G1310800 Malus domestica HOM05D005645 ORTHO05D007156 4.2e-128 461.8 346 63.9
Gorai.004G089600 Gossypium raimondii HOM05D005645 ORTHO05D007156 9.4e-128 460.7 333 66.7
TWI23G0499 Tripterygium wilfordii HOM05D005645 ORTHO05D007156 9.4e-128 460.7 332 66.9
PGR119G1100 Punica granatum HOM05D005645 ORTHO05D007156 1.0e-126 457.2 333 67.6
Dinv33051 Davidia involucrata HOM05D005645 ORTHO05D007156 3.0e-126 455.7 310 70.3
Eucgr.H01116 Eucalyptus grandis HOM05D005645 ORTHO05D007156 3.0e-126 455.7 346 63.9
DCAR_002826 Daucus carota HOM05D005645 ORTHO05D007156 9.7e-125 450.7 343 64.1
Cpa.g.c27813 Carica papaya HOM05D005645 ORTHO05D007156 1.3e-124 450.3 326 66.9
CiPaw.08G095700 Carya illinoinensis HOM05D005645 ORTHO05D007156 3.7e-124 448.7 335 64.5
Actinidia21051 Actinidia chinensis HOM05D005645 ORTHO05D007156 6.3e-124 448.0 310 68.7
Nitab4.5_0001879g0020 Nicotiana tabacum HOM05D005645 ORTHO05D007156 6.3e-124 448.0 336 66.4
Cfa005921 Carpinus fangiana HOM05D005645 ORTHO05D007156 1.8e-123 446.4 342 63.7
Sopen09g029900 Solanum pennellii HOM05D005645 ORTHO05D007156 3.1e-123 445.7 326 66.9
TAR365G0052 Trochodendron aralioides HOM05D005645 ORTHO05D007156 1.5e-122 443.4 329 65.0
Duzib211G0390 Durio zibethinus HOM05D005645 ORTHO05D007156 2.0e-122 443.0 332 64.2
Solyc09g075080.3 Solanum lycopersicum HOM05D005645 ORTHO05D007156 2.6e-122 442.6 326 66.9
PGSC0003DMG400011401 Solanum tuberosum HOM05D005645 ORTHO05D007156 4.5e-122 441.8 332 65.7
Migut.D00211 Erythranthe guttata HOM05D005645 ORTHO05D007156 5.9e-122 441.4 329 64.7
HanXRQChr04g0118021 Helianthus annuus HOM05D005645 ORTHO05D007156 1.7e-121 439.9 337 62.6
Potri.002G205150 Populus trichocarpa HOM05D005645 ORTHO05D007156 1.7e-121 439.9 330 64.8
Lsat_1_v5_gn_5_191140 Lactuca sativa HOM05D005645 ORTHO05D007156 5.0e-121 438.3 339 63.4
Aqoxy2G02954 Aquilegia oxysepala HOM05D005645 ORTHO05D007156 6.5e-121 438.0 332 63.9
Gorai.008G145600 Gossypium raimondii HOM05D005645 ORTHO05D007156 2.5e-120 436.0 332 63.3
Lsat_1_v5_gn_8_53521 Lactuca sativa HOM05D005645 ORTHO05D007156 2.5e-120 436.0 335 64.2
Peaxi162Scf00001g00452 Petunia axillaris HOM05D005645 ORTHO05D007156 5.5e-120 434.9 335 62.7
Gohir.A12G130800 Gossypium hirsutum HOM05D005645 ORTHO05D007156 9.4e-120 434.1 332 62.7
Sabra02G0154200 Salix brachista HOM05D005645 ORTHO05D007156 9.4e-120 434.1 330 63.6
SalBow3G0280 Salvia bowleyana HOM05D005645 ORTHO05D007156 6.1e-119 431.4 337 62.9
FvH4_2g25611 Fragaria vesca HOM05D005645 ORTHO05D007156 8.0e-119 431.0 319 64.9
Nn4g25798 Nelumbo nucifera HOM05D005645 ORTHO05D007156 8.0e-119 431.0 333 62.5
Sp6g02350 Schrenkiella parvula HOM05D005645 ORTHO05D007156 1.0e-118 430.6 343 61.5
Aa31LG5G2090 Aethionema arabicum HOM05D005645 ORTHO05D007156 1.4e-118 430.3 340 60.9
Carub.0006s3469 Capsella rubella HOM05D005645 ORTHO05D007156 1.4e-118 430.3 337 62.9
Potri.014G130000 Populus trichocarpa HOM05D005645 ORTHO05D007156 3.0e-118 429.1 332 64.2
AT4G02440 Arabidopsis thaliana HOM05D005645 ORTHO05D007156 3.9e-118 428.7 351 61.3
QL12p028562 Quercus lobata HOM05D005645 ORTHO05D007156 3.9e-118 428.7 333 63.4
FAN24G3399 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.1e-117 427.2 315 64.8
FAN27G1772 Fragaria x ananassa HOM05D005645 ORTHO05D007156 2.6e-117 426.0 319 64.9
Sabra14G0096600 Salix brachista HOM05D005645 ORTHO05D007156 2.6e-117 426.0 335 61.8
TAR370G0004 Trochodendron aralioides HOM05D005645 ORTHO05D007156 2.6e-117 426.0 332 62.7
THA.LOC109115977 Tarenaya hassleriana HOM05D005645 ORTHO05D007156 5.7e-117 424.9 340 62.6
CiPaw.07G108000 Carya illinoinensis HOM05D005645 ORTHO05D007156 7.4e-117 424.5 331 62.2
SGA_v2.0_scaffold1G00372 Striga asiatica HOM05D005645 ORTHO05D007156 9.7e-117 424.1 325 60.3
AL6G50630 Arabidopsis lyrata HOM05D005645 ORTHO05D007156 1.7e-116 423.3 343 62.7
CAN.G1628.1 Capsicum annuum HOM05D005645 ORTHO05D007156 1.7e-116 423.3 334 63.2
SGA_v2.0_scaffold2G01399 Striga asiatica HOM05D005645 ORTHO05D007156 1.8e-115 419.9 334 60.8
ECA236G0211 Erigeron canadensis HOM05D005645 ORTHO05D007156 9.1e-115 417.5 336 61.9
PSO170G2082 Papaver somniferum HOM05D005645 ORTHO05D007156 9.1e-115 417.5 338 60.9
PSO210G7211 Papaver somniferum HOM05D005645 ORTHO05D007156 9.1e-115 417.5 336 61.3
Sc09g0004020 Simmondsia chinensis HOM05D005645 ORTHO05D007156 9.1e-115 417.5 329 61.4
CARHR250710 Cardamine hirsuta HOM05D005645 ORTHO05D007156 5.9e-114 414.8 342 59.6
EL10Ac7g17501 Beta vulgaris HOM05D005645 ORTHO05D007156 1.3e-113 413.7 338 59.5
CSS0029794 Camellia sinensis var. sinensis HOM05D005645 ORTHO05D007156 1.5e-112 410.2 311 65.9
AUR62008638 Chenopodium quinoa HOM05D005645 ORTHO05D007156 6.1e-111 404.8 358 56.4
AUR62033135 Chenopodium quinoa HOM05D005645 ORTHO05D007156 1.2e-109 400.6 356 56.5
BcaB01g02041 Brassica carinata HOM05D005645 ORTHO05D007156 9.7e-109 397.5 368 55.7
HPP92_025206 Vanilla planifolia HOM05D005645 ORTHO05D007156 9.7e-109 397.5 319 60.2
Nitab4.5_0008207g0010 Nicotiana tabacum HOM05D005645 ORTHO05D007156 8.5e-105 384.4 293 64.8
Migut.N01502 Erythranthe guttata HOM05D005645 ORTHO05D007156 2.7e-103 379.4 323 57.9
VMungo1383G2661 Vigna mungo HOM05D005645 ORTHO05D007156 1.4e-102 377.1 324 59.6
C09p01980 Brassica napus HOM05D005645 ORTHO05D007156 4.0e-102 375.6 393 51.9
arahy.Tifrunner.gnm1.ann1.LF73V2 Arachis hypogaea HOM05D005645 ORTHO05D007156 1.2e-101 374.0 321 58.6
Glyma.03G214300 Glycine max HOM05D005645 ORTHO05D007156 3.4e-101 372.5 331 56.2
Phvul.001G207000 Phaseolus vulgaris HOM05D005645 ORTHO05D007156 1.3e-100 370.5 334 56.9
Lj1g0011611 Lotus japonicus HOM05D005645 ORTHO05D007156 1.7e-100 370.2 324 55.9
BcaNung04054 Brassica carinata HOM05D005645 ORTHO05D007156 2.8e-100 369.4 407 48.6
ATR0796G303 Amborella trichopoda HOM05D005645 ORTHO05D007156 1.1e-99 367.5 427 47.8
FAN15G1997 Fragaria x ananassa HOM05D005645 ORTHO05D007156 1.8e-99 366.7 289 63.3
BraA09t35841Z Brassica rapa HOM05D005645 ORTHO05D007156 4.1e-99 365.5 397 50.9
BolC9t53130H Brassica oleracea HOM05D005645 ORTHO05D007156 7.0e-99 364.8 407 48.2
Actinidia24827 Actinidia chinensis HOM05D005645 ORTHO05D007156 5.9e-98 361.7 274 65.3
GSVIVG01028000001 Vitis vinifera HOM05D005645 ORTHO05D007156 7.7e-98 361.3 324 54.6
CDE11G0431 Ceratophyllum demersum HOM05D005645 ORTHO05D007156 8.6e-97 357.8 283 61.1
A09p01900 Brassica napus HOM05D005645 ORTHO05D007156 1.5e-96 357.1 417 48.9
DCAR_018339 Daucus carota HOM05D005645 ORTHO05D007156 4.7e-95 352.1 321 54.5
MELO3C017961.2 Cucumis melo HOM05D005645 ORTHO05D007156 3.0e-94 349.4 173 89.6
Nn3g21470 Nelumbo nucifera HOM05D005645 ORTHO05D007156 4.0e-94 349.0 297 59.9
Oeu011455.1 Olea europaea HOM05D005645 ORTHO05D007156 5.7e-93 345.1 328 52.7
Lalb_Chr18g0047021 Lupinus albus HOM05D005645 ORTHO05D007156 1.6e-90 337.0 324 54.6
Ca_09155_v3 Cicer arietinum L. HOM05D005645 ORTHO05D007156 2.3e-89 333.2 322 50.9
TPR.G9640 Trifolium pratense HOM05D005645 ORTHO05D007156 7.3e-88 328.2 319 52.4
Medtr7g108820 Medicago truncatula HOM05D005645 ORTHO05D007156 8.0e-87 324.7 324 51.2
Medtr8g058520 Medicago truncatula HOM05D005645 ORTHO05D007156 8.0e-87 324.7 324 51.2
CAN.G339.1 Capsicum annuum HOM05D005645 ORTHO05D007156 3.1e-86 322.8 271 59.8
Psat3g022200 Pisum sativum HOM05D005645 ORTHO05D007156 4.4e-85 318.9 320 50.3
SHI29059 Sapria himalayana HOM05D005645 ORTHO05D007156 2.7e-82 309.7 323 49.8
Zm00001eb346660 Zea mays HOM05D005645 ORTHO05D007156 7.8e-82 308.1 354 46.6
BcaNung05002 Brassica carinata HOM05D005645 ORTHO05D007156 3.6e-79 299.3 264 60.2
Os05g0365000 Oryza sativa ssp. japonica HOM05D005645 ORTHO05D007156 3.7e-76 289.3 333 46.5
Mapoly0034s0045 Marchantia polymorpha HOM05D005645 ORTHO05D007156 8.3e-76 288.1 397 41.1
Lalb_Chr06g0163461 Lupinus albus HOM05D005645 ORTHO05D007156 5.4e-75 285.4 326 46.6
Pp3c4_3650 Physcomitrium patens HOM05D005645 ORTHO05D007156 1.2e-74 284.3 376 43.1
SEGI_05916 Sequoiadendron giganteum HOM05D005645 ORTHO05D007156 1.7e-73 280.4 494 36.8
AagrBONN_evm.TU.Sc2ySwM_228.5415 Anthoceros agrestis HOM05D005645 ORTHO05D007156 3.0e-73 279.6 422 38.4
Glyma.02G018450 Glycine max HOM05D005645 ORTHO05D007156 1.5e-72 277.3 324 45.4
VMungo0720G2164 Vigna mungo HOM05D005645 ORTHO05D007156 2.9e-68 263.1 319 44.5
Phvul.007G146000 Phaseolus vulgaris HOM05D005645 ORTHO05D007156 3.7e-68 262.7 322 45.0
Pp3c12_6520 Physcomitrium patens HOM05D005645 ORTHO05D007156 9.2e-67 258.1 425 35.5
SMO331G0040 Selaginella moellendorffii HOM05D005645 ORTHO05D007156 6.6e-65 251.9 326 41.7
arahy.Tifrunner.gnm1.ann1.UILT17 Arachis hypogaea HOM05D005645 ORTHO05D007156 2.9e-60 236.5 332 41.3
arahy.Tifrunner.gnm1.ann1.G1675E Arachis hypogaea HOM05D005645 ORTHO05D007156 6.4e-60 235.3 332 41.0
HPP92_018255 Vanilla planifolia HOM05D005645 ORTHO05D007156 3.5e-58 229.6 317 39.4
Haze_04926 Corylus avellana HOM05D005645 ORTHO05D007156 2.3e-57 226.9 223 55.6
Haze_04922 Corylus avellana HOM05D005645 ORTHO05D007156 1.2e-53 214.5 213 54.9
AagrBONN_evm.TU.Sc2ySwM_117.1647 Anthoceros agrestis HOM05D005645 ORTHO05D007156 3.8e-52 209.5 416 34.6
CDE05G1077 Ceratophyllum demersum HOM05D005645 ORTHO05D007156 5.3e-46 189.1 170 56.5
MD05G1102300 Malus domestica HOM05D005645 ORTHO05D007156 2.9e-44 183.3 98 80.6
unitig_0.g662 Utricularia gibba HOM05D005645 ORTHO05D007156 6.0e-34 149.1 190 44.7
MD05G1102200 Malus domestica HOM05D005645 ORTHO05D007156 2.4e-30 137.1 116 56.9
TWI59G0946 Tripterygium wilfordii HOM05D005645 ORTHO05D007156 6.1e-26 122.5 163 44.2
Oeu046686.1 Olea europaea HOM05D005645 ORTHO05D007156 2.6e-21 107.1 252 29.0
SMO356G0542 Selaginella moellendorffii HOM05D002394 ORTHO05D002508 3.9e-09 66.6 121 32.2
FAN15G0862 Fragaria x ananassa HOM05D005645 ORTHO05D046604 6.7e-09 65.9 66 54.5
FAN07G2129 Fragaria x ananassa HOM05D005645 ORTHO05D046604 4.4e-08 63.2 78 44.9
DCAR_025410 Daucus carota HOM05D002394 ORTHO05D002508 1.3e-07 61.6 124 33.1
Duzib187G0279 Durio zibethinus HOM05D002394 ORTHO05D002508 4.1e-06 56.6 126 34.1
TWI34G1813 Tripterygium wilfordii HOM05D002394 ORTHO05D002508 4.1e-06 56.6 126 34.9
CDE10G0416 Ceratophyllum demersum HOM05D002394 ORTHO05D002508 9.1e-06 55.5 125 31.2


User provided reference genes

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