Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014743 Sechium edule HOM05D003184 ORTHO05D000394 1.9e-84 315.8 168 100.0
ClCG06G018210 Citrullus lanatus HOM05D003184 ORTHO05D000394 1.6e-22 110.2 111 63.1
MELO3C026176.2 Cucumis melo HOM05D003184 ORTHO05D000394 3.4e-20 102.4 96 64.6
Gohir.A11G037800 Gossypium hirsutum HOM05D003184 ORTHO05D000394 4.9e-19 98.6 111 55.9
Gohir.D11G041000 Gossypium hirsutum HOM05D003184 ORTHO05D000394 4.9e-19 98.6 111 55.9
Gorai.007G044200 Gossypium raimondii HOM05D003184 ORTHO05D000394 4.9e-19 98.6 111 55.9
Thecc.03G137300 Theobroma cacao HOM05D003184 ORTHO05D000394 1.1e-18 97.4 111 53.2
CsaV3_1G000220 Cucumis sativus L. HOM05D003184 ORTHO05D000394 2.4e-18 96.3 99 66.7
Haze_07123 Corylus avellana HOM05D003184 ORTHO05D000394 1.0e-16 90.9 91 59.3
Oeu030646.1 Olea europaea HOM05D003184 ORTHO05D000394 1.7e-16 90.1 92 59.8
Duzib084G1317 Durio zibethinus HOM05D003184 ORTHO05D000394 1.5e-15 87.0 110 47.3
Dinv23196 Davidia involucrata HOM05D003184 ORTHO05D000394 3.3e-15 85.9 106 52.8
Ciclev10032880m.g Citrus clementina HOM05D003184 ORTHO05D000394 5.6e-15 85.1 107 51.4
Cfa003173 Carpinus fangiana HOM05D003184 ORTHO05D000394 9.5e-15 84.3 91 57.1
MSTRG.22885 Avicennia marina HOM05D003184 ORTHO05D000394 2.8e-14 82.8 92 53.3
Cfa018731 Carpinus fangiana HOM05D003184 ORTHO05D000394 3.6e-14 82.4 91 57.1
Dinv11214 Davidia involucrata HOM05D003184 ORTHO05D000394 3.6e-14 82.4 92 56.5
PGSC0003DMG400026945 Solanum tuberosum HOM05D003184 ORTHO05D000394 6.1e-14 81.6 92 55.4
TWI14G0265 Tripterygium wilfordii HOM05D003184 ORTHO05D000394 6.1e-14 81.6 87 56.3
Solyc06g072530.3 Solanum lycopersicum HOM05D003184 ORTHO05D000394 8.0e-14 81.3 92 54.3
Sopen06g028900 Solanum pennellii HOM05D003184 ORTHO05D000394 8.0e-14 81.3 92 54.3
SGA_v2.0_scaffold40G15593 Striga asiatica HOM05D003184 ORTHO05D000394 8.0e-14 81.3 96 52.1
Gorai.006G272700 Gossypium raimondii HOM05D003184 ORTHO05D000394 1.4e-13 80.5 120 44.2
COL.COLO4_16682 Corchorus olitorius HOM05D003184 ORTHO05D000394 1.8e-13 80.1 110 43.6
QL10p001098 Quercus lobata HOM05D003184 ORTHO05D000394 1.8e-13 80.1 110 46.4
PGR142G2053 Punica granatum HOM05D003184 ORTHO05D000394 2.3e-13 79.7 97 50.5
SalBow1G6178 Salvia bowleyana HOM05D003184 ORTHO05D000394 2.3e-13 79.7 87 54.0
EL10Ac5g11337 Beta vulgaris HOM05D003184 ORTHO05D000394 4.0e-13 79.0 87 54.0
MD06G1133900 Malus domestica HOM05D003184 ORTHO05D000394 4.0e-13 79.0 94 54.3
Solyc06g072550.3 Solanum lycopersicum HOM05D003184 ORTHO05D000394 5.2e-13 78.6 92 54.3
Sopen06g028910 Solanum pennellii HOM05D003184 ORTHO05D000394 5.2e-13 78.6 92 54.3
PGSC0003DMG400026944 Solanum tuberosum HOM05D003184 ORTHO05D000394 5.2e-13 78.6 92 54.3
CiPaw.11G002400 Carya illinoinensis HOM05D003184 ORTHO05D000394 8.9e-13 77.8 91 54.9
Gohir.D09G248400 Gossypium hirsutum HOM05D003184 ORTHO05D000394 8.9e-13 77.8 120 43.3
TWI23G0846 Tripterygium wilfordii HOM05D003184 ORTHO05D000394 1.2e-12 77.4 87 52.9
MD14G1150200 Malus domestica HOM05D003184 ORTHO05D000394 1.5e-12 77.0 94 51.1
FAN04G2802 Fragaria x ananassa HOM05D003184 ORTHO05D000394 2.0e-12 76.6 96 54.2
FAN13G0038 Fragaria x ananassa HOM05D003184 ORTHO05D000394 2.0e-12 76.6 97 52.6
RcHm_v2.0_Chr7g0189121 Rosa chinensis HOM05D003184 ORTHO05D000394 2.0e-12 76.6 97 52.6
Nitab4.5_0017715g0010 Nicotiana tabacum HOM05D003184 ORTHO05D000394 3.4e-12 75.9 89 53.9
TAR622G0113 Trochodendron aralioides HOM05D003184 ORTHO05D000394 4.4e-12 75.5 120 44.2
Prupe.5G144900 Prunus persica HOM05D003184 ORTHO05D000394 5.7e-12 75.1 91 50.5
Dinv33298 Davidia involucrata HOM05D003184 ORTHO05D000394 7.5e-12 74.7 96 47.9
Cc04_g09480 Coffea canephora HOM05D003184 ORTHO05D000394 9.8e-12 74.3 94 51.1
FAN08G1332 Fragaria x ananassa HOM05D003184 ORTHO05D000394 9.8e-12 74.3 97 52.6
Sc10g0010710 Simmondsia chinensis HOM05D003184 ORTHO05D000394 9.8e-12 74.3 85 49.4
Sc10g0010800 Simmondsia chinensis HOM05D003184 ORTHO05D000394 9.8e-12 74.3 85 49.4
FvH4_5g09090 Fragaria vesca HOM05D003184 ORTHO05D000394 1.3e-11 73.9 97 52.6
FAN18G2274 Fragaria x ananassa HOM05D003184 ORTHO05D000394 1.3e-11 73.9 97 52.6
Nitab4.5_0000854g0010 Nicotiana tabacum HOM05D003184 ORTHO05D000394 1.7e-11 73.6 92 53.3
Hma1.2p1_0421F.1_g150040 Hydrangea macrophylla HOM05D003184 ORTHO05D000394 2.9e-11 72.8 94 46.8
Lj5A91T55 Lonicera japonica HOM05D003184 ORTHO05D000394 2.9e-11 72.8 88 52.3
Migut.O00352 Erythranthe guttata HOM05D003184 ORTHO05D000394 3.7e-11 72.4 96 49.0
HanXRQChr16g0498791 Helianthus annuus HOM05D003184 ORTHO05D000394 4.9e-11 72.0 92 48.9
Nitab4.5_0000033g0210 Nicotiana tabacum HOM05D003184 ORTHO05D000394 6.4e-11 71.6 92 51.1
Peaxi162Scf00171g01125 Petunia axillaris HOM05D003184 ORTHO05D000394 1.1e-10 70.9 92 48.9
ATR0582G016 Amborella trichopoda HOM05D000748 ORTHO05D000394 1.4e-10 70.5 113 38.9
Peaxi162Scf01064g00114 Petunia axillaris HOM05D003184 ORTHO05D000394 1.4e-10 70.5 92 51.1
Rhsim10G0002700 Rhododendron simsii HOM05D003184 ORTHO05D000394 1.4e-10 70.5 89 51.7
Actinidia08895 Actinidia chinensis HOM05D003184 ORTHO05D000394 1.8e-10 70.1 106 46.2
CiPaw.04G002500 Carya illinoinensis HOM05D003184 ORTHO05D000394 2.4e-10 69.7 112 41.1
Dinv25627 Davidia involucrata HOM05D003184 ORTHO05D000394 2.4e-10 69.7 104 44.2
Manes.14G046800 Manihot esculenta HOM05D003184 ORTHO05D000394 2.4e-10 69.7 97 49.5
GSVIVG01008618001 Vitis vinifera HOM05D003184 ORTHO05D000394 2.4e-10 69.7 105 45.7
Migut.D01302 Erythranthe guttata HOM05D003184 ORTHO05D000394 3.2e-10 69.3 101 44.6
Sc07g0003650 Simmondsia chinensis HOM05D003184 ORTHO05D000394 3.2e-10 69.3 90 45.6
TAR374G1504 Trochodendron aralioides HOM05D003184 ORTHO05D000394 3.2e-10 69.3 119 42.0
Oeu045571.1 Olea europaea HOM05D003184 ORTHO05D000394 4.1e-10 68.9 104 44.2
Peaxi162Scf01064g00117 Petunia axillaris HOM05D003184 ORTHO05D000394 4.1e-10 68.9 89 51.7
HanXRQChr09g0273611 Helianthus annuus HOM05D003184 ORTHO05D000394 5.4e-10 68.6 92 45.7
SalBow5G4450 Salvia bowleyana HOM05D003184 ORTHO05D000394 5.4e-10 68.6 91 47.3
Actinidia18321 Actinidia chinensis HOM05D003184 ORTHO05D000394 7.0e-10 68.2 140 42.9
Haze_14924 Corylus avellana HOM05D003184 ORTHO05D000394 7.0e-10 68.2 98 41.8
Cpa.g.sc70.94 Carica papaya HOM05D003184 ORTHO05D000394 1.2e-09 67.4 137 35.8
Lj9A484T61 Lonicera japonica HOM05D003184 ORTHO05D000394 1.2e-09 67.4 111 38.7
Manes.06G124500 Manihot esculenta HOM05D003184 ORTHO05D000394 1.2e-09 67.4 91 49.5
Cpa.g.sc4.123 Carica papaya HOM05D003184 ORTHO05D000394 1.6e-09 67.0 76 52.6
FAN05G1263 Fragaria x ananassa HOM05D003184 ORTHO05D000394 1.6e-09 67.0 95 46.3
PGR083G0980 Punica granatum HOM05D003184 ORTHO05D000394 1.6e-09 67.0 90 44.4
Actinidia23302 Actinidia chinensis HOM05D003184 ORTHO05D000394 2.0e-09 66.6 86 46.5
ECA232G0468 Erigeron canadensis HOM05D003184 ORTHO05D000394 2.0e-09 66.6 98 42.9
Sc22g0003570 Simmondsia chinensis HOM05D003184 ORTHO05D000394 2.7e-09 66.2 86 46.5
SHI14135 Sapria himalayana HOM05D003184 ORTHO05D000394 3.5e-09 65.9 89 46.1
GSVIVG01033020001 Vitis vinifera HOM05D003184 ORTHO05D000394 4.6e-09 65.5 75 45.3
Peaxi162Scf01064g00115 Petunia axillaris HOM05D003184 ORTHO05D000394 7.8e-09 64.7 92 46.7
QL02p070196 Quercus lobata HOM05D003184 ORTHO05D000394 7.8e-09 64.7 98 42.9
Nitab4.5_0001825g0030 Nicotiana tabacum HOM05D003184 ORTHO05D000394 1.0e-08 64.3 92 45.7
Potri.012G104300 Populus trichocarpa HOM05D003184 ORTHO05D000394 1.0e-08 64.3 106 38.7
Sabra15G0123100 Salix brachista HOM05D003184 ORTHO05D000394 1.0e-08 64.3 162 35.8
SGA_v2.0_scaffold44G16941 Striga asiatica HOM05D003184 ORTHO05D000394 1.0e-08 64.3 109 35.8
FvH4_6g54070 Fragaria vesca HOM05D003184 ORTHO05D000394 1.3e-08 63.9 95 46.3
FAN02G3218 Fragaria x ananassa HOM05D003184 ORTHO05D000394 1.3e-08 63.9 95 46.3
FAN02G3850 Fragaria x ananassa HOM05D003184 ORTHO05D000394 1.3e-08 63.9 95 46.3
Nitab4.5_0001451g0040 Nicotiana tabacum HOM05D003184 ORTHO05D000394 1.3e-08 63.9 92 44.6
Prupe.3G311300 Prunus persica HOM05D003184 ORTHO05D000394 1.3e-08 63.9 73 53.4
Actinidia36831 Actinidia chinensis HOM05D003184 ORTHO05D000394 1.7e-08 63.5 150 36.0
ATR0582G135 Amborella trichopoda HOM05D000748 ORTHO05D000394 1.7e-08 63.5 144 34.0
ATR0582G194 Amborella trichopoda HOM05D003184 ORTHO05D000394 1.7e-08 63.5 95 38.9
Eucgr.I01612 Eucalyptus grandis HOM05D003184 ORTHO05D000394 1.7e-08 63.5 98 43.9
Rhsim12G0178600 Rhododendron simsii HOM05D003184 ORTHO05D000394 1.7e-08 63.5 106 43.4
CSS0031765 Camellia sinensis var. sinensis HOM05D003184 ORTHO05D000394 2.3e-08 63.2 101 45.5
Manes.04G090520 Manihot esculenta HOM05D003184 ORTHO05D000394 2.3e-08 63.2 97 38.1
MD09G1005700 Malus domestica HOM05D003184 ORTHO05D000394 3.0e-08 62.8 99 43.4
Rhsim08G0194800 Rhododendron simsii HOM05D003184 ORTHO05D000394 3.0e-08 62.8 139 35.3
ATR0582G013 Amborella trichopoda HOM05D003184 ORTHO05D000394 5.0e-08 62.0 91 45.1
Potri.015G103600 Populus trichocarpa HOM05D003184 ORTHO05D000394 6.6e-08 61.6 91 46.2
Sabra12G0076700 Salix brachista HOM05D003184 ORTHO05D000394 6.6e-08 61.6 116 37.9
Actinidia25537 Actinidia chinensis HOM05D003184 ORTHO05D000394 8.6e-08 61.2 102 48.0
Gohir.A09G247650 Gossypium hirsutum HOM05D003184 ORTHO05D000394 8.6e-08 61.2 82 48.8
Lsat_1_v5_gn_4_82801 Lactuca sativa HOM05D003184 ORTHO05D000394 8.6e-08 61.2 92 45.7
MSTRG.4625 Avicennia marina HOM05D003184 ORTHO05D000394 1.5e-07 60.5 101 43.6
RcHm_v2.0_Chr2g0176261 Rosa chinensis HOM05D003184 ORTHO05D000394 1.5e-07 60.5 94 42.6
arahy.Tifrunner.gnm1.ann1.BTBE2F Arachis hypogaea HOM05D003184 ORTHO05D000394 1.9e-07 60.1 91 40.7
CSS0009721 Camellia sinensis var. sinensis HOM05D003184 ORTHO05D000394 1.9e-07 60.1 98 40.8
Duzib068G0614 Durio zibethinus HOM05D003184 ORTHO05D000394 1.9e-07 60.1 110 37.3
vmacro19159 Vaccinium macrocarpon HOM05D003184 ORTHO05D000394 1.9e-07 60.1 106 36.8
PGSC0003DMG400012025 Solanum tuberosum HOM05D003184 ORTHO05D000394 2.5e-07 59.7 97 40.2
arahy.Tifrunner.gnm1.ann1.A2ENIY Arachis hypogaea HOM05D003184 ORTHO05D000394 3.3e-07 59.3 91 39.6
Duzib187G1178 Durio zibethinus HOM05D003184 ORTHO05D000394 5.6e-07 58.5 89 38.2
CSS0007105 Camellia sinensis var. sinensis HOM05D003184 ORTHO05D000394 7.3e-07 58.2 89 43.8
CiPaw.10G048100 Carya illinoinensis HOM05D000748 ORTHO05D000394 9.5e-07 57.8 79 43.0
Nn4g22197 Nelumbo nucifera HOM05D003184 ORTHO05D000394 9.5e-07 57.8 92 41.3
Sabra16G0206400 Salix brachista HOM05D003184 ORTHO05D000394 9.5e-07 57.8 89 40.4
Nn3g16336 Nelumbo nucifera HOM05D003184 ORTHO05D000394 1.2e-06 57.4 93 40.9
EL10Ac6g13375 Beta vulgaris HOM05D003184 ORTHO05D000394 1.6e-06 57.0 90 36.7
CDE01G0830 Ceratophyllum demersum HOM05D003184 ORTHO05D000394 1.6e-06 57.0 87 40.2
Nitab4.5_0001825g0040 Nicotiana tabacum HOM05D003184 ORTHO05D000394 1.6e-06 57.0 91 46.2
Gohir.D07G238300 Gossypium hirsutum HOM05D003184 ORTHO05D000394 2.1e-06 56.6 90 40.0
Migut.M01144 Erythranthe guttata HOM05D000748 ORTHO05D000394 2.8e-06 56.2 80 40.0
Gorai.001G274100 Gossypium raimondii HOM05D003184 ORTHO05D000394 2.8e-06 56.2 90 40.0
Gohir.A05G161800 Gossypium hirsutum HOM05D000748 ORTHO05D000394 3.6e-06 55.8 87 40.2
Nitab4.5_0001451g0020 Nicotiana tabacum HOM05D003184 ORTHO05D000394 3.6e-06 55.8 125 39.2
Nitab4.5_0002773g0040 Nicotiana tabacum HOM05D003184 ORTHO05D000394 3.6e-06 55.8 93 45.2
PSO478G2339 Papaver somniferum HOM05D003184 ORTHO05D000394 6.2e-06 55.1 75 42.7
Solyc03g097720.4 Solanum lycopersicum HOM05D003184 ORTHO05D000394 6.2e-06 55.1 97 37.1
Migut.F00025 Erythranthe guttata HOM05D003184 ORTHO05D000394 8.0e-06 54.7 99 35.4
PSO017G3715 Papaver somniferum HOM05D003184 ORTHO05D000394 8.0e-06 54.7 75 42.7
SalBow8G4396 Salvia bowleyana HOM05D003185 ORTHO05D009915 8.0e-06 54.7 84 32.1


User provided reference genes

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