Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014638 Sechium edule HOM05D005726 ORTHO05D001733 1.8e-66 255.8 126 100.0
Sed0019554 Sechium edule HOM05D005726 ORTHO05D001733 1.4e-55 219.5 126 84.9
ClCG02G011420 Citrullus lanatus HOM05D005726 ORTHO05D001733 7.5e-49 197.2 127 78.7
MELO3C020779.2 Cucumis melo HOM05D005726 ORTHO05D001733 1.7e-37 159.5 129 70.5
CsaV3_2G015680 Cucumis sativus L. HOM05D005726 ORTHO05D001733 4.7e-35 151.4 129 68.2
Duzib132G0889 Durio zibethinus HOM05D005726 ORTHO05D001733 2.6e-33 145.6 126 57.9
COL.COLO4_17253 Corchorus olitorius HOM05D005726 ORTHO05D001733 3.4e-33 145.2 128 57.0
Gohir.A12G039400 Gossypium hirsutum HOM05D005726 ORTHO05D001733 4.4e-33 144.8 126 57.1
Haze_02200 Corylus avellana HOM05D005726 ORTHO05D001733 2.9e-32 142.1 126 56.3
Atru.chr5.3224 Acer truncatum HOM05D005726 ORTHO05D001733 3.7e-32 141.7 126 55.6
RcHm_v2.0_Chr6g0245271 Rosa chinensis HOM05D005726 ORTHO05D001733 3.7e-32 141.7 130 56.9
Gohir.D12G033000 Gossypium hirsutum HOM05D005726 ORTHO05D001733 8.4e-32 140.6 125 57.6
Gorai.008G033800 Gossypium raimondii HOM05D005726 ORTHO05D001733 8.4e-32 140.6 125 57.6
Cfa005182 Carpinus fangiana HOM05D005726 ORTHO05D001733 1.1e-31 140.2 126 56.3
Cpa.g.sc37.193 Carica papaya HOM05D005726 ORTHO05D001733 4.1e-31 138.3 125 54.4
Ciclev10029543m.g Citrus clementina HOM05D005726 ORTHO05D001733 2.1e-30 136.0 132 53.0
Potri.004G167800 Populus trichocarpa HOM05D005726 ORTHO05D001733 3.5e-30 135.2 127 55.1
CiPaw.05G077000 Carya illinoinensis HOM05D005726 ORTHO05D001733 4.6e-30 134.8 126 57.1
Ciclev10029854m.g Citrus clementina HOM05D005726 ORTHO05D001733 6.0e-30 134.4 132 52.3
Potri.009G129301 Populus trichocarpa HOM05D005726 ORTHO05D001733 1.0e-29 133.7 127 54.3
QL11p047517 Quercus lobata HOM05D005726 ORTHO05D001733 2.3e-29 132.5 124 57.3
MD10G1118100 Malus domestica HOM05D005726 ORTHO05D001733 5.6e-28 127.9 132 50.0
Thecc.02G067200 Theobroma cacao HOM05D005726 ORTHO05D001733 9.6e-28 127.1 126 52.4
FAN04G1699 Fragaria x ananassa HOM05D005726 ORTHO05D001733 1.4e-26 123.2 118 55.1
Nn1g05896 Nelumbo nucifera HOM05D005726 ORTHO05D001733 1.4e-26 123.2 128 46.9
Nn5g30142 Nelumbo nucifera HOM05D005726 ORTHO05D001733 1.4e-26 123.2 126 48.4
MD05G1115600 Malus domestica HOM05D005726 ORTHO05D001733 3.1e-26 122.1 134 47.0
Actinidia00594 Actinidia chinensis HOM05D005726 ORTHO05D001733 4.0e-26 121.7 115 53.0
Prupe.8G160400 Prunus persica HOM05D005726 ORTHO05D001733 1.2e-25 120.2 135 52.6
Manes.04G078400 Manihot esculenta HOM05D005726 ORTHO05D001733 5.8e-25 117.9 129 48.8
MBI05_g33718_MAGBIO Magnolia biondii HOM05D005726 ORTHO05D001733 7.6e-25 117.5 126 46.0
Sabra09G0098800 Salix brachista HOM05D005726 ORTHO05D001733 2.2e-24 115.9 111 53.2
DCAR_003698 Daucus carota HOM05D005726 ORTHO05D001733 2.9e-24 115.5 129 48.1
TAR376G0138 Trochodendron aralioides HOM05D005726 ORTHO05D001733 8.4e-24 114.0 118 47.5
TAR625G1501 Trochodendron aralioides HOM05D005726 ORTHO05D001733 5.4e-23 111.3 126 46.0
PSO170G6562 Papaver somniferum HOM05D005726 ORTHO05D001733 9.3e-23 110.5 141 43.3
MBI05_g46327_MAGBIO Magnolia biondii HOM05D005726 ORTHO05D001733 1.3e-21 106.7 117 46.2
QL02p011637 Quercus lobata HOM05D005726 ORTHO05D001733 5.6e-20 101.3 126 42.9
PGR042G3858 Punica granatum HOM05D005726 ORTHO05D001733 3.6e-19 98.6 143 42.7
Sed0021833 Sechium edule HOM05D005726 ORTHO05D001733 4.8e-19 98.2 133 40.6
Migut.N01283 Erythranthe guttata HOM05D005726 ORTHO05D001733 8.1e-19 97.4 132 39.4
Medtr3g117720 Medicago truncatula HOM05D005726 ORTHO05D001733 8.1e-19 97.4 85 52.9
TPR.G38487 Trifolium pratense HOM05D005726 ORTHO05D001733 2.4e-18 95.9 84 52.4
Cfa013952 Carpinus fangiana HOM05D005726 ORTHO05D001733 9.0e-18 94.0 129 38.8
CiPaw.07G149600 Carya illinoinensis HOM05D005726 ORTHO05D001733 1.2e-17 93.6 126 38.1
Haze_22635 Corylus avellana HOM05D005726 ORTHO05D001733 1.2e-17 93.6 129 38.8
Cc02_g16550 Coffea canephora HOM05D005726 ORTHO05D001733 3.8e-16 88.6 119 42.9
Atru.chr13.290 Acer truncatum HOM05D005726 ORTHO05D001733 8.4e-16 87.4 121 38.8
Manes.05G147300 Manihot esculenta HOM05D005726 ORTHO05D001733 1.9e-15 86.3 125 42.4
Potri.002G022100 Populus trichocarpa HOM05D005726 ORTHO05D001733 2.4e-15 85.9 126 38.9
THA.LOC104821582 Tarenaya hassleriana HOM05D005726 ORTHO05D001733 5.4e-15 84.7 138 37.7
Phvul.009G017000 Phaseolus vulgaris HOM05D005726 ORTHO05D001733 1.6e-14 83.2 135 38.5
Glyma.04G005451 Glycine max HOM05D005726 ORTHO05D001733 2.7e-14 82.4 91 51.6
CsaV3_2G029540 Cucumis sativus L. HOM05D005726 ORTHO05D001733 3.5e-14 82.0 130 35.4
Eucgr.F00586 Eucalyptus grandis HOM05D005726 ORTHO05D001733 4.6e-14 81.6 123 38.2
ClCG05G018250 Citrullus lanatus HOM05D005726 ORTHO05D001733 6.0e-14 81.3 126 37.3
Lalb_Chr11g0061921 Lupinus albus HOM05D005726 ORTHO05D001733 7.9e-14 80.9 134 36.6
TWI56G0219 Tripterygium wilfordii HOM05D005726 ORTHO05D001733 1.0e-13 80.5 124 36.3
MD08G1013100 Malus domestica HOM05D005726 ORTHO05D001733 1.3e-13 80.1 127 37.8
BcaB07g31777 Brassica carinata HOM05D005726 ORTHO05D001733 2.3e-13 79.3 130 35.4
Carub.0008s0720 Capsella rubella HOM05D005726 ORTHO05D001733 2.3e-13 79.3 130 35.4
PGR031G2508 Punica granatum HOM05D005726 ORTHO05D001733 2.3e-13 79.3 129 38.0
RcHm_v2.0_Chr6g0302871 Rosa chinensis HOM05D005726 ORTHO05D001733 2.3e-13 79.3 111 36.9
Sopen04g035070 Solanum pennellii HOM05D005726 ORTHO05D001733 3.0e-13 79.0 132 37.1
Thecc.08G044700 Theobroma cacao HOM05D005726 ORTHO05D001733 3.9e-13 78.6 120 34.2
BolC9t54179H Brassica oleracea HOM05D005726 ORTHO05D001733 5.1e-13 78.2 130 34.6
Ciclev10003161m.g Citrus clementina HOM05D005726 ORTHO05D001733 5.1e-13 78.2 119 39.5
CsaV3_3G045890 Cucumis sativus L. HOM05D005726 ORTHO05D001733 5.1e-13 78.2 126 35.7
PGSC0003DMG400009937 Solanum tuberosum HOM05D005726 ORTHO05D001733 5.1e-13 78.2 132 37.1
BcaC04g23031 Brassica carinata HOM05D005726 ORTHO05D001733 8.7e-13 77.4 130 34.6
C09p12890 Brassica napus HOM05D005726 ORTHO05D001733 8.7e-13 77.4 130 34.6
AT5G42146 Arabidopsis thaliana HOM05D005726 ORTHO05D001733 2.5e-12 75.9 130 33.8
CARHR284740 Cardamine hirsuta HOM05D005726 ORTHO05D001733 3.3e-12 75.5 130 33.8
Sed0014046 Sechium edule HOM05D005726 ORTHO05D001733 3.3e-12 75.5 116 38.8
Phvul.009G000100 Phaseolus vulgaris HOM05D005726 ORTHO05D001733 5.6e-12 74.7 79 55.7
MELO3C003749.2 Cucumis melo HOM05D005726 ORTHO05D001733 7.4e-12 74.3 126 34.1
Gohir.A06G004000 Gossypium hirsutum HOM05D005726 ORTHO05D001733 7.4e-12 74.3 126 33.3
Gorai.010G004200 Gossypium raimondii HOM05D005726 ORTHO05D001733 9.6e-12 73.9 126 33.3
MBI05_g46324_MAGBIO Magnolia biondii HOM05D005726 ORTHO05D001733 9.6e-12 73.9 124 33.1
VMungo1309G2498 Vigna mungo HOM05D005726 ORTHO05D001733 9.6e-12 73.9 135 35.6
Oeu037538.1 Olea europaea HOM05D005726 ORTHO05D001733 1.6e-11 73.2 127 33.1
Gohir.D06G006900 Gossypium hirsutum HOM05D005726 ORTHO05D001733 2.1e-11 72.8 126 32.5
Nitab4.5_0002561g0020 Nicotiana tabacum HOM05D005726 ORTHO05D001733 2.8e-11 72.4 128 33.6
Glyma.04G024200 Glycine max HOM05D005726 ORTHO05D001733 3.6e-11 72.0 135 36.3
FvH4_5g34311 Fragaria vesca HOM05D005726 ORTHO05D001733 8.1e-11 70.9 50 62.0
Cfa005180 Carpinus fangiana HOM05D005726 ORTHO05D001733 2.4e-10 69.3 100 45.0
Oeu027542.1 Olea europaea HOM05D005726 ORTHO05D001733 4.0e-10 68.6 125 32.0
ATR0810G150 Amborella trichopoda HOM05D005726 ORTHO05D001733 9.0e-10 67.4 126 31.0
Lsat_1_v5_gn_2_9581 Lactuca sativa HOM05D005726 ORTHO05D001733 2.6e-09 65.9 111 35.1
CANSAT01G1229 Cannabis sativa HOM05D005726 ORTHO05D001733 3.4e-09 65.5 138 26.8
Cpa.g.sc26.44 Carica papaya HOM05D005726 ORTHO05D001733 3.4e-09 65.5 122 36.1
Glyma.12G024300 Glycine max HOM05D005726 ORTHO05D001733 9.9e-09 63.9 103 37.9
Migut.C00838 Erythranthe guttata HOM05D005726 ORTHO05D001733 2.2e-08 62.8 118 31.4
EL10Ac1g02194 Beta vulgaris HOM05D005726 ORTHO05D001733 3.8e-08 62.0 119 31.1
Prupe.1G365100 Prunus persica HOM05D005726 ORTHO05D001733 4.9e-08 61.6 127 30.7
Ah.11g039720 Amaranthus hybridus HOM05D005726 ORTHO05D001733 6.4e-08 61.2 113 33.6
Lsat_1_v5_gn_8_125861 Lactuca sativa HOM05D005726 ORTHO05D001733 2.4e-07 59.3 72 40.3
MBI05_g33720_MAGBIO Magnolia biondii HOM05D003064 ORTHO05D001733 3.5e-06 55.5 124 28.2
Lj4g0016221 Lotus japonicus HOM05D018548 ORTHO05D020752 4.6e-06 55.1 122 36.1
Thhalv10015257m.g Eutrema salsugineum HOM05D005726 ORTHO05D001733 7.9e-06 54.3 120 29.2


User provided reference genes

Program Settings