Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014627 Sechium edule HOM05D006517 ORTHO05D007886 2.2e-154 548.9 276 100.0
ClCG03G014700 Citrullus lanatus HOM05D006517 ORTHO05D007886 7.7e-131 470.7 276 86.6
CsaV3_1G041470 Cucumis sativus L. HOM05D006517 ORTHO05D007886 2.9e-130 468.8 276 84.8
MELO3C015558.2 Cucumis melo HOM05D006517 ORTHO05D007886 1.7e-122 443.0 277 82.7
GSVIVG01000273001 Vitis vinifera HOM05D006517 ORTHO05D007886 1.3e-93 347.1 289 61.9
Prupe.7G189300 Prunus persica HOM05D006517 ORTHO05D007886 2.4e-92 342.8 280 62.9
Cfa010680 Carpinus fangiana HOM05D006517 ORTHO05D007886 5.4e-92 341.7 283 62.9
CiPaw.03G198900 Carya illinoinensis HOM05D006517 ORTHO05D007886 1.2e-91 340.5 283 62.9
CSS0016512 Camellia sinensis var. sinensis HOM05D006517 ORTHO05D007886 6.0e-91 338.2 282 62.4
QL11p003516 Quercus lobata HOM05D006517 ORTHO05D007886 6.0e-91 338.2 282 59.9
Atru.chr7.1806 Acer truncatum HOM05D006517 ORTHO05D007886 7.8e-91 337.8 283 62.9
Potri.018G047000 Populus trichocarpa HOM05D006517 ORTHO05D007886 8.6e-90 334.3 283 61.5
Duzib168G1027 Durio zibethinus HOM05D006517 ORTHO05D007886 1.9e-89 333.2 283 61.5
COL.COLO4_21178 Corchorus olitorius HOM05D006517 ORTHO05D007886 4.3e-89 332.0 284 62.3
Gohir.D08G268100 Gossypium hirsutum HOM05D006517 ORTHO05D007886 5.6e-89 331.6 283 59.4
Gorai.004G285800 Gossypium raimondii HOM05D006517 ORTHO05D007886 5.6e-89 331.6 283 59.4
Manes.03G055100 Manihot esculenta HOM05D006517 ORTHO05D007886 9.5e-89 330.9 282 62.4
Duzib150G1397 Durio zibethinus HOM05D006517 ORTHO05D007886 1.2e-88 330.5 283 61.1
RcHm_v2.0_Chr2g0096541 Rosa chinensis HOM05D006517 ORTHO05D007886 1.6e-88 330.1 278 60.1
Lj4g0027818 Lotus japonicus HOM05D006517 ORTHO05D007886 2.8e-88 329.3 283 61.1
Thecc.09G067300 Theobroma cacao HOM05D006517 ORTHO05D007886 6.2e-88 328.2 284 60.9
TAR383G1010 Trochodendron aralioides HOM05D006517 ORTHO05D007886 6.2e-88 328.2 283 60.4
Medtr4g124370 Medicago truncatula HOM05D006517 ORTHO05D007886 5.8e-86 321.6 279 61.6
Eucgr.C00754 Eucalyptus grandis HOM05D006517 ORTHO05D007886 9.9e-86 320.9 279 60.6
Gohir.A08G246900 Gossypium hirsutum HOM05D006517 ORTHO05D007886 9.9e-86 320.9 283 58.7
Phvul.003G125800 Phaseolus vulgaris HOM05D006517 ORTHO05D007886 2.2e-85 319.7 275 61.8
Ca_21351_v3 Cicer arietinum L. HOM05D006517 ORTHO05D007886 2.9e-85 319.3 281 61.2
Dinv42443 Davidia involucrata HOM05D006517 ORTHO05D007886 2.9e-85 319.3 282 60.3
Glyma.13G116000 Glycine max HOM05D006517 ORTHO05D007886 3.8e-85 318.9 278 60.1
Migut.J00866 Erythranthe guttata HOM05D006517 ORTHO05D007886 4.9e-85 318.5 282 58.5
Lalb_Chr13g0299091 Lupinus albus HOM05D006517 ORTHO05D007886 1.1e-84 317.4 281 61.9
THA.LOC104804445 Tarenaya hassleriana HOM05D006517 ORTHO05D007886 1.2e-83 313.9 282 57.8
PGR124G0001 Punica granatum HOM05D006517 ORTHO05D007886 1.1e-81 307.4 281 59.8
PGR142G0057 Punica granatum HOM05D006517 ORTHO05D007886 1.1e-81 307.4 281 59.8
Oeu000272.2 Olea europaea HOM05D006517 ORTHO05D007886 1.2e-80 303.9 282 56.0
Glyma.17G043800 Glycine max HOM05D006517 ORTHO05D007886 1.4e-79 300.4 278 57.6
TPR.G12541 Trifolium pratense HOM05D006517 ORTHO05D007886 1.4e-79 300.4 279 59.9
Nitab4.5_0000987g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 5.2e-79 298.5 283 58.0
FAN23G1398 Fragaria x ananassa HOM05D006517 ORTHO05D007886 2.6e-78 296.2 278 56.1
CDE05G1274 Ceratophyllum demersum HOM05D006517 ORTHO05D007886 4.4e-78 295.4 288 55.2
MD15G1225700 Malus domestica HOM05D006517 ORTHO05D007886 4.4e-78 295.4 289 55.7
CANSAT56G3804 Cannabis sativa HOM05D006517 ORTHO05D007886 9.9e-78 294.3 287 56.4
Lsat_1_v5_gn_8_118080 Lactuca sativa HOM05D006517 ORTHO05D007886 9.9e-78 294.3 279 57.3
Potri.006G217100 Populus trichocarpa HOM05D006517 ORTHO05D007886 1.3e-77 293.9 289 54.3
Sc18g0002960 Simmondsia chinensis HOM05D006517 ORTHO05D007886 2.2e-77 293.1 275 55.6
AUR62025324 Chenopodium quinoa HOM05D006517 ORTHO05D007886 3.8e-77 292.4 284 54.9
EL10Ac8g18944 Beta vulgaris HOM05D006517 ORTHO05D007886 4.2e-76 288.9 277 56.0
unitig_26.g9120 Utricularia gibba HOM05D006517 ORTHO05D007886 1.2e-75 287.3 286 55.6
CANSAT56G0784 Cannabis sativa HOM05D006517 ORTHO05D007886 2.1e-75 286.6 288 55.6
Hund08920 Selenicereus undatus HOM05D006517 ORTHO05D007886 2.7e-75 286.2 272 56.6
HanXRQChr09g0258421 Helianthus annuus HOM05D006517 ORTHO05D007886 6.0e-75 285.0 272 54.8
PSO541G2149 Papaver somniferum HOM05D006517 ORTHO05D007886 6.0e-75 285.0 285 55.4
Ciclev10009053m.g Citrus clementina HOM05D006517 ORTHO05D007886 7.8e-75 284.6 283 53.7
PSO675G5415 Papaver somniferum HOM05D006517 ORTHO05D007886 1.7e-74 283.5 283 55.8
arahy.Tifrunner.gnm1.ann1.2S6U7G Arachis hypogaea HOM05D006517 ORTHO05D007886 2.3e-74 283.1 258 57.4
FvH4_1g09680 Fragaria vesca HOM05D006517 ORTHO05D007886 5.1e-74 282.0 278 54.7
FAN26G1998 Fragaria x ananassa HOM05D006517 ORTHO05D007886 5.1e-74 282.0 278 54.7
SGA_v2.0_scaffold318G48507 Striga asiatica HOM05D006517 ORTHO05D007886 6.6e-74 281.6 288 53.8
CAN.G55.2 Capsicum annuum HOM05D006517 ORTHO05D007886 1.9e-73 280.0 288 54.5
ATR0006G021 Amborella trichopoda HOM05D006517 ORTHO05D007886 1.1e-71 274.2 292 51.0
MBI13_g05966_MAGBIO Magnolia biondii HOM05D006517 ORTHO05D007886 4.0e-71 272.3 281 52.7
ECA232G0292 Erigeron canadensis HOM05D001622 ORTHO05D002989 9.9e-70 267.7 257 59.1
Nitab4.5_0005239g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 1.3e-69 267.3 288 51.7
MD02G1105800 Malus domestica HOM05D006517 ORTHO05D007886 4.9e-69 265.4 289 52.6
Aqoxy7G00916 Aquilegia oxysepala HOM05D006517 ORTHO05D007886 1.1e-68 264.2 286 52.8
Zm00001eb327610 Zea mays HOM05D006517 ORTHO05D007886 4.2e-68 262.3 281 50.2
Sabra06G0167400 Salix brachista HOM05D006517 ORTHO05D007886 9.3e-68 261.2 299 49.2
Duzib187G0844 Durio zibethinus HOM05D006517 ORTHO05D007886 1.6e-67 260.4 283 52.3
VMungo1215G1783 Vigna mungo HOM05D006517 ORTHO05D007886 6.7e-66 255.0 273 52.7
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 9.6e-65 251.1 252 56.0
Psat4g020160 Pisum sativum HOM05D006517 ORTHO05D007886 1.8e-63 246.9 240 56.7
Os07g0618600 Oryza sativa ssp. japonica HOM05D006517 ORTHO05D007886 5.3e-63 245.4 287 48.8
arahy.Tifrunner.gnm1.ann1.0410DC Arachis hypogaea HOM05D006517 ORTHO05D007886 4.5e-62 242.3 231 55.4
AUR62028338 Chenopodium quinoa HOM05D000417 ORTHO05D007886 4.5e-62 242.3 278 50.4
FAN26G3113 Fragaria x ananassa HOM05D006517 ORTHO05D007886 7.6e-62 241.5 278 50.0
Actinidia39601 Actinidia chinensis HOM05D006517 ORTHO05D007886 1.4e-60 237.3 236 55.9
Oeu000950.1 Olea europaea HOM05D006517 ORTHO05D007886 9.3e-60 234.6 243 53.5
Nn8g38504 Nelumbo nucifera HOM05D006517 ORTHO05D007886 2.1e-59 233.4 273 48.7
Actinidia39602 Actinidia chinensis HOM05D006517 ORTHO05D007886 3.5e-59 232.6 237 54.9
SGA_v2.0_scaffold31G12706 Striga asiatica HOM05D006517 ORTHO05D007886 3.0e-58 229.6 243 53.9
SalBow6G1494 Salvia bowleyana HOM05D006517 ORTHO05D007886 2.5e-57 226.5 255 51.4
FAN28G2617 Fragaria x ananassa HOM05D006517 ORTHO05D007886 3.1e-55 219.5 278 47.5
Mapoly0086s0040 Marchantia polymorpha HOM05D006517 ORTHO05D007886 3.1e-55 219.5 286 44.4
SMO117G0175 Selaginella moellendorffii HOM05D006517 ORTHO05D007886 1.3e-53 214.2 300 44.3
DCAR_010521 Daucus carota HOM05D006517 ORTHO05D007886 3.5e-51 206.1 297 45.1
FAN23G2301 Fragaria x ananassa HOM05D006517 ORTHO05D007886 3.5e-51 206.1 278 45.3
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 6.9e-47 191.8 234 49.1
Sp4g06310 Schrenkiella parvula HOM05D006517 ORTHO05D007886 1.9e-44 183.7 191 51.3
BraA04t17607Z Brassica rapa HOM05D006517 ORTHO05D007886 5.1e-42 175.6 182 53.8
A04p20280 Brassica napus HOM05D006517 ORTHO05D007886 1.1e-41 174.5 182 53.8
HPP92_002241 Vanilla planifolia HOM05D000872 ORTHO05D000777 3.3e-41 172.9 227 45.8
C04p55990 Brassica napus HOM05D006517 ORTHO05D007886 4.3e-41 172.6 158 58.9
BolC4t27132H Brassica oleracea HOM05D006517 ORTHO05D007886 4.3e-41 172.6 158 58.9
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 7.4e-41 171.8 201 47.8
Aa31LG5G9580 Aethionema arabicum HOM05D006517 ORTHO05D007886 1.3e-40 171.0 205 47.8
AL4G18760 Arabidopsis lyrata HOM05D006517 ORTHO05D007886 2.8e-40 169.9 195 50.8
Cc09_g04390 Coffea canephora HOM05D006517 ORTHO05D007886 1.1e-39 167.9 142 57.7
CARHR115040 Cardamine hirsuta HOM05D006517 ORTHO05D007886 1.4e-39 167.5 161 55.9
AT2G26210 Arabidopsis thaliana HOM05D006517 ORTHO05D007886 1.8e-39 167.2 195 48.7
Rhsim05G0081000 Rhododendron simsii HOM05D006517 ORTHO05D007886 5.3e-39 165.6 264 42.4
CBR_g36802 Chara braunii HOM05D006517 ORTHO05D007886 6.9e-39 165.2 303 36.6
Sopen06g010170 Solanum pennellii HOM05D006517 ORTHO05D007886 9.1e-39 164.9 145 55.9
Carub.0004s0605 Capsella rubella HOM05D006517 ORTHO05D007886 2.0e-38 163.7 158 57.0
Pp3c18_11010 Physcomitrium patens HOM05D006517 ORTHO05D007886 2.6e-38 163.3 298 35.6
Solyc06g031680.2 Solanum lycopersicum HOM05D006517 ORTHO05D007886 2.9e-37 159.8 176 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2898 Anthoceros agrestis HOM05D006517 ORTHO05D007886 3.0e-34 149.8 226 41.6
BcaNung07167 Brassica carinata HOM05D006517 ORTHO05D007886 3.3e-33 146.4 157 54.1
Cpa.g.sc82.30 Carica papaya HOM05D006517 ORTHO05D007886 3.3e-33 146.4 113 66.4
Cc09_g04380 Coffea canephora HOM05D006517 ORTHO05D007886 2.2e-32 143.7 128 60.9
SEGI_24061 Sequoiadendron giganteum HOM05D006517 ORTHO05D007886 2.2e-32 143.7 186 46.2
Solyc06g031690.4 Solanum lycopersicum HOM05D006517 ORTHO05D007886 1.8e-31 140.6 90 76.7
Cpa.g.sc82.25 Carica papaya HOM05D006517 ORTHO05D007886 5.3e-31 139.0 71 85.9
FAN19G3155 Fragaria x ananassa HOM05D006517 ORTHO05D007886 2.1e-27 127.1 199 42.7
Thhalv10002200m.g Eutrema salsugineum HOM05D006517 ORTHO05D007886 9.1e-23 111.7 222 37.4
vmacro13145 Vaccinium macrocarpon HOM05D006517 ORTHO05D007886 6.3e-16 89.0 209 34.9
Peaxi162Scf00658g00031 Petunia axillaris HOM05D000115 ORTHO05D000464 5.0e-13 79.3 118 48.3
Medtr5g081760 Medicago truncatula HOM05D006517 ORTHO05D007886 6.5e-13 79.0 78 52.6
Medtr4g036440 Medicago truncatula HOM05D006517 ORTHO05D007886 2.5e-12 77.0 75 54.7
Medtr8g098885 Medicago truncatula HOM05D006517 ORTHO05D007886 3.4e-09 66.6 46 63.0
Lsat_1_v5_gn_5_30201 Lactuca sativa HOM05D006517 ORTHO05D007886 6.3e-08 62.4 83 42.2
TWI73G0176 Tripterygium wilfordii HOM05D000088 ORTHO05D003056 7.0e-07 58.9 76 39.5
MELO3C002689.2 Cucumis melo HOM05D000088 ORTHO05D003056 2.7e-06 57.0 70 41.4
ClCG03G007320 Citrullus lanatus HOM05D000088 ORTHO05D003056 5.9e-06 55.8 70 40.0


User provided reference genes

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