Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014620 Sechium edule HOM05D006996 ORTHO05D008961 1.3e-47 192.6 88 100.0
CsaV3_7G003680 Cucumis sativus L. HOM05D006996 ORTHO05D008961 7.8e-45 183.3 88 93.2
MELO3C018811.2 Cucumis melo HOM05D006996 ORTHO05D008961 3.9e-44 181.0 85 94.1
ClCG02G001860 Citrullus lanatus HOM05D006996 ORTHO05D008961 1.5e-43 179.1 88 90.9
CANSAT64G1676 Cannabis sativa HOM05D006996 ORTHO05D008961 5.6e-43 177.2 88 88.6
PGR042G2836 Punica granatum HOM05D006996 ORTHO05D008961 9.6e-43 176.4 88 89.8
Ciclev10017328m.g Citrus clementina HOM05D006996 ORTHO05D008961 1.3e-42 176.0 88 89.8
Cfa014416 Carpinus fangiana HOM05D006996 ORTHO05D008961 1.6e-42 175.6 88 89.8
CiPaw.03G161100 Carya illinoinensis HOM05D006996 ORTHO05D008961 2.1e-42 175.3 88 87.5
Eucgr.A01713 Eucalyptus grandis HOM05D006996 ORTHO05D008961 4.8e-42 174.1 88 88.6
MD09G1069700 Malus domestica HOM05D006996 ORTHO05D008961 2.4e-41 171.8 88 87.5
MD17G1095900 Malus domestica HOM05D006996 ORTHO05D008961 2.4e-41 171.8 88 87.5
Gohir.A02G139400 Gossypium hirsutum HOM05D006996 ORTHO05D008961 3.1e-41 171.4 88 86.4
Gohir.D03G050100 Gossypium hirsutum HOM05D006996 ORTHO05D008961 3.1e-41 171.4 88 86.4
Gorai.003G051600 Gossypium raimondii HOM05D006996 ORTHO05D008961 3.1e-41 171.4 88 86.4
QL08p033312 Quercus lobata HOM05D006996 ORTHO05D008961 4.0e-41 171.0 87 86.2
RcHm_v2.0_Chr2g0159651 Rosa chinensis HOM05D006996 ORTHO05D008961 4.0e-41 171.0 88 87.5
Prupe.3G218000 Prunus persica HOM05D006996 ORTHO05D008961 5.3e-41 170.6 88 86.4
FvH4_6g43320 Fragaria vesca HOM05D006996 ORTHO05D008961 1.2e-40 169.5 88 86.4
FAN14G3455 Fragaria x ananassa HOM05D006996 ORTHO05D008961 1.2e-40 169.5 88 86.4
THA.LOC104800987 Tarenaya hassleriana HOM05D006996 ORTHO05D008961 1.2e-40 169.5 88 89.8
TWI18G0629 Tripterygium wilfordii HOM05D006996 ORTHO05D008961 1.2e-40 169.5 88 86.4
Cc05_g04850 Coffea canephora HOM05D006996 ORTHO05D008961 2.0e-40 168.7 88 88.6
FAN05G4357 Fragaria x ananassa HOM05D006996 ORTHO05D008961 3.4e-40 167.9 88 85.2
GSVIVG01012649001 Vitis vinifera HOM05D006996 ORTHO05D008961 4.5e-40 167.5 85 87.1
CSS0007447 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 5.8e-40 167.2 87 87.4
Dinv39702 Davidia involucrata HOM05D006996 ORTHO05D008961 9.9e-40 166.4 84 88.1
Manes.13G070800 Manihot esculenta HOM05D006996 ORTHO05D008961 1.3e-39 166.0 88 83.0
Dinv05447 Davidia involucrata HOM05D006996 ORTHO05D008961 1.7e-39 165.6 84 88.1
FAN02G2509 Fragaria x ananassa HOM05D006996 ORTHO05D008961 1.7e-39 165.6 88 85.2
Duzib128G0982 Durio zibethinus HOM05D006996 ORTHO05D008961 2.2e-39 165.2 87 82.8
Thecc.05G208500 Theobroma cacao HOM05D006996 ORTHO05D008961 2.2e-39 165.2 82 87.8
Zm00001eb100890 Zea mays HOM05D006996 ORTHO05D008961 2.2e-39 165.2 88 84.1
Zm00001eb209620 Zea mays HOM05D006996 ORTHO05D008961 2.2e-39 165.2 88 84.1
Aa31LG1G19540 Aethionema arabicum HOM05D006996 ORTHO05D008961 2.9e-39 164.9 88 85.2
Carub.0001s0448 Capsella rubella HOM05D006996 ORTHO05D008961 6.4e-39 163.7 88 87.5
Peaxi162Scf00007g00930 Petunia axillaris HOM05D006996 ORTHO05D008961 8.4e-39 163.3 88 85.2
Solyc07g052420.3 Solanum lycopersicum HOM05D006996 ORTHO05D008961 1.1e-38 162.9 83 88.0
CSS0016840 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 1.4e-38 162.5 86 84.9
Thhalv10009219m.g Eutrema salsugineum HOM05D006996 ORTHO05D008961 1.4e-38 162.5 88 85.2
Sp1g04060 Schrenkiella parvula HOM05D006996 ORTHO05D008961 1.4e-38 162.5 88 85.2
SpUn0024_0080 Schrenkiella parvula HOM05D006996 ORTHO05D008961 1.4e-38 162.5 88 85.2
BcaC07g42146 Brassica carinata HOM05D006996 ORTHO05D008961 1.9e-38 162.2 87 85.1
PGSC0003DMG400025488 Solanum tuberosum HOM05D006996 ORTHO05D008961 1.9e-38 162.2 83 86.7
Potri.018G093501 Populus trichocarpa HOM05D006996 ORTHO05D008961 2.4e-38 161.8 82 85.4
MSTRG.6557 Avicennia marina HOM05D006996 ORTHO05D008961 3.2e-38 161.4 88 86.4
HPP92_011134 Vanilla planifolia HOM05D006996 ORTHO05D008961 3.2e-38 161.4 86 83.7
A10p03740 Brassica napus HOM05D006996 ORTHO05D008961 4.2e-38 161.0 88 84.1
C05p03440 Brassica napus HOM05D006996 ORTHO05D008961 4.2e-38 161.0 88 84.1
C08p51920 Brassica napus HOM05D006996 ORTHO05D008961 4.2e-38 161.0 87 83.9
BolC5t29123H Brassica oleracea HOM05D006996 ORTHO05D008961 4.2e-38 161.0 88 84.1
BolC8t52723H Brassica oleracea HOM05D006996 ORTHO05D008961 4.2e-38 161.0 87 83.9
BraA09t42088Z Brassica rapa HOM05D006996 ORTHO05D008961 4.2e-38 161.0 87 83.9
BraA10t42647Z Brassica rapa HOM05D006996 ORTHO05D008961 4.2e-38 161.0 88 84.1
Oeu027249.1 Olea europaea HOM05D006996 ORTHO05D008961 4.2e-38 161.0 88 85.2
Hund01114 Selenicereus undatus HOM05D006996 ORTHO05D008961 4.2e-38 161.0 85 84.7
Sopen07g026050 Solanum pennellii HOM05D006996 ORTHO05D008961 4.2e-38 161.0 83 85.5
AT1G05205 Arabidopsis thaliana HOM05D006996 ORTHO05D008961 5.4e-38 160.6 87 85.1
Hma1.2p1_0957F.1_g241430 Hydrangea macrophylla HOM05D006996 ORTHO05D008961 5.4e-38 160.6 83 86.7
Lj1A759T40 Lonicera japonica HOM05D006996 ORTHO05D008961 5.4e-38 160.6 88 83.0
Lj1A760T24 Lonicera japonica HOM05D006996 ORTHO05D008961 5.4e-38 160.6 88 83.0
Nitab4.5_0002137g0190 Nicotiana tabacum HOM05D006996 ORTHO05D008961 5.4e-38 160.6 88 85.2
Sabra18G0080400 Salix brachista HOM05D006996 ORTHO05D008961 7.1e-38 160.2 82 84.1
AL1G14970 Arabidopsis lyrata HOM05D006996 ORTHO05D008961 9.3e-38 159.8 87 83.9
arahy.Tifrunner.gnm1.ann1.7T5QAW Arachis hypogaea HOM05D006996 ORTHO05D008961 1.2e-37 159.5 85 82.4
arahy.Tifrunner.gnm1.ann1.BHY6M8 Arachis hypogaea HOM05D006996 ORTHO05D008961 1.2e-37 159.5 85 82.4
arahy.Tifrunner.gnm1.ann1.MSE8LU Arachis hypogaea HOM05D006996 ORTHO05D008961 1.2e-37 159.5 85 82.4
arahy.Tifrunner.gnm1.ann1.QWF8TS Arachis hypogaea HOM05D006996 ORTHO05D008961 1.2e-37 159.5 85 82.4
Ah.11g047700 Amaranthus hybridus HOM05D006996 ORTHO05D008961 2.1e-37 158.7 83 83.1
Nitab4.5_0007092g0010 Nicotiana tabacum HOM05D006996 ORTHO05D008961 2.1e-37 158.7 88 86.4
PSO541G2316 Papaver somniferum HOM05D006996 ORTHO05D008961 2.7e-37 158.3 84 83.3
PSO675G8615 Papaver somniferum HOM05D006996 ORTHO05D008961 2.7e-37 158.3 84 83.3
CDE05G0144 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 7.9e-37 156.8 86 81.4
ECA248G0348 Erigeron canadensis HOM05D006996 ORTHO05D008961 7.9e-37 156.8 87 78.2
HanXRQChr11g0350381 Helianthus annuus HOM05D006996 ORTHO05D008961 1.3e-36 156.0 88 81.8
TPR.G4182 Trifolium pratense HOM05D006996 ORTHO05D008961 1.3e-36 156.0 90 81.1
Glyma.12G194300 Glycine max HOM05D006996 ORTHO05D008961 1.8e-36 155.6 84 82.1
CDE11G0800 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 2.3e-36 155.2 88 79.5
EL10Ac5g11141 Beta vulgaris HOM05D006996 ORTHO05D008961 3.0e-36 154.8 83 81.9
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 3.9e-36 154.5 83 80.7
CARHR004680 Cardamine hirsuta HOM05D006996 ORTHO05D008961 5.1e-36 154.1 87 81.6
Lsat_1_v5_gn_5_163860 Lactuca sativa HOM05D006996 ORTHO05D008961 5.1e-36 154.1 84 81.0
CAN.G846.6 Capsicum annuum HOM05D006996 ORTHO05D008961 6.7e-36 153.7 83 81.9
Medtr2g088460 Medicago truncatula HOM05D006996 ORTHO05D008961 6.7e-36 153.7 82 82.9
Actinidia30517 Actinidia chinensis HOM05D006996 ORTHO05D008961 8.7e-36 153.3 85 82.4
vmacro09127 Vaccinium macrocarpon HOM05D006996 ORTHO05D008961 8.7e-36 153.3 87 78.2
Phvul.005G114700 Phaseolus vulgaris HOM05D006996 ORTHO05D008961 1.3e-34 149.4 82 79.3
Glyma.13G308300 Glycine max HOM05D006996 ORTHO05D008961 3.7e-34 147.9 84 78.6
Lj3g0015321 Lotus japonicus HOM05D006996 ORTHO05D008961 3.7e-34 147.9 81 81.5
Migut.M00413 Erythranthe guttata HOM05D006996 ORTHO05D008961 1.4e-33 146.0 87 78.2
AUR62021549 Chenopodium quinoa HOM05D006996 ORTHO05D008961 1.8e-33 145.6 87 77.0
Nn2g12174 Nelumbo nucifera HOM05D006996 ORTHO05D008961 3.1e-33 144.8 109 65.1
AUR62000730 Chenopodium quinoa HOM05D006996 ORTHO05D008961 4.0e-33 144.4 87 75.9
unitig_21.g20728 Utricularia gibba HOM05D006996 ORTHO05D008961 9.0e-33 143.3 77 79.2
AUR62008544 Chenopodium quinoa HOM05D006996 ORTHO05D008961 1.9e-30 135.6 87 72.4
SalBow7G3715 Salvia bowleyana HOM05D006996 ORTHO05D008961 1.9e-30 135.6 88 75.0
Lalb_Chr14g0375741 Lupinus albus HOM05D006996 ORTHO05D008961 7.1e-30 133.7 78 74.4
CSS0029979 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 1.2e-29 132.9 68 86.8
DCAR_014473 Daucus carota HOM05D006996 ORTHO05D008961 3.9e-28 127.9 65 89.2
TAR627G0363 Trochodendron aralioides HOM05D006996 ORTHO05D008961 3.3e-27 124.8 61 88.5
Sc12g0002320 Simmondsia chinensis HOM05D006996 ORTHO05D008961 5.6e-27 124.0 61 86.9
Psat5g264240 Pisum sativum HOM05D006996 ORTHO05D008961 3.1e-25 118.2 64 81.2
Lsat_1_v5_gn_4_184120 Lactuca sativa HOM05D006996 ORTHO05D008961 5.3e-25 117.5 61 78.7
TAR676G0001 Trochodendron aralioides HOM05D006996 ORTHO05D008961 9.3e-22 106.7 52 84.6
COL.COLO4_06384 Corchorus olitorius HOM05D006996 ORTHO05D008961 2.7e-21 105.1 50 88.0
Mapoly0024s0016 Marchantia polymorpha HOM05D006996 ORTHO05D008961 1.6e-18 95.9 64 64.1
SEGI_13346 Sequoiadendron giganteum HOM05D006996 ORTHO05D008961 1.2e-13 79.7 61 57.4
MCO13G082 Micromonas commoda HOM05D006996 ORTHO05D008961 1.6e-13 79.3 58 58.6
FAN09G4817 Fragaria x ananassa HOM05D006996 ORTHO05D008961 5.1e-12 74.3 38 89.5
CSS0002917 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 2.5e-11 72.0 40 82.5
CSS0018135 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 6.3e-10 67.4 40 75.0
BcaB01g06120 Brassica carinata HOM05D006996 ORTHO05D008961 3.1e-09 65.1 42 73.8
TPR.G35081 Trifolium pratense HOM05D006996 ORTHO05D048925 2.2e-07 58.9 41 68.3


User provided reference genes

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