Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014571 Sechium edule HOM05D003790 ORTHO05D004481 5.7e-81 304.3 164 100.0
ClCG09G005270 Citrullus lanatus HOM05D003790 ORTHO05D004481 1.8e-55 219.5 169 75.1
Sed0026960 Sechium edule HOM05D003790 ORTHO05D004481 2.7e-54 215.7 163 71.2
MELO3C015941.2 Cucumis melo HOM05D003790 ORTHO05D004481 5.5e-52 208.0 180 70.6
CsaV3_7G029800 Cucumis sativus L. HOM05D003790 ORTHO05D004481 7.2e-52 207.6 191 58.1
Manes.01G225600 Manihot esculenta HOM05D003790 ORTHO05D004481 2.7e-46 189.1 165 62.4
Duzib138G1652 Durio zibethinus HOM05D003790 ORTHO05D004481 3.8e-45 185.3 176 54.5
Potri.014G123400 Populus trichocarpa HOM05D003790 ORTHO05D004481 1.0e-42 177.2 175 50.9
Thecc.01G310000 Theobroma cacao HOM05D003790 ORTHO05D004481 1.4e-42 176.8 173 53.8
CiPaw.07G114900 Carya illinoinensis HOM05D003790 ORTHO05D004481 4.0e-42 175.3 182 49.5
CiPaw.08G091700 Carya illinoinensis HOM05D003790 ORTHO05D004481 6.8e-42 174.5 172 52.9
Potri.002G198800 Populus trichocarpa HOM05D003790 ORTHO05D004481 1.5e-41 173.3 175 54.9
Haze_05008 Corylus avellana HOM05D003790 ORTHO05D004481 1.7e-40 169.9 167 55.7
Sabra14G0091700 Salix brachista HOM05D003790 ORTHO05D004481 1.7e-40 169.9 176 50.0
Duzib133G0291 Durio zibethinus HOM05D003790 ORTHO05D004481 2.2e-40 169.5 170 53.5
Sabra02G0159000 Salix brachista HOM05D003790 ORTHO05D004481 2.4e-39 166.0 190 54.2
VMungo0720G2360 Vigna mungo HOM05D003790 ORTHO05D004481 2.4e-39 166.0 173 52.6
Ca_10301_v3 Cicer arietinum L. HOM05D003790 ORTHO05D004481 4.1e-39 165.2 159 51.6
TWI36G1341 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 3.5e-38 162.2 168 59.5
Actinidia25835 Actinidia chinensis HOM05D003270 ORTHO05D003662 4.6e-38 161.8 161 51.6
Actinidia21012 Actinidia chinensis HOM05D003790 ORTHO05D004481 6.0e-38 161.4 163 50.9
Phvul.007G216200 Phaseolus vulgaris HOM05D003790 ORTHO05D004481 6.0e-38 161.4 177 49.2
Medtr1g087710 Medicago truncatula HOM05D003790 ORTHO05D004481 7.8e-38 161.0 179 49.2
Gohir.D11G116500 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.3e-37 160.2 169 49.7
TAR633G1354 Trochodendron aralioides HOM05D003790 ORTHO05D004481 1.3e-37 160.2 172 48.3
Cfa005842 Carpinus fangiana HOM05D003790 ORTHO05D004481 1.7e-37 159.8 169 51.5
Gohir.D07G131700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.7e-37 159.8 182 48.4
Gorai.007G124700 Gossypium raimondii HOM05D003790 ORTHO05D004481 3.0e-37 159.1 168 49.4
Aqoxy2G02808 Aquilegia oxysepala HOM05D003790 ORTHO05D004481 1.1e-36 157.1 173 45.1
Lalb_Chr02g0146651 Lupinus albus HOM05D003790 ORTHO05D004481 1.1e-36 157.1 173 46.8
Glyma.02G014300 Glycine max HOM05D003790 ORTHO05D004481 1.5e-36 156.8 177 49.2
Gorai.001G143000 Gossypium raimondii HOM05D003790 ORTHO05D004481 1.5e-36 156.8 182 48.9
Gohir.A07G127400 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.9e-36 156.4 182 47.3
PGSC0003DMG400037362 Solanum tuberosum HOM05D003790 ORTHO05D004481 1.9e-36 156.4 169 45.6
PGR119G1194 Punica granatum HOM05D003790 ORTHO05D004481 4.3e-36 155.2 168 49.4
TPR.G7317 Trifolium pratense HOM05D003790 ORTHO05D004481 7.3e-36 154.5 175 45.7
Ciclev10022416m.g Citrus clementina HOM05D003790 ORTHO05D004481 1.2e-35 153.7 185 48.6
Glyma.10G015000 Glycine max HOM05D003790 ORTHO05D004481 1.6e-35 153.3 173 48.0
TAR633G0094 Trochodendron aralioides HOM05D003790 ORTHO05D004481 1.6e-35 153.3 172 45.9
Lj2P1202T13 Lonicera japonica HOM05D003790 ORTHO05D004481 2.8e-35 152.5 169 47.3
PGR119G2441 Punica granatum HOM05D003790 ORTHO05D004481 2.8e-35 152.5 167 47.9
CAN.G69.5 Capsicum annuum HOM05D003790 ORTHO05D004481 3.6e-35 152.1 178 44.9
Eucgr.L02691 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.6e-35 152.1 175 46.9
Nn3g21628 Nelumbo nucifera HOM05D003790 ORTHO05D004481 8.0e-35 151.0 186 41.9
Eucgr.H01068 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.8e-34 149.8 163 48.5
Lalb_Chr06g0166611 Lupinus albus HOM05D003790 ORTHO05D004481 1.8e-34 149.8 166 47.6
Rhsim13G0006400 Rhododendron simsii HOM05D003790 ORTHO05D004481 2.3e-34 149.4 179 41.3
PGSC0003DMG400009002 Solanum tuberosum HOM05D003790 ORTHO05D004481 2.3e-34 149.4 165 46.1
Eucgr.E02370 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.2e-34 148.3 175 45.7
QL12p028945 Quercus lobata HOM05D003790 ORTHO05D004481 5.2e-34 148.3 169 53.3
Nitab4.5_0025993g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 6.8e-34 147.9 184 45.7
Gohir.A11G111300 Gossypium hirsutum HOM05D003790 ORTHO05D004481 8.9e-34 147.5 168 47.0
Nitab4.5_0000116g0070 Nicotiana tabacum HOM05D003790 ORTHO05D004481 2.6e-33 146.0 186 43.5
Oeu005873.1 Olea europaea HOM05D003790 ORTHO05D004481 4.4e-33 145.2 168 45.2
Gohir.A12G126700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 5.8e-33 144.8 167 50.3
Gorai.008G141400 Gossypium raimondii HOM05D003790 ORTHO05D004481 7.5e-33 144.4 170 49.4
CANSAT25G2552 Cannabis sativa HOM05D003790 ORTHO05D004481 9.8e-33 144.1 189 41.3
Cpa.g.sc18.4 Carica papaya HOM05D003790 ORTHO05D004481 9.8e-33 144.1 174 48.9
Peaxi162Scf00001g00262 Petunia axillaris HOM05D003790 ORTHO05D004481 9.8e-33 144.1 190 41.6
THA.LOC104801296 Tarenaya hassleriana HOM05D003790 ORTHO05D004481 9.8e-33 144.1 158 48.7
vmacro02415 Vaccinium macrocarpon HOM05D003790 ORTHO05D004481 1.7e-32 143.3 176 42.0
DCAR_018309 Daucus carota HOM05D003790 ORTHO05D004481 2.2e-32 142.9 174 41.4
Nitab4.5_0017359g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 2.9e-32 142.5 183 43.7
Oeu008329.1 Olea europaea HOM05D003790 ORTHO05D004481 2.9e-32 142.5 162 46.3
TWI75G0985 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 6.4e-32 141.4 155 53.5
Peaxi162Scf00001g00263 Petunia axillaris HOM05D003790 ORTHO05D004481 8.3e-32 141.0 183 41.5
Eucgr.L01709 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.4e-31 140.2 166 47.6
Nitab4.5_0010548g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 1.4e-31 140.2 176 44.9
Atru.chr5.1052 Acer truncatum HOM05D003790 ORTHO05D004481 2.4e-31 139.4 163 52.1
Rhsim01G0289200 Rhododendron simsii HOM05D003790 ORTHO05D004481 3.2e-31 139.0 175 44.6
Oeu005872.1 Olea europaea HOM05D003790 ORTHO05D004481 4.1e-31 138.7 168 44.6
Peaxi162Scf00001g00254 Petunia axillaris HOM05D003790 ORTHO05D004481 4.1e-31 138.7 181 42.5
Sopen01g031450 Solanum pennellii HOM05D003790 ORTHO05D004481 7.0e-31 137.9 160 43.8
Sp1g01670 Schrenkiella parvula HOM05D003790 ORTHO05D004481 9.2e-31 137.5 160 47.5
C05p01360 Brassica napus HOM05D003790 ORTHO05D004481 1.2e-30 137.1 159 45.9
Carub.0001s0174 Capsella rubella HOM05D003790 ORTHO05D004481 1.2e-30 137.1 160 47.5
Thhalv10009571m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 1.2e-30 137.1 168 48.8
PGR119G2399 Punica granatum HOM05D003790 ORTHO05D004481 1.2e-30 137.1 162 46.9
Solyc01g079660.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 1.6e-30 136.7 173 41.0
Sopen01g031440 Solanum pennellii HOM05D003790 ORTHO05D004481 2.1e-30 136.3 172 41.9
Dinv10067 Davidia involucrata HOM05D003790 ORTHO05D004481 2.7e-30 136.0 167 47.9
AL1G12020 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 4.6e-30 135.2 158 44.9
BcaB03g15798 Brassica carinata HOM05D003790 ORTHO05D004481 4.6e-30 135.2 158 46.2
Eucgr.H01059 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.6e-30 135.2 165 45.5
Eucgr.H01065 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.6e-30 135.2 171 43.9
RcHm_v2.0_Chr7g0241911 Rosa chinensis HOM05D003790 ORTHO05D004481 4.6e-30 135.2 177 41.8
Ah.11g049420 Amaranthus hybridus HOM05D003790 ORTHO05D004481 6.0e-30 134.8 164 45.7
AT5G38700 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 1.0e-29 134.0 160 47.5
A10p01380 Brassica napus HOM05D003790 ORTHO05D004481 1.0e-29 134.0 159 45.3
BraA10t42414Z Brassica rapa HOM05D003790 ORTHO05D004481 1.0e-29 134.0 159 45.3
FAN04G0217 Fragaria x ananassa HOM05D003790 ORTHO05D004481 1.0e-29 134.0 179 40.8
HanXRQChr01g0000871 Helianthus annuus HOM05D003790 ORTHO05D004481 1.3e-29 133.7 173 46.2
BcaC07g42401 Brassica carinata HOM05D003790 ORTHO05D004481 1.7e-29 133.3 153 46.4
Eucgr.L01710 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.7e-29 133.3 161 44.1
FAN13G3073 Fragaria x ananassa HOM05D003790 ORTHO05D004481 1.7e-29 133.3 179 41.9
BolC5t28918H Brassica oleracea HOM05D003790 ORTHO05D004481 2.3e-29 132.9 159 44.0
PSO210G7449 Papaver somniferum HOM05D003790 ORTHO05D004481 3.0e-29 132.5 168 44.0
PSO761G0583 Papaver somniferum HOM05D003790 ORTHO05D004481 3.9e-29 132.1 172 43.6
BcaC07g42307 Brassica carinata HOM05D003790 ORTHO05D004481 6.6e-29 131.3 159 44.0
BraA03t12296Z Brassica rapa HOM05D003790 ORTHO05D004481 6.6e-29 131.3 163 49.7
Sp6g02070 Schrenkiella parvula HOM05D003790 ORTHO05D004481 8.6e-29 131.0 156 46.2
Nitab4.5_0000116g0080 Nicotiana tabacum HOM05D003790 ORTHO05D004481 1.1e-28 130.6 172 43.0
A03p31160 Brassica napus HOM05D003790 ORTHO05D004481 1.5e-28 130.2 162 48.1
Solyc01g079670.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 1.5e-28 130.2 160 42.5
CARHR001970 Cardamine hirsuta HOM05D003790 ORTHO05D004481 1.9e-28 129.8 156 44.9
C08p53190 Brassica napus HOM05D003790 ORTHO05D004481 2.5e-28 129.4 160 45.6
BolC8t52834H Brassica oleracea HOM05D003790 ORTHO05D004481 2.5e-28 129.4 160 45.6
HanXRQChr05g0137341 Helianthus annuus HOM05D003790 ORTHO05D004481 2.5e-28 129.4 172 45.3
FvH4_5g39610 Fragaria vesca HOM05D003790 ORTHO05D004481 3.3e-28 129.0 180 40.6
FAN08G1995 Fragaria x ananassa HOM05D003790 ORTHO05D004481 3.3e-28 129.0 180 40.6
FAN18G0157 Fragaria x ananassa HOM05D003790 ORTHO05D004481 3.3e-28 129.0 180 40.6
A09p68580 Brassica napus HOM05D003790 ORTHO05D004481 4.3e-28 128.6 159 42.8
BolC3t16086H Brassica oleracea HOM05D003790 ORTHO05D004481 4.3e-28 128.6 164 47.6
BraA09t42201Z Brassica rapa HOM05D003790 ORTHO05D004481 4.3e-28 128.6 159 42.8
Lj1C20T16 Lonicera japonica HOM05D003790 ORTHO05D004481 4.3e-28 128.6 167 40.1
BcaB01g02435 Brassica carinata HOM05D003790 ORTHO05D004481 5.6e-28 128.3 160 47.5
HanXRQChr05g0137351 Helianthus annuus HOM05D003790 ORTHO05D004481 7.3e-28 127.9 172 44.2
TAR362G0521 Trochodendron aralioides HOM05D003790 ORTHO05D004481 9.5e-28 127.5 159 44.7
Lj1C20T6 Lonicera japonica HOM05D003790 ORTHO05D004481 2.1e-27 126.3 167 41.3
Dinv33098 Davidia involucrata HOM05D003790 ORTHO05D004481 2.8e-27 125.9 201 41.8
BcaC01g06770 Brassica carinata HOM05D003790 ORTHO05D004481 3.6e-27 125.6 164 47.0
BcaC01g06771 Brassica carinata HOM05D003790 ORTHO05D004481 3.6e-27 125.6 164 47.0
C03p38000 Brassica napus HOM05D003790 ORTHO05D004481 3.6e-27 125.6 164 47.0
SalBow2G3380 Salvia bowleyana HOM05D003790 ORTHO05D004481 4.7e-27 125.2 166 49.4
AL6G50980 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 1.1e-26 124.0 154 44.8
AT4G02170 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 1.4e-26 123.6 156 44.2
ECA248G3170 Erigeron canadensis HOM05D003790 ORTHO05D004481 1.4e-26 123.6 171 43.9
Aa31LG5G1840 Aethionema arabicum HOM05D003790 ORTHO05D004481 1.8e-26 123.2 164 44.5
Actinidia21418 Actinidia chinensis HOM05D003790 ORTHO05D004481 2.3e-26 122.9 105 52.4
Eucgr.K03524 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.3e-26 122.9 175 41.1
Eucgr.H01062 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.2e-26 121.7 156 46.2
EL10As5g23497 Beta vulgaris HOM05D003790 ORTHO05D004481 6.8e-26 121.3 161 49.1
Migut.D00101 Erythranthe guttata HOM05D003790 ORTHO05D004481 1.5e-25 120.2 153 45.1
Thhalv10029373m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 1.5e-25 120.2 159 44.7
Prupe.8G269600 Prunus persica HOM05D003790 ORTHO05D004481 2.0e-25 119.8 175 38.9
SGA_v2.0_scaffold198G41126 Striga asiatica HOM05D003790 ORTHO05D004481 2.0e-25 119.8 172 44.8
Hma1.2p1_1302F.1_g274340 Hydrangea macrophylla HOM05D003790 ORTHO05D004481 3.4e-25 119.0 174 40.8
Carub.0006s3500 Capsella rubella HOM05D003790 ORTHO05D004481 4.4e-25 118.6 160 47.5
Cc08_g11830 Coffea canephora HOM05D003790 ORTHO05D004481 4.4e-25 118.6 205 37.1
Lsat_1_v5_gn_9_541 Lactuca sativa HOM05D003790 ORTHO05D004481 7.5e-25 117.9 179 39.7
Eucgr.L02503 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.7e-24 116.7 159 42.1
Sc17g0000570 Simmondsia chinensis HOM05D003790 ORTHO05D004481 3.7e-24 115.5 158 45.6
Oeu008453.1 Olea europaea HOM05D003688 ORTHO05D004481 3.2e-23 112.5 146 44.5
COL.COLO4_23265 Corchorus olitorius HOM05D003790 ORTHO05D004481 7.8e-22 107.8 155 40.6
HPP92_025189 Vanilla planifolia HOM05D003790 ORTHO05D004481 1.3e-21 107.1 164 37.2
Eucgr.K03525 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.9e-21 105.5 150 49.3
Eucgr.L01711 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.6e-20 101.7 131 42.0
AUR62011841 Chenopodium quinoa HOM05D003790 ORTHO05D004481 9.5e-20 100.9 158 37.3
HPP92_006897 Vanilla planifolia HOM05D003790 ORTHO05D004481 1.8e-18 96.7 95 49.5
AUR62024684 Chenopodium quinoa HOM05D003790 ORTHO05D004481 4.0e-18 95.5 150 36.7
Gohir.D12G130100 Gossypium hirsutum HOM05D003790 ORTHO05D004481 8.9e-18 94.4 135 41.5
Eucgr.E02488 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.2e-17 94.0 121 46.3
Thecc.01G102100 Theobroma cacao HOM05D003790 ORTHO05D004481 1.2e-17 94.0 164 39.0
CARHR250350 Cardamine hirsuta HOM05D003790 ORTHO05D004481 2.6e-17 92.8 109 50.5
Duzib264G0610 Durio zibethinus HOM05D003790 ORTHO05D004481 3.4e-17 92.4 163 38.0
MD11G1317200 Malus domestica HOM05D003790 ORTHO05D004481 4.4e-17 92.0 204 33.8
HPP92_011875 Vanilla planifolia HOM05D003790 ORTHO05D004481 4.2e-15 85.5 166 44.0
Eucgr.F04057 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.4e-15 85.1 128 42.2
Eucgr.L00541 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.4e-15 85.1 95 48.4
Nn6g33912 Nelumbo nucifera HOM05D003790 ORTHO05D004481 5.4e-15 85.1 84 45.2
Eucgr.F04083 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.7e-13 80.1 127 40.2
MD03G1297400 Malus domestica HOM05D003790 ORTHO05D004481 3.0e-13 79.3 96 45.8
SGA_v2.0_scaffold334G49053 Striga asiatica HOM05D003790 ORTHO05D004481 3.3e-12 75.9 123 39.0
Eucgr.A02768 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.3e-12 75.5 66 50.0
CsaV3_4G001110 Cucumis sativus L. HOM05D003790 ORTHO05D044967 7.3e-12 74.7 164 39.0
Duzib147G1191 Durio zibethinus HOM05D003790 ORTHO05D004481 1.2e-11 73.9 168 35.1
Os03g0302800 Oryza sativa ssp. japonica HOM05D003790 ORTHO05D004481 4.7e-11 72.0 189 29.6
MELO3C017926.2 Cucumis melo HOM05D003790 ORTHO05D044967 1.4e-10 70.5 163 41.1
Thhalv10029363m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 2.4e-10 69.7 133 34.6
Zm00001eb014210 Zea mays HOM05D003790 ORTHO05D004481 2.4e-10 69.7 198 31.8
ATR0706G232 Amborella trichopoda HOM05D003790 ORTHO05D004481 3.1e-10 69.3 173 27.7
Eucgr.H01752 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.2e-09 67.4 53 62.3
COL.COLO4_09960 Corchorus olitorius HOM05D003790 ORTHO05D004481 3.4e-09 65.9 165 31.5
Nn2g14986 Nelumbo nucifera HOM05D003790 ORTHO05D004481 2.2e-08 63.2 49 46.9
Sc17g0000580 Simmondsia chinensis HOM05D003790 ORTHO05D004481 6.4e-08 61.6 131 42.7
ATR1125G087 Amborella trichopoda HOM05D007903 ORTHO05D009925 3.2e-07 59.3 179 27.9
Zm00001eb396420 Zea mays HOM05D003790 ORTHO05D004481 7.1e-07 58.2 89 39.3


User provided reference genes

Program Settings