Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014568 Sechium edule HOM05D006572 ORTHO05D008181 2.7e-236 822.0 554 100.0
MELO3C016288.2 Cucumis melo HOM05D006572 ORTHO05D008181 1.2e-183 647.1 578 82.0
ClCG07G015010 Citrullus lanatus HOM05D006572 ORTHO05D008181 5.4e-168 595.1 551 80.0
CsaV3_4G006550 Cucumis sativus L. HOM05D006572 ORTHO05D008181 6.1e-143 511.9 473 82.9
Gohir.D03G082800 Gossypium hirsutum HOM05D006572 ORTHO05D008181 5.3e-115 419.1 553 59.5
Glyma.05G216500 Glycine max HOM05D006572 ORTHO05D008181 9.8e-109 398.3 552 55.1
Eucgr.E00859 Eucalyptus grandis HOM05D006572 ORTHO05D008181 8.3e-108 395.2 552 55.1
COL.COLO4_10694 Corchorus olitorius HOM05D006572 ORTHO05D008181 2.4e-107 393.7 578 41.2
Prupe.5G118200 Prunus persica HOM05D006572 ORTHO05D008181 1.6e-106 391.0 549 57.4
Duzib205G1524 Durio zibethinus HOM05D006572 ORTHO05D008181 5.0e-105 386.0 553 51.7
FAN18G3438 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.1e-104 384.8 562 45.4
Thecc.03G297200 Theobroma cacao HOM05D006572 ORTHO05D008181 6.1e-103 379.0 555 46.5
FAN04G0113 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.4e-102 377.9 573 40.3
Gorai.003G080600 Gossypium raimondii HOM05D006572 ORTHO05D008181 7.5e-101 372.1 553 55.9
Gohir.A02G101400 Gossypium hirsutum HOM05D006572 ORTHO05D008181 4.9e-100 369.4 553 55.2
CiPaw.12G083500 Carya illinoinensis HOM05D006572 ORTHO05D008181 8.3e-100 368.6 553 55.5
FAN18G4203 Fragaria x ananassa HOM05D006572 ORTHO05D008181 8.3e-100 368.6 577 45.4
Duzib068G0791 Durio zibethinus HOM05D006572 ORTHO05D008181 1.4e-99 367.9 553 53.7
Manes.02G010400 Manihot esculenta HOM05D006572 ORTHO05D008181 1.4e-99 367.9 552 49.5
Potri.001G092000 Populus trichocarpa HOM05D006572 ORTHO05D008181 5.9e-98 362.5 553 49.9
FAN08G2039 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.7e-97 360.9 573 49.6
Phvul.002G297700 Phaseolus vulgaris HOM05D006572 ORTHO05D008181 3.9e-97 359.8 551 51.0
Medtr8g099415 Medicago truncatula HOM05D006572 ORTHO05D008181 6.6e-97 359.0 549 42.8
TWI60G0540 Tripterygium wilfordii HOM05D006572 ORTHO05D008181 6.6e-97 359.0 551 48.6
Ciclev10019283m.g Citrus clementina HOM05D006572 ORTHO05D008181 1.5e-96 357.8 551 51.0
Actinidia04204 Actinidia chinensis HOM05D006572 ORTHO05D008181 1.6e-95 354.4 550 54.7
Lalb_Chr05g0224161 Lupinus albus HOM05D006572 ORTHO05D008181 1.8e-94 350.9 552 48.2
Rhsim02G0242800 Rhododendron simsii HOM05D006572 ORTHO05D008181 2.3e-94 350.5 541 51.0
FvH4_5g04510 Fragaria vesca HOM05D006572 ORTHO05D008181 3.1e-94 350.1 567 43.9
Lj4g0027687 Lotus japonicus HOM05D006572 ORTHO05D008181 6.8e-94 349.0 543 40.7
VMungo0251G1431 Vigna mungo HOM05D006572 ORTHO05D008181 4.9e-92 342.8 577 41.8
CSS0002826 Camellia sinensis var. sinensis HOM05D006572 ORTHO05D008181 6.4e-92 342.4 550 53.6
DCAR_029886 Daucus carota HOM05D006572 ORTHO05D008181 8.3e-92 342.0 549 53.9
Psat7g026640 Pisum sativum HOM05D006572 ORTHO05D008181 1.1e-91 341.7 553 50.1
Sabra01G0068400 Salix brachista HOM05D006572 ORTHO05D008181 1.9e-91 340.9 539 48.8
MD14G1128100 Malus domestica HOM05D006572 ORTHO05D008181 2.0e-90 337.4 553 54.4
Nitab4.5_0005537g0050 Nicotiana tabacum HOM05D006572 ORTHO05D008181 2.5e-88 330.5 540 43.0
SalBow1G0494 Salvia bowleyana HOM05D006572 ORTHO05D008181 7.3e-88 328.9 533 47.1
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea HOM05D006572 ORTHO05D008181 2.1e-87 327.4 552 56.7
GSVIVG01019526001 Vitis vinifera HOM05D006572 ORTHO05D008181 2.1e-87 327.4 543 49.9
Peaxi162Scf00074g00932 Petunia axillaris HOM05D006572 ORTHO05D008181 3.6e-87 326.6 513 48.0
RcHm_v2.0_Chr7g0194941 Rosa chinensis HOM05D006572 ORTHO05D008181 6.8e-86 322.4 573 49.2
PGR042G1206 Punica granatum HOM05D006572 ORTHO05D008181 1.2e-85 321.6 551 53.7
PSO384G1203 Papaver somniferum HOM05D006572 ORTHO05D008181 4.4e-85 319.7 560 55.5
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea HOM05D006572 ORTHO05D008181 5.8e-85 319.3 552 56.5
Lj8C208G13 Lonicera japonica HOM05D006572 ORTHO05D008181 7.5e-85 318.9 551 46.5
CANSAT21G1897 Cannabis sativa HOM05D006572 ORTHO05D008181 1.3e-84 318.2 555 57.1
Nitab4.5_0001231g0070 Nicotiana tabacum HOM05D006572 ORTHO05D008181 1.1e-83 315.1 571 45.2
PGSC0003DMG400012287 Solanum tuberosum HOM05D006572 ORTHO05D008181 5.4e-83 312.8 513 52.6
HanXRQChr02g0047891 Helianthus annuus HOM05D006572 ORTHO05D008181 2.7e-82 310.5 524 49.6
Nn3g19021 Nelumbo nucifera HOM05D006572 ORTHO05D008181 6.0e-82 309.3 555 52.6
Migut.A00646 Erythranthe guttata HOM05D006572 ORTHO05D008181 3.0e-81 307.0 548 43.8
Sopen08g030540 Solanum pennellii HOM05D006572 ORTHO05D008181 8.6e-81 305.4 546 50.5
Solyc08g082270.3 Solanum lycopersicum HOM05D006572 ORTHO05D008181 1.9e-80 304.3 546 50.7
AUR62010836 Chenopodium quinoa HOM05D006572 ORTHO05D008181 4.3e-80 303.1 551 55.2
ECA233G0093 Erigeron canadensis HOM05D006572 ORTHO05D008181 6.2e-79 299.3 548 42.7
SHI08936 Sapria himalayana HOM05D006572 ORTHO05D008181 8.1e-79 298.9 558 46.2
AUR62019834 Chenopodium quinoa HOM05D006572 ORTHO05D008181 4.0e-78 296.6 551 45.4
Cc08_g16020 Coffea canephora HOM05D006572 ORTHO05D008181 1.2e-77 295.0 551 48.8
EL10Ac5g12911 Beta vulgaris HOM05D006572 ORTHO05D008181 9.9e-77 292.0 563 40.9
Oeu031670.2 Olea europaea HOM05D006572 ORTHO05D008181 6.4e-76 289.3 563 47.4
TAR636G1103 Trochodendron aralioides HOM05D006572 ORTHO05D008181 2.4e-75 287.3 512 52.5
vmacro11428 Vaccinium macrocarpon HOM05D006572 ORTHO05D008181 4.1e-75 286.6 594 46.5
Lsat_1_v5_gn_6_12380 Lactuca sativa HOM05D006572 ORTHO05D008181 2.1e-74 284.3 517 51.1
MSTRG.25670 Avicennia marina HOM05D006572 ORTHO05D008181 1.0e-73 282.0 513 43.5
BcaNung04237 Brassica carinata HOM05D006572 ORTHO05D008181 1.0e-73 282.0 550 44.0
C07p53150 Brassica napus HOM05D006572 ORTHO05D008181 1.0e-73 282.0 550 44.0
SGA_v2.0_scaffold96G28963 Striga asiatica HOM05D006572 ORTHO05D008181 8.6e-73 278.9 568 43.3
Hund11391 Selenicereus undatus HOM05D006572 ORTHO05D008181 9.6e-72 275.4 547 46.8
BolC7t45811H Brassica oleracea HOM05D006572 ORTHO05D008181 1.2e-71 275.0 550 43.6
Atru.BG.201.p Acer truncatum HOM05D006572 ORTHO05D008181 2.1e-71 274.2 369 71.3
Haze_08618 Corylus avellana HOM05D006572 ORTHO05D008181 2.8e-71 273.9 495 47.1
Ah.12g052520 Amaranthus hybridus HOM05D006572 ORTHO05D008181 3.6e-71 273.5 550 48.0
Aqoxy5G04214 Aquilegia oxysepala HOM05D006572 ORTHO05D008181 1.8e-70 271.2 546 44.9
A03p54790 Brassica napus HOM05D006572 ORTHO05D008181 1.8e-70 271.2 549 40.6
BraA03t14546Z Brassica rapa HOM05D006572 ORTHO05D008181 1.8e-70 271.2 549 40.6
ATR0188G004 Amborella trichopoda HOM05D006572 ORTHO05D008181 1.5e-69 268.1 536 48.1
CARHR231220 Cardamine hirsuta HOM05D006572 ORTHO05D008181 1.5e-69 268.1 520 46.9
TPR.G3379 Trifolium pratense HOM05D006572 ORTHO05D008181 3.8e-68 263.5 552 47.3
Dinv37535 Davidia involucrata HOM05D006572 ORTHO05D008181 2.4e-67 260.8 327 54.4
Os05g0212200 Oryza sativa ssp. japonica HOM05D006572 ORTHO05D008181 1.2e-66 258.5 513 56.1
TAR629G2735 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.6e-66 258.1 386 57.5
THA.LOC104815028 Tarenaya hassleriana HOM05D006572 ORTHO05D008181 2.1e-66 257.7 554 52.0
AL7G29520 Arabidopsis lyrata HOM05D006572 ORTHO05D008181 6.0e-66 256.1 556 50.5
AT4G23840 Arabidopsis thaliana HOM05D006572 ORTHO05D008181 1.7e-65 254.6 557 49.7
Cfa021209 Carpinus fangiana HOM05D006572 ORTHO05D008181 6.6e-65 252.7 474 48.9
Zm00001eb350650 Zea mays HOM05D006572 ORTHO05D008181 1.4e-62 245.0 514 52.7
Dinv38835 Davidia involucrata HOM05D006572 ORTHO05D008181 2.6e-61 240.7 327 45.0
MBI06_g08449_MAGBIO Magnolia biondii HOM05D006572 ORTHO05D008181 3.8e-60 236.9 484 36.8
SEGI_00989 Sequoiadendron giganteum HOM05D006572 ORTHO05D008181 1.6e-58 231.5 551 47.7
Thhalv10024706m.g Eutrema salsugineum HOM05D006572 ORTHO05D008181 6.0e-58 229.6 545 48.3
Sp7g21790 Schrenkiella parvula HOM05D006572 ORTHO05D008181 5.1e-57 226.5 557 47.4
Carub.0007s1729 Capsella rubella HOM05D006572 ORTHO05D008181 1.3e-55 221.9 556 44.2
CAN.G532.118 Capsicum annuum HOM05D006572 ORTHO05D008181 3.4e-53 213.8 435 43.0
HPP92_024023 Vanilla planifolia HOM05D006572 ORTHO05D008181 4.9e-52 209.9 536 49.4
Aa31LG6G7050 Aethionema arabicum HOM05D006572 ORTHO05D008181 8.4e-52 209.1 526 50.2
Pp3c22_12260 Physcomitrium patens HOM05D006572 ORTHO05D008181 4.5e-45 186.8 510 27.3
CDE03G0094 Ceratophyllum demersum HOM05D006572 ORTHO05D008181 8.4e-44 182.6 482 45.0
Ca_17483_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 3.5e-42 177.2 552 27.5
Ca_17508_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 3.5e-42 177.2 552 27.5
SMO232G0056 Selaginella moellendorffii HOM05D006572 ORTHO05D008181 3.5e-42 177.2 519 34.9
FAN13G1782 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.1e-40 172.2 286 49.0
Sc22g0005020 Simmondsia chinensis HOM05D006572 ORTHO05D008181 6.9e-38 162.9 327 34.3
BcaNung04088 Brassica carinata HOM05D006572 ORTHO05D008181 9.3e-35 152.5 475 39.4
unitig_748.g8129 Utricularia gibba HOM05D006572 ORTHO05D008181 1.1e-24 119.0 157 42.0
Dinv37534 Davidia involucrata HOM05D006572 ORTHO05D008181 4.8e-23 113.6 187 40.6
unitig_748.g8130 Utricularia gibba HOM05D006572 ORTHO05D008181 8.8e-17 92.8 228 46.1
TAR376G0673 Trochodendron aralioides HOM05D006572 ORTHO05D008181 8.2e-15 86.3 116 44.8
QL12p023582 Quercus lobata HOM05D006572 ORTHO05D008181 1.0e-09 69.3 48 68.8
CBR_g39933 Chara braunii HOM05D006572 ORTHO05D008181 1.8e-09 68.6 89 41.6
QL93p2003_0058 Quercus lobata HOM05D006572 ORTHO05D008181 3.0e-09 67.8 48 66.7


User provided reference genes

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