Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 8.4e-162 573.9 358 100.0
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 1.4e-124 450.3 358 76.0
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 2.4e-108 396.4 359 65.5
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 1.2e-107 394.0 355 65.4
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 4.5e-107 392.1 362 63.5
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 1.7e-106 390.2 354 65.3
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 1.7e-106 390.2 351 65.5
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 2.2e-106 389.8 354 65.3
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 8.5e-106 387.9 359 64.1
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 4.0e-103 379.0 359 61.8
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 1.2e-102 377.5 354 63.3
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 4.4e-102 375.6 360 72.5
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 9.8e-102 374.4 354 62.7
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 4.8e-101 372.1 350 61.4
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 6.3e-101 371.7 359 61.8
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 8.3e-101 371.3 358 61.5
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 1.1e-100 370.9 359 61.0
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 2.4e-100 369.8 359 61.6
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 5.4e-100 368.6 358 62.6
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 9.1e-100 367.9 359 61.6
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 7.7e-99 364.8 355 62.8
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 2.3e-98 363.2 363 58.7
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 2.3e-98 363.2 349 61.6
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 8.6e-98 361.3 370 57.0
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 7.2e-97 358.2 366 60.9
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 1.2e-96 357.5 355 61.1
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 8.0e-96 354.8 336 58.9
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 1.3e-93 347.4 360 56.4
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 2.8e-93 346.3 366 67.5
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 3.7e-93 345.9 355 60.0
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 4.1e-92 342.4 372 57.3
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 4.1e-92 342.4 356 59.8
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 1.2e-91 340.9 331 63.1
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 1.2e-91 340.9 364 61.5
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 2.7e-91 339.7 338 59.8
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 3.5e-91 339.3 353 58.9
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 7.8e-91 338.2 348 59.8
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 2.3e-90 336.7 358 56.7
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 2.3e-90 336.7 348 62.4
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 3.8e-90 335.9 357 57.4
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 3.8e-90 335.9 348 62.6
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 5.0e-90 335.5 348 62.4
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 5.0e-90 335.5 348 62.4
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 6.6e-90 335.1 352 59.1
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 6.6e-90 335.1 352 57.7
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 8.6e-90 334.7 350 60.9
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 1.9e-89 333.6 350 60.9
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 5.6e-89 332.0 376 55.1
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 7.3e-89 331.6 379 56.7
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 9.5e-89 331.3 375 64.8
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 2.3e-87 326.6 378 53.2
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 2.6e-86 323.2 404 52.5
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 3.4e-86 322.8 355 57.2
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 3.4e-86 322.8 357 56.3
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 7.5e-86 321.6 354 65.0
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 9.8e-86 321.2 362 58.0
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 2.9e-85 319.7 353 58.6
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 3.7e-85 319.3 348 55.5
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 3.7e-85 319.3 358 57.5
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 4.9e-85 318.9 296 64.2
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 6.4e-85 318.5 350 63.7
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 1.1e-84 317.8 339 59.9
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 1.8e-84 317.0 400 51.5
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 6.0e-83 312.0 370 54.9
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 6.0e-83 312.0 375 54.4
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 1.7e-82 310.5 367 62.9
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 1.7e-82 310.5 367 56.4
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 1.7e-82 310.5 378 52.6
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 8.6e-82 308.1 291 63.2
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 1.1e-81 307.8 353 55.0
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 8.0e-80 301.6 390 51.3
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 1.8e-79 300.4 365 55.1
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 1.2e-78 297.7 349 61.9
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 1.2e-78 297.7 279 59.5
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 7.5e-78 295.0 345 53.6
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 3.2e-76 289.7 266 70.3
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 5.4e-76 288.9 377 55.7
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 5.0e-74 282.3 348 54.6
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 8.6e-74 281.6 356 52.8
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 1.2e-72 277.7 375 50.9
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 1.4e-71 274.2 351 55.3
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 3.1e-71 273.1 291 58.4
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 5.2e-71 272.3 406 50.2
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 4.4e-70 269.2 359 50.7
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 1.7e-69 267.3 294 55.8
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 3.6e-64 249.6 348 45.1
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 2.6e-62 243.4 369 49.3
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 2.7e-59 233.4 403 44.7
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 5.6e-57 225.7 338 48.2
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 5.2e-55 219.2 361 47.1
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 5.4e-52 209.1 308 49.0
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 4.6e-51 206.1 361 41.6
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 6.0e-51 205.7 368 41.3
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 3.3e-49 199.9 357 45.7
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 4.8e-48 196.1 299 45.8
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 8.4e-45 185.3 272 47.4
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 8.4e-45 185.3 275 49.1
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 2.7e-43 180.3 402 41.5
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 3.5e-43 179.9 196 73.5
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 1.4e-39 167.9 149 58.4
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 1.8e-39 167.5 258 48.4
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 3.1e-39 166.8 137 61.3
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 1.5e-38 164.5 271 44.3
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 2.4e-36 157.1 381 35.4
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 3.5e-35 153.3 351 39.6
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 1.6e-32 144.4 97 78.4
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 2.9e-29 133.7 166 50.0
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 1.3e-26 124.8 189 45.0
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 6.5e-21 105.9 62 88.7
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 9.4e-20 102.1 69 79.7
MCO15G439 Micromonas commoda HOM05D006889 ORTHO05D008614 8.8e-18 95.5 295 33.2
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 1.0e-13 82.0 297 32.0
PRCOL_00000609 Prasinoderma coloniale HOM05D006889 ORTHO05D008614 8.5e-13 79.0 123 38.2
FAN28G2910 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.4e-12 78.2 125 48.0
SHI02510 Sapria himalayana HOM05D006889 ORTHO05D008614 2.6e-09 67.4 36 83.3
TPR.G34759 Trifolium pratense HOM05D006889 ORTHO05D008614 7.0e-07 59.3 98 39.8


User provided reference genes

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