Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 4.4e-72 274.6 149 100.0
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 4.0e-57 224.9 144 84.0
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 1.3e-55 219.9 144 83.3
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 1.7e-55 219.5 153 80.4
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 3.1e-33 145.6 124 64.5
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 3.4e-32 142.1 141 57.4
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 1.7e-31 139.8 145 57.9
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 2.9e-31 139.0 141 56.7
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 4.9e-31 138.3 126 65.9
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 1.1e-30 137.1 140 57.1
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 1.4e-30 136.7 143 55.9
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 1.4e-30 136.7 140 56.4
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 5.4e-30 134.8 143 55.9
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 7.1e-30 134.4 134 61.2
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 1.2e-29 133.7 136 57.4
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 2.7e-29 132.5 137 54.7
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 3.5e-29 132.1 115 60.9
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 6.0e-29 131.3 125 62.4
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 6.0e-29 131.3 125 62.4
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 6.0e-29 131.3 144 54.9
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 6.0e-29 131.3 147 53.7
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 7.8e-29 131.0 96 70.8
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 1.7e-28 129.8 111 66.7
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 1.7e-28 129.8 131 59.5
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 3.0e-28 129.0 130 58.5
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 8.7e-28 127.5 100 64.0
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 1.5e-27 126.7 105 62.9
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 1.5e-27 126.7 107 60.7
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 1.5e-27 126.7 151 53.0
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 1.5e-27 126.7 139 55.4
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 3.3e-27 125.6 129 55.0
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 3.3e-27 125.6 120 57.5
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 4.3e-27 125.2 117 57.3
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 5.6e-27 124.8 106 67.9
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 5.6e-27 124.8 111 61.3
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 5.6e-27 124.8 111 61.3
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 5.6e-27 124.8 111 61.3
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 7.3e-27 124.4 98 67.3
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 7.3e-27 124.4 136 53.7
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 9.6e-27 124.0 138 52.2
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 9.6e-27 124.0 94 70.2
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 1.2e-26 123.6 94 69.1
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.2e-26 123.6 123 58.5
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 1.2e-26 123.6 133 55.6
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.6e-26 123.2 123 58.5
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 2.1e-26 122.9 109 58.7
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 2.8e-26 122.5 130 55.4
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 2.8e-26 122.5 145 49.0
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 2.8e-26 122.5 127 52.8
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 2.8e-26 122.5 123 57.7
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 4.7e-26 121.7 151 47.0
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 4.7e-26 121.7 127 55.1
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 6.2e-26 121.3 92 65.2
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 6.2e-26 121.3 108 60.2
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 6.2e-26 121.3 142 52.1
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 6.2e-26 121.3 147 49.0
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 6.2e-26 121.3 129 52.7
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 8.1e-26 120.9 127 53.5
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 1.1e-25 120.6 107 58.9
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 1.1e-25 120.6 137 51.1
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 1.8e-25 119.8 96 63.5
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 1.8e-25 119.8 96 63.5
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 1.8e-25 119.8 87 73.6
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 1.8e-25 119.8 92 66.3
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 1.8e-25 119.8 116 56.0
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 1.8e-25 119.8 128 52.3
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 2.4e-25 119.4 105 61.9
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 2.4e-25 119.4 103 63.1
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 2.4e-25 119.4 127 55.1
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 2.4e-25 119.4 117 57.3
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 3.1e-25 119.0 92 67.4
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 5.2e-25 118.2 94 63.8
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 6.9e-25 117.9 107 57.9
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 6.9e-25 117.9 127 52.8
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 9.0e-25 117.5 126 54.0
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 1.5e-24 116.7 100 61.0
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 1.5e-24 116.7 121 56.2
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 1.5e-24 116.7 99 62.6
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 2.6e-24 115.9 124 54.0
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 2.6e-24 115.9 86 65.1
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 3.4e-24 115.5 107 56.1
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 4.4e-24 115.2 93 63.4
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 5.8e-24 114.8 113 57.5
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 1.7e-23 113.2 137 47.4
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 2.2e-23 112.8 142 49.3
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 2.9e-23 112.5 129 48.1
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 3.8e-23 112.1 103 59.2
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 4.9e-23 111.7 84 67.9
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 1.1e-22 110.5 123 48.8
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 1.9e-22 109.8 96 60.4
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 2.4e-22 109.4 145 47.6
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 2.4e-22 109.4 104 56.7
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 6.0e-21 104.8 169 40.2
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 7.8e-21 104.4 110 46.4
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 8.7e-20 100.9 103 55.3
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 8.7e-20 100.9 91 60.4
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 4.3e-19 98.6 81 63.0
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 7.3e-19 97.8 85 62.4
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 2.1e-18 96.3 88 58.0
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 8.1e-18 94.4 121 43.0
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 1.4e-17 93.6 99 49.5
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 3.1e-17 92.4 92 54.3
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 1.2e-16 90.5 75 62.7
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 4.5e-16 88.6 104 49.0
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 5.8e-16 88.2 128 39.8
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 1.7e-15 86.7 139 38.8
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 3.8e-15 85.5 93 43.0
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 1.9e-14 83.2 107 48.6
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 3.2e-14 82.4 92 47.8
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 9.3e-14 80.9 52 76.9
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 2.7e-13 79.3 54 74.1
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 2.3e-12 76.3 90 45.6
Haze_08531 Corylus avellana HOM05D007055 ORTHO05D008943 4.2e-06 55.5 77 45.5


User provided reference genes

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