Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014526 Sechium edule HOM05D007389 ORTHO05D009400 1.7e-213 745.7 381 100.0
ClCG05G022970 Citrullus lanatus HOM05D007389 ORTHO05D009400 3.4e-177 625.2 379 83.6
CsaV3_5G034040 Cucumis sativus L. HOM05D007389 ORTHO05D009400 1.4e-170 603.2 379 81.0
MELO3C012220.2 Cucumis melo HOM05D007389 ORTHO05D009400 2.4e-159 565.8 368 80.7
GSVIVG01011940001 Vitis vinifera HOM05D007389 ORTHO05D009400 5.5e-127 458.4 378 60.6
Cfa018619 Carpinus fangiana HOM05D007389 ORTHO05D009400 6.0e-126 454.9 379 61.2
Prupe.1G306500 Prunus persica HOM05D007389 ORTHO05D009400 2.5e-124 449.5 380 60.0
RcHm_v2.0_Chr4g0435681 Rosa chinensis HOM05D007389 ORTHO05D009400 4.1e-122 442.2 381 58.8
TWI31G0236 Tripterygium wilfordii HOM05D007389 ORTHO05D009400 2.0e-121 439.9 379 57.8
FvH4_4g27970 Fragaria vesca HOM05D007389 ORTHO05D009400 5.9e-121 438.3 379 58.0
Ciclev10031830m.g Citrus clementina HOM05D007389 ORTHO05D009400 3.8e-120 435.6 380 57.9
Potri.010G128700 Populus trichocarpa HOM05D007389 ORTHO05D009400 1.6e-118 430.3 381 59.1
MD13G1045500 Malus domestica HOM05D007389 ORTHO05D009400 3.6e-118 429.1 379 58.0
COL.COLO4_07880 Corchorus olitorius HOM05D007389 ORTHO05D009400 1.0e-117 427.6 372 57.5
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 6.7e-117 424.9 373 59.2
FAN17G2097 Fragaria x ananassa HOM05D007389 ORTHO05D009400 1.1e-116 424.1 379 56.7
Gorai.008G185300 Gossypium raimondii HOM05D007389 ORTHO05D009400 1.5e-116 423.7 379 56.7
CiPaw.15G004300 Carya illinoinensis HOM05D007389 ORTHO05D009400 4.3e-116 422.2 361 60.1
Gohir.A12G169500 Gossypium hirsutum HOM05D007389 ORTHO05D009400 4.3e-116 422.2 379 56.2
Gohir.D12G172800 Gossypium hirsutum HOM05D007389 ORTHO05D009400 4.3e-116 422.2 379 56.5
Thecc.02G359800 Theobroma cacao HOM05D007389 ORTHO05D009400 1.3e-115 420.6 379 56.7
Sabra10G0097900 Salix brachista HOM05D007389 ORTHO05D009400 3.1e-114 416.0 380 57.1
TAR371G0503 Trochodendron aralioides HOM05D007389 ORTHO05D009400 1.5e-113 413.7 353 60.6
CSS0047863 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 2.6e-113 412.9 365 57.5
Nn4g23752 Nelumbo nucifera HOM05D007389 ORTHO05D009400 3.4e-113 412.5 363 59.2
Actinidia16624 Actinidia chinensis HOM05D007389 ORTHO05D009400 4.5e-113 412.1 379 55.1
Rhsim09G0111300 Rhododendron simsii HOM05D007389 ORTHO05D009400 4.5e-113 412.1 379 55.9
Hma1.2p1_0406F.1_g146090 Hydrangea macrophylla HOM05D007389 ORTHO05D009400 5.9e-113 411.8 377 56.2
Eucgr.B03042 Eucalyptus grandis HOM05D007389 ORTHO05D009400 7.7e-113 411.4 381 56.2
PGR102G2947 Punica granatum HOM05D007389 ORTHO05D009400 7.2e-111 404.8 380 53.7
Manes.06G071400 Manihot esculenta HOM05D007389 ORTHO05D009400 1.6e-110 403.7 379 55.1
CSS0013871 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 3.6e-110 402.5 357 58.3
Phvul.003G028200 Phaseolus vulgaris HOM05D007389 ORTHO05D009400 6.7e-109 398.3 381 54.1
SEGI_35624 Sequoiadendron giganteum HOM05D007389 ORTHO05D009400 4.4e-108 395.6 377 53.6
Nn3g17765 Nelumbo nucifera HOM05D007389 ORTHO05D009400 5.7e-108 395.2 378 54.2
Lj2g0025946 Lotus japonicus HOM05D007389 ORTHO05D009400 7.4e-108 394.8 383 53.3
Lalb_Chr10g0099831 Lupinus albus HOM05D007389 ORTHO05D009400 3.1e-106 389.4 378 54.2
vmacro10536 Vaccinium macrocarpon HOM05D007389 ORTHO05D009400 4.1e-106 389.0 363 54.8
Cc11_g10500 Coffea canephora HOM05D007389 ORTHO05D009400 7.0e-106 388.3 378 52.6
HanXRQChr16g0529211 Helianthus annuus HOM05D007389 ORTHO05D009400 1.5e-105 387.1 378 52.1
ATR0681G192 Amborella trichopoda HOM05D007389 ORTHO05D009400 5.9e-105 385.2 363 53.2
Glyma.02G098600 Glycine max HOM05D007389 ORTHO05D009400 1.3e-104 384.0 380 51.8
Nitab4.5_0014175g0010 Nicotiana tabacum HOM05D007389 ORTHO05D009400 1.9e-103 380.2 379 50.7
Sopen04g002110 Solanum pennellii HOM05D007389 ORTHO05D009400 1.9e-103 380.2 378 50.3
PGSC0003DMG400007468 Solanum tuberosum HOM05D007389 ORTHO05D009400 7.2e-103 378.3 378 50.3
ECA234G1470 Erigeron canadensis HOM05D007389 ORTHO05D009400 1.6e-102 377.1 378 51.3
Sc11g0003170 Simmondsia chinensis HOM05D007389 ORTHO05D009400 2.7e-102 376.3 379 52.8
SalBow8G0691 Salvia bowleyana HOM05D007389 ORTHO05D009400 2.2e-99 366.7 381 49.3
FAN22G0259 Fragaria x ananassa HOM05D007389 ORTHO05D009400 2.8e-99 366.3 338 56.8
Lsat_1_v5_gn_4_20121 Lactuca sativa HOM05D007389 ORTHO05D009400 2.4e-98 363.2 381 49.6
Nitab4.5_0000280g0020 Nicotiana tabacum HOM05D007389 ORTHO05D009400 9.1e-98 361.3 379 50.1
Peaxi162Scf00086g00615 Petunia axillaris HOM05D007389 ORTHO05D009400 1.6e-97 360.5 380 50.0
THA.LOC104825707 Tarenaya hassleriana HOM05D007389 ORTHO05D009400 2.9e-96 356.3 379 49.6
VMungo1215G1613 Vigna mungo HOM05D007389 ORTHO05D009400 2.9e-96 356.3 358 52.0
AUR62035272 Chenopodium quinoa HOM05D007389 ORTHO05D009400 3.6e-94 349.4 376 48.9
CDE08G0863 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 3.0e-93 346.3 383 48.0
Pp3c18_11800 Physcomitrium patens HOM05D007389 ORTHO05D009400 3.0e-93 346.3 377 48.0
CDE02G3618 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 1.5e-92 344.0 383 47.5
Duzib268G0586 Durio zibethinus HOM05D007389 ORTHO05D009400 2.0e-92 343.6 319 55.2
Hund25095 Selenicereus undatus HOM05D007389 ORTHO05D009400 2.0e-92 343.6 367 49.9
SGA_v2.0_scaffold124G33583 Striga asiatica HOM05D007389 ORTHO05D009400 9.7e-92 341.3 380 47.6
Migut.E00312 Erythranthe guttata HOM05D007389 ORTHO05D009400 2.4e-90 336.7 379 46.7
AagrBONN_evm.TU.Sc2ySwM_228.4489 Anthoceros agrestis HOM05D007389 ORTHO05D009400 3.1e-90 336.3 378 46.0
Lj3A1018T64 Lonicera japonica HOM05D007389 ORTHO05D009400 1.7e-88 330.5 361 50.4
Mapoly0108s0021 Marchantia polymorpha HOM05D007389 ORTHO05D009400 3.8e-88 329.3 381 44.9
Sp1g11820 Schrenkiella parvula HOM05D007389 ORTHO05D009400 4.7e-86 322.4 369 48.2
SMO361G0332 Selaginella moellendorffii HOM05D007389 ORTHO05D009400 4.4e-84 315.8 362 47.2
Pp3c15_5000 Physcomitrium patens HOM05D007389 ORTHO05D009400 7.5e-84 315.1 404 42.8
Oeu042041.1 Olea europaea HOM05D007389 ORTHO05D009400 1.3e-83 314.3 304 52.6
QL01p044805 Quercus lobata HOM05D007389 ORTHO05D009400 2.8e-83 313.2 264 60.2
Thhalv10009351m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 3.7e-83 312.8 370 47.3
BraA08t35158Z Brassica rapa HOM05D007389 ORTHO05D009400 2.4e-82 310.1 373 45.6
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 3.1e-82 309.7 373 45.3
Dinv21123 Davidia involucrata HOM05D007389 ORTHO05D009400 1.2e-81 307.8 268 60.1
BolC8t49230H Brassica oleracea HOM05D007389 ORTHO05D009400 3.5e-81 306.2 369 45.5
CARHR013690 Cardamine hirsuta HOM05D007389 ORTHO05D009400 3.5e-81 306.2 369 47.2
Carub.0001s1304 Capsella rubella HOM05D007389 ORTHO05D009400 2.9e-80 303.1 370 46.5
A08p32350 Brassica napus HOM05D007389 ORTHO05D009400 3.8e-80 302.8 373 44.8
AT1G13310 Arabidopsis thaliana HOM05D007389 ORTHO05D009400 2.5e-79 300.1 369 45.3
Cpa.g.sc1.212 Carica papaya HOM05D007389 ORTHO05D009400 6.1e-78 295.4 261 57.5
EL10Ac6g14465 Beta vulgaris HOM05D007389 ORTHO05D009400 7.5e-76 288.5 476 37.2
AL1G25070 Arabidopsis lyrata HOM05D007389 ORTHO05D009400 1.7e-75 287.3 370 44.1
PSO063G2802 Papaver somniferum HOM05D007389 ORTHO05D009400 8.3e-75 285.0 384 45.3
unitig_27.g25245 Utricularia gibba HOM05D007389 ORTHO05D009400 1.8e-74 283.9 368 42.7
Aa31LG1G1460 Aethionema arabicum HOM05D007389 ORTHO05D009400 9.2e-74 281.6 366 45.4
AagrBONN_evm.TU.Sc2ySwM_362.2055 Anthoceros agrestis HOM05D007389 ORTHO05D009400 1.8e-69 267.3 244 55.3
HPP92_023813 Vanilla planifolia HOM05D007389 ORTHO05D009400 1.2e-68 264.6 381 41.2
Thhalv10023040m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 6.6e-56 222.2 382 38.5
HanXRQChr17g0567921 Helianthus annuus HOM05D007389 ORTHO05D009400 1.1e-55 221.5 257 44.4
AUR62002912 Chenopodium quinoa HOM05D007389 ORTHO05D009400 3.3e-55 219.9 376 35.9
Actinidia14859 Actinidia chinensis HOM05D007389 ORTHO05D009400 9.5e-55 218.4 199 57.3
CBR_g39725 Chara braunii HOM05D001740 ORTHO05D001468 1.4e-50 204.5 263 43.7
BcaC06g31117 Brassica carinata HOM05D007389 ORTHO05D009400 2.8e-46 190.3 371 36.4
A06p42500 Brassica napus HOM05D001825 ORTHO05D002336 6.4e-43 179.1 371 35.6
BraA06t27163Z Brassica rapa HOM05D001825 ORTHO05D002336 2.4e-42 177.2 343 36.2
Duzib251G0237 Durio zibethinus HOM05D007389 ORTHO05D009400 4.3e-39 166.4 143 58.7
FAN12G3113 Fragaria x ananassa HOM05D007389 ORTHO05D009400 6.9e-37 159.1 133 57.9
QL01p044810 Quercus lobata HOM05D007389 ORTHO05D009400 5.1e-32 142.9 116 60.3
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 1.6e-30 137.9 198 41.9
BcaC06g33956 Brassica carinata HOM05D007389 ORTHO05D009400 4.8e-30 136.3 363 32.5
BolC7t44001H Brassica oleracea HOM05D001825 ORTHO05D002336 2.2e-27 127.5 314 33.8
PSO782G3111 Papaver somniferum HOM05D007389 ORTHO05D009400 8.4e-27 125.6 174 42.5
Nitab4.5_0000280g0130 Nicotiana tabacum HOM05D007389 ORTHO05D009400 3.2e-26 123.6 147 47.6
C07p34700 Brassica napus HOM05D001825 ORTHO05D002336 4.2e-26 123.2 305 33.8
Lalb_Chr04g0254881 Lupinus albus HOM05D007389 ORTHO05D009400 1.1e-23 115.2 116 47.4
MCO11G211 Micromonas commoda HOM05D007389 ORTHO05D009400 1.1e-21 108.6 430 24.4
TAR573G0003 Trochodendron aralioides HOM05D007389 ORTHO05D009400 5.8e-20 102.8 116 48.3
SalBow8G3870 Salvia bowleyana HOM05D007389 ORTHO05D009400 2.9e-19 100.5 99 52.5
TAR629G0747 Trochodendron aralioides HOM05D007389 ORTHO05D009400 1.9e-18 97.8 151 41.7
Cre09.g393580 Chlamydomonas reinhardtii HOM05D007389 ORTHO05D143270 1.8e-08 64.7 219 28.8


User provided reference genes

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