Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014501 Sechium edule HOM05D007039 ORTHO05D008886 1.1e-141 506.5 250 100.0
MELO3C019894.2 Cucumis melo HOM05D007039 ORTHO05D008886 1.0e-121 440.3 247 85.0
ClCG08G008260 Citrullus lanatus HOM05D007039 ORTHO05D008886 9.8e-117 423.7 282 74.8
CANSAT56G1368 Cannabis sativa HOM05D007039 ORTHO05D008886 3.0e-97 359.0 233 72.1
HanXRQChr08g0217501 Helianthus annuus HOM05D007039 ORTHO05D008886 6.2e-95 351.3 243 69.5
Cc02_g09650 Coffea canephora HOM05D007039 ORTHO05D008886 1.1e-94 350.5 248 68.5
Rhsim09G0142000 Rhododendron simsii HOM05D007039 ORTHO05D008886 1.1e-94 350.5 247 68.8
Eucgr.J00258 Eucalyptus grandis HOM05D007039 ORTHO05D008886 1.4e-94 350.1 240 71.2
GSVIVG01001001001 Vitis vinifera HOM05D007039 ORTHO05D008886 8.9e-94 347.4 247 67.2
CiPaw.14G032800 Carya illinoinensis HOM05D007039 ORTHO05D008886 3.4e-93 345.5 247 68.0
Oeu025598.1 Olea europaea HOM05D007039 ORTHO05D008886 1.7e-92 343.2 247 67.6
CAN.G186.55 Capsicum annuum HOM05D007039 ORTHO05D008886 2.9e-92 342.4 240 67.9
Lj2A32T31 Lonicera japonica HOM05D007039 ORTHO05D008886 3.8e-92 342.0 240 68.8
MD02G1261300 Malus domestica HOM05D007039 ORTHO05D008886 3.8e-92 342.0 240 68.3
PGSC0003DMG400016998 Solanum tuberosum HOM05D007039 ORTHO05D008886 3.8e-92 342.0 240 68.3
Prupe.2G067300 Prunus persica HOM05D007039 ORTHO05D008886 8.4e-92 340.9 240 69.2
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 1.4e-91 340.1 244 66.0
Sopen04g004820 Solanum pennellii HOM05D007039 ORTHO05D008886 3.2e-91 339.0 240 67.5
Migut.F00878 Erythranthe guttata HOM05D007039 ORTHO05D008886 9.2e-91 337.4 238 70.6
Solyc04g009700.3 Solanum lycopersicum HOM05D007039 ORTHO05D008886 1.6e-90 336.7 240 66.7
TWI63G1767 Tripterygium wilfordii HOM05D007039 ORTHO05D008886 2.1e-90 336.3 239 67.4
Sabra10G0186900 Salix brachista HOM05D007039 ORTHO05D008886 4.6e-90 335.1 244 66.4
CSS0047124 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.7e-89 333.2 237 67.1
Oeu036842.1 Olea europaea HOM05D007039 ORTHO05D008886 1.7e-89 333.2 242 66.1
RcHm_v2.0_Chr1g0331721 Rosa chinensis HOM05D007039 ORTHO05D008886 1.7e-89 333.2 238 68.5
AUR62041513 Chenopodium quinoa HOM05D007039 ORTHO05D008886 2.3e-89 332.8 244 64.3
Dinv11837 Davidia involucrata HOM05D007039 ORTHO05D008886 3.9e-89 332.0 237 67.9
arahy.Tifrunner.gnm1.ann1.XC1RGZ Arachis hypogaea HOM05D007039 ORTHO05D008886 5.1e-89 331.6 241 66.0
PSO339G1176 Papaver somniferum HOM05D007039 ORTHO05D008886 5.1e-89 331.6 242 66.9
SalBow6G1307 Salvia bowleyana HOM05D007039 ORTHO05D008886 5.1e-89 331.6 241 68.0
PSO384G1372 Papaver somniferum HOM05D007039 ORTHO05D008886 6.6e-89 331.3 242 66.5
Potri.010G238700 Populus trichocarpa HOM05D007039 ORTHO05D008886 8.6e-89 330.9 247 65.6
TAR623G0720 Trochodendron aralioides HOM05D007039 ORTHO05D008886 8.6e-89 330.9 247 66.4
CSS0023700 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.1e-88 330.5 244 65.2
Lsat_1_v5_gn_8_24101 Lactuca sativa HOM05D007039 ORTHO05D008886 1.1e-88 330.5 243 65.0
TPR.G2471 Trifolium pratense HOM05D007039 ORTHO05D008886 1.5e-88 330.1 243 65.0
arahy.Tifrunner.gnm1.ann1.2NV5LW Arachis hypogaea HOM05D007039 ORTHO05D008886 3.3e-88 328.9 241 65.6
Ciclev10016452m.g Citrus clementina HOM05D007039 ORTHO05D008886 4.3e-88 328.6 242 64.5
CsaV3_6G004220 Cucumis sativus L. HOM05D007039 ORTHO05D008886 7.3e-88 327.8 183 84.2
QL04p044873 Quercus lobata HOM05D007039 ORTHO05D008886 9.6e-88 327.4 242 65.3
vmacro10308 Vaccinium macrocarpon HOM05D007039 ORTHO05D008886 9.6e-88 327.4 293 57.3
SGA_v2.0_scaffold62G21336 Striga asiatica HOM05D007039 ORTHO05D008886 2.1e-87 326.2 244 66.0
Manes.07G087400 Manihot esculenta HOM05D007039 ORTHO05D008886 4.7e-87 325.1 238 65.5
Aqoxy2G01207 Aquilegia oxysepala HOM05D007039 ORTHO05D008886 6.2e-87 324.7 244 65.6
Sc20g0001160 Simmondsia chinensis HOM05D007039 ORTHO05D008886 8.1e-87 324.3 248 64.1
Thecc.07G140700 Theobroma cacao HOM05D007039 ORTHO05D008886 8.1e-87 324.3 239 64.4
Ah.06g186600 Amaranthus hybridus HOM05D007039 ORTHO05D008886 1.1e-86 323.9 244 65.6
Ca_25665_v3 Cicer arietinum L. HOM05D007039 ORTHO05D008886 1.1e-86 323.9 241 65.1
AUR62042080 Chenopodium quinoa HOM05D007039 ORTHO05D008886 1.4e-86 323.6 229 65.5
Lalb_Chr06g0166411 Lupinus albus HOM05D007039 ORTHO05D008886 3.1e-86 322.4 240 65.4
FAN06G3803 Fragaria x ananassa HOM05D007039 ORTHO05D008886 6.9e-86 321.2 237 65.4
THA.LOC104801579 Tarenaya hassleriana HOM05D007039 ORTHO05D008886 8.9e-86 320.9 238 62.2
Medtr1g112080 Medicago truncatula HOM05D007039 ORTHO05D008886 1.5e-85 320.1 243 63.4
FAN01G2006 Fragaria x ananassa HOM05D007039 ORTHO05D008886 4.4e-85 318.5 237 65.4
Hund22275 Selenicereus undatus HOM05D007039 ORTHO05D008886 4.4e-85 318.5 247 61.1
Atru.chr12.1023 Acer truncatum HOM05D007039 ORTHO05D008886 7.6e-85 317.8 249 60.2
FAN03G1588 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.7e-84 316.6 237 64.6
MD07G1059500 Malus domestica HOM05D007039 ORTHO05D008886 2.2e-84 316.2 240 63.3
Potri.008G020500 Populus trichocarpa HOM05D007039 ORTHO05D008886 2.2e-84 316.2 247 63.6
Phvul.007G022300 Phaseolus vulgaris HOM05D007039 ORTHO05D008886 2.9e-84 315.8 241 62.7
Psat6g231000 Pisum sativum HOM05D007039 ORTHO05D008886 2.9e-84 315.8 243 64.2
EL10Ac4g08687 Beta vulgaris HOM05D007039 ORTHO05D008886 6.4e-84 314.7 244 63.1
Glyma.20G110700 Glycine max HOM05D007039 ORTHO05D008886 1.1e-83 313.9 241 62.2
Nn6g34917 Nelumbo nucifera HOM05D007039 ORTHO05D008886 9.3e-83 310.8 249 64.3
Duzib106G1061 Durio zibethinus HOM05D007039 ORTHO05D008886 1.2e-82 310.5 246 61.0
VMungo0720G0617 Vigna mungo HOM05D007039 ORTHO05D008886 2.7e-82 309.3 241 60.6
FAN10G1571 Fragaria x ananassa HOM05D007039 ORTHO05D008886 3.5e-82 308.9 251 62.2
Lj5g0024269 Lotus japonicus HOM05D007039 ORTHO05D008886 3.5e-82 308.9 237 62.9
COL.COLO4_17444 Corchorus olitorius HOM05D007039 ORTHO05D008886 4.6e-82 308.5 239 61.5
Gohir.D06G182700 Gossypium hirsutum HOM05D007039 ORTHO05D008886 6.0e-82 308.1 244 59.4
Gorai.010G214000 Gossypium raimondii HOM05D007039 ORTHO05D008886 1.0e-81 307.4 244 59.4
HPP92_006806 Vanilla planifolia HOM05D007039 ORTHO05D008886 2.3e-81 306.2 233 62.7
Gohir.A06G173100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 6.6e-81 304.7 244 58.2
Gohir.D06G183000 Gossypium hirsutum HOM05D007039 ORTHO05D008886 6.6e-81 304.7 244 58.2
Gorai.010G214100 Gossypium raimondii HOM05D007039 ORTHO05D008886 1.1e-80 303.9 244 58.6
Nitab4.5_0003927g0060 Nicotiana tabacum HOM05D007039 ORTHO05D008886 2.5e-80 302.8 243 63.0
Gohir.D06G183100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 3.3e-80 302.4 244 58.6
unitig_748.g8774 Utricularia gibba HOM05D007039 ORTHO05D008886 9.6e-80 300.8 245 59.6
Os01g0859400 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 4.8e-79 298.5 244 58.6
TAR633G1803 Trochodendron aralioides HOM05D007039 ORTHO05D008886 1.4e-78 297.0 239 59.8
Zm00001eb366890 Zea mays HOM05D007039 ORTHO05D008886 1.4e-78 297.0 244 58.2
Zm00001eb147230 Zea mays HOM05D007039 ORTHO05D008886 3.1e-78 295.8 238 59.7
Peaxi162Scf00195g01020 Petunia axillaris HOM05D007039 ORTHO05D008886 3.4e-77 292.4 243 60.5
ECA233G2799 Erigeron canadensis HOM05D007039 ORTHO05D008886 6.9e-70 268.1 189 65.6
Cpa.g.sc56.15 Carica papaya HOM05D007039 ORTHO05D008886 9.0e-70 267.7 192 64.6
HPP92_009768 Vanilla planifolia HOM05D007039 ORTHO05D008886 2.6e-69 266.2 231 55.0
HPP92_009745 Vanilla planifolia HOM05D007039 ORTHO05D008886 1.7e-68 263.5 231 54.5
Dinv09617 Davidia involucrata HOM05D007039 ORTHO05D008886 1.1e-67 260.8 247 57.1
Zm00001eb092690 Zea mays HOM05D007039 ORTHO05D008886 4.3e-64 248.8 238 50.4
PGSC0003DMG400023289 Solanum tuberosum HOM05D007039 ORTHO05D008886 9.6e-64 247.7 183 63.4
MSTRG.9060 Avicennia marina HOM05D007039 ORTHO05D008886 6.2e-63 245.0 182 63.2
Oeu036841.1 Olea europaea HOM05D007039 ORTHO05D008886 4.0e-62 242.3 182 62.6
Os12g0152800 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 6.9e-62 241.5 239 50.6
Glyma.10G279000 Glycine max HOM05D007039 ORTHO05D008886 4.5e-61 238.8 237 52.7
Mapoly0010s0050 Marchantia polymorpha HOM05D007039 ORTHO05D008886 1.3e-60 237.3 227 50.2
Eucgr.J00257 Eucalyptus grandis HOM05D007039 ORTHO05D008886 2.2e-60 236.5 182 63.7
FvH4_7g05130 Fragaria vesca HOM05D007039 ORTHO05D008886 1.1e-59 234.2 179 62.0
PGR142G0235 Punica granatum HOM05D007039 ORTHO05D008886 3.2e-59 232.6 178 62.9
CSS0008887 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.6e-55 220.3 184 59.2
SMO367G0592 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 4.1e-54 215.7 247 46.2
AagrBONN_evm.TU.Sc2ySwM_362.1562 Anthoceros agrestis HOM05D007039 ORTHO05D008886 1.0e-52 211.1 231 44.2
CBR_g32363 Chara braunii HOM05D007039 ORTHO05D008886 3.2e-51 206.1 205 49.8
Pp3c15_5790 Physcomitrium patens HOM05D007039 ORTHO05D008886 1.0e-49 201.1 229 44.5
CDE08G0883 Ceratophyllum demersum HOM05D007039 ORTHO05D008886 7.4e-48 194.9 147 59.9
CSS0041399 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 2.2e-47 193.4 175 57.1
AagrBONN_evm.TU.Sc2ySwM_228.3073 Anthoceros agrestis HOM05D007039 ORTHO05D008886 2.8e-47 193.0 214 43.9
Zm00001eb197030 Zea mays HOM05D007039 ORTHO05D008886 5.5e-43 178.7 178 45.5
DCAR_019005 Daucus carota HOM05D007039 ORTHO05D008886 6.1e-42 175.3 109 66.1
SMO353G0277 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 4.7e-34 149.1 180 43.9
Cre01.g018100 Chlamydomonas reinhardtii HOM05D007039 ORTHO05D008886 2.4e-30 136.7 208 35.1
Nitab4.5_0000691g0070 Nicotiana tabacum HOM05D007039 ORTHO05D008886 4.1e-30 136.0 242 39.7
MD04G1248500 Malus domestica HOM05D007039 ORTHO05D008886 1.3e-23 114.4 105 55.2
PRCOL_00002076 Prasinoderma coloniale HOM05D007039 ORTHO05D008886 2.1e-18 97.1 263 24.3


User provided reference genes

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