Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014495 Sechium edule HOM05D004438 ORTHO05D005256 3.9e-69 264.6 127 100.0
Sed0003177 Sechium edule HOM05D004438 ORTHO05D005256 1.8e-66 255.8 127 95.3
ClCG01G016040 Citrullus lanatus HOM05D004438 ORTHO05D005256 3.4e-65 251.5 127 93.7
MELO3C007474.2 Cucumis melo HOM05D004438 ORTHO05D005256 4.4e-65 251.1 127 92.9
CsaV3_6G042320 Cucumis sativus L. HOM05D004438 ORTHO05D005256 2.9e-64 248.4 127 92.1
CiPaw.03G133700 Carya illinoinensis HOM05D004438 ORTHO05D005256 5.4e-63 244.2 127 89.0
Oeu027202.1 Olea europaea HOM05D004438 ORTHO05D005256 1.2e-62 243.0 127 89.0
Duzib187G1770 Durio zibethinus HOM05D004438 ORTHO05D005256 7.8e-62 240.4 127 86.6
QL06p031963 Quercus lobata HOM05D004438 ORTHO05D005256 1.0e-61 240.0 126 87.3
Actinidia06107 Actinidia chinensis HOM05D004438 ORTHO05D005256 1.3e-61 239.6 127 87.4
Dinv42684 Davidia involucrata HOM05D004438 ORTHO05D005256 1.3e-61 239.6 127 88.2
Gohir.A11G197600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.3e-61 239.6 127 85.8
PGSC0003DMG400031197 Solanum tuberosum HOM05D004438 ORTHO05D005256 2.3e-61 238.8 127 86.6
Ah.02g126620 Amaranthus hybridus HOM05D004438 ORTHO05D005256 3.0e-61 238.4 127 86.6
Gorai.007G245000 Gossypium raimondii HOM05D004438 ORTHO05D005256 3.0e-61 238.4 127 85.0
Peaxi162Scf00106g00162 Petunia axillaris HOM05D004438 ORTHO05D005256 3.0e-61 238.4 127 86.6
CSS0020413 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 5.1e-61 237.7 127 86.6
Solyc04g051710.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 5.1e-61 237.7 127 85.8
TWI53G0984 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 6.6e-61 237.3 127 85.8
Sopen04g023090 Solanum pennellii HOM05D004438 ORTHO05D005256 8.6e-61 236.9 123 87.0
SGA_v2.0_scaffold79G25619 Striga asiatica HOM05D004438 ORTHO05D005256 8.6e-61 236.9 127 85.0
Cpa.g.sc21.8 Carica papaya HOM05D004438 ORTHO05D005256 1.1e-60 236.5 125 86.4
COL.COLO4_11000 Corchorus olitorius HOM05D004438 ORTHO05D005256 1.5e-60 236.1 127 85.0
Haze_25054 Corylus avellana HOM05D004438 ORTHO05D005256 3.3e-60 235.0 126 84.9
Gohir.A10G084200 Gossypium hirsutum HOM05D004438 ORTHO05D005256 3.3e-60 235.0 125 84.8
Gorai.011G114100 Gossypium raimondii HOM05D004438 ORTHO05D005256 4.3e-60 234.6 125 84.0
Thecc.01G114400 Theobroma cacao HOM05D004438 ORTHO05D005256 4.3e-60 234.6 127 85.0
MSTRG.9937 Avicennia marina HOM05D004438 ORTHO05D005256 7.3e-60 233.8 127 85.0
Gohir.D11G231900 Gossypium hirsutum HOM05D004438 ORTHO05D005256 7.3e-60 233.8 127 84.3
QL01p009111 Quercus lobata HOM05D004438 ORTHO05D005256 7.3e-60 233.8 125 86.4
Ah.03g137490 Amaranthus hybridus HOM05D004438 ORTHO05D005256 9.5e-60 233.4 127 83.5
Cfa002762 Carpinus fangiana HOM05D004438 ORTHO05D005256 9.5e-60 233.4 125 84.8
Rhsim10G0149000 Rhododendron simsii HOM05D004438 ORTHO05D005256 9.5e-60 233.4 123 87.0
Gohir.D10G104600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.2e-59 233.0 125 83.2
TWI74G1039 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 1.6e-59 232.6 127 85.0
Dinv19477 Davidia involucrata HOM05D004438 ORTHO05D005256 2.1e-59 232.3 126 86.5
Migut.N00230 Erythranthe guttata HOM05D004438 ORTHO05D005256 2.1e-59 232.3 127 85.0
AUR62027160 Chenopodium quinoa HOM05D004438 ORTHO05D005256 2.8e-59 231.9 121 88.4
AUR62044399 Chenopodium quinoa HOM05D004438 ORTHO05D005256 2.8e-59 231.9 121 88.4
Gohir.A11G053800 Gossypium hirsutum HOM05D004438 ORTHO05D005256 2.8e-59 231.9 125 82.4
MBI11_g03707_MAGBIO Magnolia biondii HOM05D004438 ORTHO05D005256 4.7e-59 231.1 126 81.7
PSO541G1989 Papaver somniferum HOM05D004438 ORTHO05D005256 4.7e-59 231.1 127 82.7
Phvul.L002244 Phaseolus vulgaris HOM05D004438 ORTHO05D005256 8.1e-59 230.3 125 81.6
TAR625G0091 Trochodendron aralioides HOM05D004438 ORTHO05D005256 8.1e-59 230.3 127 83.5
VMungo0720G0202 Vigna mungo HOM05D004438 ORTHO05D005256 8.1e-59 230.3 125 81.6
AT5G64816 Arabidopsis thaliana HOM05D004438 ORTHO05D005256 1.1e-58 229.9 126 81.0
CAN.G344.10 Capsicum annuum HOM05D004438 ORTHO05D005256 1.4e-58 229.6 127 83.5
Gohir.D11G057300 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.4e-58 229.6 125 80.8
SGA_v2.0_scaffold308G48110 Striga asiatica HOM05D004438 ORTHO05D005256 2.4e-58 228.8 127 81.9
AL8G42290 Arabidopsis lyrata HOM05D004438 ORTHO05D005256 3.1e-58 228.4 125 80.8
CANSAT01G2942 Cannabis sativa HOM05D004438 ORTHO05D005256 4.0e-58 228.0 123 85.4
MD03G1238400 Malus domestica HOM05D004438 ORTHO05D005256 4.0e-58 228.0 125 84.0
PSO675G7198 Papaver somniferum HOM05D004438 ORTHO05D005256 4.0e-58 228.0 127 81.9
THA.LOC104799304 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 5.2e-58 227.6 125 81.6
TAR625G0287 Trochodendron aralioides HOM05D004438 ORTHO05D005256 1.2e-57 226.5 126 81.0
vmacro18638 Vaccinium macrocarpon HOM05D004438 ORTHO05D005256 1.2e-57 226.5 127 82.7
Carub.0008s2564 Capsella rubella HOM05D004438 ORTHO05D005256 2.6e-57 225.3 126 80.2
RcHm_v2.0_Chr2g0117091 Rosa chinensis HOM05D004438 ORTHO05D005256 2.6e-57 225.3 127 82.7
TAR381G0625 Trochodendron aralioides HOM05D004438 ORTHO05D005256 2.6e-57 225.3 127 81.9
FvH4_1g22770 Fragaria vesca HOM05D004438 ORTHO05D005256 3.4e-57 224.9 127 82.7
FAN19G1036 Fragaria x ananassa HOM05D004438 ORTHO05D005256 3.4e-57 224.9 127 82.7
FAN23G1009 Fragaria x ananassa HOM05D004438 ORTHO05D005256 3.4e-57 224.9 127 82.7
FAN26G1829 Fragaria x ananassa HOM05D004438 ORTHO05D005256 3.4e-57 224.9 127 82.7
FAN28G0942 Fragaria x ananassa HOM05D004438 ORTHO05D005256 3.4e-57 224.9 127 82.7
Nitab4.5_0000184g0290 Nicotiana tabacum HOM05D004438 ORTHO05D005256 3.4e-57 224.9 115 89.6
SalBow3G3218 Salvia bowleyana HOM05D004438 ORTHO05D005256 3.4e-57 224.9 123 82.1
CARHR278820 Cardamine hirsuta HOM05D004438 ORTHO05D005256 7.6e-57 223.8 126 79.4
Nitab4.5_0000131g0360 Nicotiana tabacum HOM05D004438 ORTHO05D005256 7.6e-57 223.8 123 81.3
Nitab4.5_0003709g0100 Nicotiana tabacum HOM05D004438 ORTHO05D005256 7.6e-57 223.8 123 81.3
Lalb_Chr02g0150651 Lupinus albus HOM05D004438 ORTHO05D005256 9.9e-57 223.4 125 79.2
MD15G1340400 Malus domestica HOM05D004438 ORTHO05D005256 9.9e-57 223.4 123 83.7
Prupe.4G171500 Prunus persica HOM05D004438 ORTHO05D005256 1.3e-56 223.0 125 83.2
Aqoxy2G01099 Aquilegia oxysepala HOM05D004438 ORTHO05D005256 1.7e-56 222.6 127 80.3
Glyma.01G200000 Glycine max HOM05D004438 ORTHO05D005256 1.7e-56 222.6 126 77.8
TPR.G28848 Trifolium pratense HOM05D004438 ORTHO05D005256 1.7e-56 222.6 125 80.0
Peaxi162Scf00979g00008 Petunia axillaris HOM05D004438 ORTHO05D005256 2.9e-56 221.9 123 80.5
Prupe.6G170300 Prunus persica HOM05D004438 ORTHO05D005256 2.9e-56 221.9 127 81.9
Glyma.10G190000 Glycine max HOM05D004438 ORTHO05D005256 4.9e-56 221.1 126 77.8
Glyma.20G200800 Glycine max HOM05D004438 ORTHO05D005256 4.9e-56 221.1 128 77.3
Medtr1g073620 Medicago truncatula HOM05D004438 ORTHO05D005256 4.9e-56 221.1 127 77.2
A06p31610 Brassica napus HOM05D004438 ORTHO05D005256 6.4e-56 220.7 126 78.6
Os03g0185600 Oryza sativa ssp. japonica HOM05D004438 ORTHO05D005256 8.4e-56 220.3 123 79.7
Thhalv10005124m.g Eutrema salsugineum HOM05D004438 ORTHO05D005256 1.1e-55 219.9 128 78.9
MD15G1331400 Malus domestica HOM05D004438 ORTHO05D005256 1.1e-55 219.9 125 81.6
HPP92_015825 Vanilla planifolia HOM05D004438 ORTHO05D005256 1.4e-55 219.5 126 79.4
C03p61350 Brassica napus HOM05D004438 ORTHO05D005256 1.9e-55 219.2 125 78.4
BraA06t26098Z Brassica rapa HOM05D004438 ORTHO05D005256 1.9e-55 219.2 125 78.4
Lj5g0016992 Lotus japonicus HOM05D004438 ORTHO05D005256 1.9e-55 219.2 125 77.6
BcaB02g09832 Brassica carinata HOM05D004438 ORTHO05D005256 2.4e-55 218.8 126 77.8
BcaC01g02715 Brassica carinata HOM05D004438 ORTHO05D005256 2.4e-55 218.8 126 77.8
BolC3t18395H Brassica oleracea HOM05D004438 ORTHO05D005256 2.4e-55 218.8 126 77.8
Eucgr.F02140 Eucalyptus grandis HOM05D004438 ORTHO05D005256 2.4e-55 218.8 123 78.9
Sp2g27890 Schrenkiella parvula HOM05D004438 ORTHO05D005256 2.4e-55 218.8 126 77.8
Cc10_g15830 Coffea canephora HOM05D004438 ORTHO05D005256 4.1e-55 218.0 123 78.9
Sopen00g011470 Solanum pennellii HOM05D004438 ORTHO05D005256 4.1e-55 218.0 123 78.9
Zm00001eb006400 Zea mays HOM05D004438 ORTHO05D005256 5.4e-55 217.6 123 78.9
DCAR_009568 Daucus carota HOM05D004438 ORTHO05D005256 7.1e-55 217.2 126 76.2
THA.LOC104819312 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 7.1e-55 217.2 126 77.8
GSVIVG01009169001 Vitis vinifera HOM05D004438 ORTHO05D005256 7.1e-55 217.2 123 80.5
Psat6g129880 Pisum sativum HOM05D004438 ORTHO05D005256 9.2e-55 216.9 122 77.0
CAN.G475.35 Capsicum annuum HOM05D004438 ORTHO05D005256 1.2e-54 216.5 123 79.7
Sc03g0004400 Simmondsia chinensis HOM05D004438 ORTHO05D005256 1.2e-54 216.5 115 84.3
Nn5g29898 Nelumbo nucifera HOM05D004438 ORTHO05D005256 1.6e-54 216.1 126 79.4
unitig_699.g19132 Utricularia gibba HOM05D004438 ORTHO05D005256 1.6e-54 216.1 125 77.6
RcHm_v2.0_Chr5g0031621 Rosa chinensis HOM05D000965 ORTHO05D000842 2.1e-54 215.7 127 78.0
Potri.002G105400 Populus trichocarpa HOM05D004438 ORTHO05D005256 2.7e-54 215.3 126 76.2
Potri.005G156400 Populus trichocarpa HOM05D004438 ORTHO05D005256 2.7e-54 215.3 123 78.0
SalBow2G1806 Salvia bowleyana HOM05D004438 ORTHO05D005256 2.7e-54 215.3 125 78.4
Solyc04g076260.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 2.7e-54 215.3 123 78.0
Zm00001eb401580 Zea mays HOM05D004438 ORTHO05D005256 2.7e-54 215.3 123 78.0
DCAR_009565 Daucus carota HOM05D004438 ORTHO05D005256 4.6e-54 214.5 126 75.4
Lsat_1_v5_gn_8_150501 Lactuca sativa HOM05D004438 ORTHO05D005256 7.8e-54 213.8 121 80.2
Aa31LG1G17110 Aethionema arabicum HOM05D004438 ORTHO05D005256 1.7e-53 212.6 128 76.6
Ciclev10002841m.g Citrus clementina HOM05D004438 ORTHO05D005256 1.7e-53 212.6 123 77.2
HanXRQChr12g0372061 Helianthus annuus HOM05D004438 ORTHO05D005256 1.7e-53 212.6 123 78.9
Psat7g208520 Pisum sativum HOM05D004438 ORTHO05D005256 1.7e-53 212.6 125 76.0
ECA233G2293 Erigeron canadensis HOM05D004438 ORTHO05D005256 3.9e-53 211.5 123 78.9
Atru.chr13.1020 Acer truncatum HOM05D004438 ORTHO05D005256 5.1e-53 211.1 123 76.4
PGSC0003DMG400009364 Solanum tuberosum HOM05D004438 ORTHO05D005256 5.1e-53 211.1 123 76.4
Nitab4.5_0004977g0040 Nicotiana tabacum HOM05D004438 ORTHO05D005256 1.9e-52 209.1 107 89.7
Sc23g0000680 Simmondsia chinensis HOM05D004438 ORTHO05D005256 4.3e-52 208.0 125 77.6
Manes.10G131700 Manihot esculenta HOM05D004438 ORTHO05D005256 7.3e-52 207.2 123 76.4
EL10Ac6g13106 Beta vulgaris HOM05D004438 ORTHO05D005256 3.6e-51 204.9 107 87.9
Gorai.007G062500 Gossypium raimondii HOM05D004438 ORTHO05D005256 3.6e-51 204.9 125 75.2
Lalb_Chr21g0312471 Lupinus albus HOM05D004438 ORTHO05D005256 3.1e-50 201.8 118 76.3
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 2.6e-49 198.7 112 81.2
Manes.02G145100 Manihot esculenta HOM05D004438 ORTHO05D005256 4.4e-49 198.0 110 82.7
FvH4_3g18771 Fragaria vesca HOM05D004438 ORTHO05D005256 7.6e-49 197.2 115 80.0
Sabra02G0082700 Salix brachista HOM05D004438 ORTHO05D005256 1.3e-48 196.4 112 77.7
ATR1132G028 Amborella trichopoda HOM05D004438 ORTHO05D005256 8.4e-48 193.7 126 72.2
Sabra05G0119900 Salix brachista HOM05D004438 ORTHO05D005256 1.1e-47 193.4 112 76.8
Nn1g08461 Nelumbo nucifera HOM05D004438 ORTHO05D005256 1.9e-47 192.6 103 85.4
Duzib264G0014 Durio zibethinus HOM05D004438 ORTHO05D005256 3.2e-47 191.8 101 87.1
FAN16G1755 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.6e-46 189.5 111 79.3
Migut.G00404 Erythranthe guttata HOM05D004438 ORTHO05D005256 7.8e-46 187.2 134 69.4
TWI56G0149 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 1.0e-45 186.8 124 71.8
SHI31196 Sapria himalayana HOM05D004438 ORTHO05D005256 1.6e-43 179.5 124 62.1
Oeu028520.2 Olea europaea HOM05D004438 ORTHO05D005256 1.1e-42 176.8 102 83.3
FAN21G3234 Fragaria x ananassa HOM05D000965 ORTHO05D000842 3.1e-42 175.3 98 79.6
Nitab4.5_0004977g0030 Nicotiana tabacum HOM05D004438 ORTHO05D005256 4.0e-42 174.9 89 89.9
FAN11G0727 Fragaria x ananassa HOM05D000965 ORTHO05D000842 6.9e-42 174.1 98 79.6
CSS0036861 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 7.6e-41 170.6 98 82.7
Mapoly0031s0095 Marchantia polymorpha HOM05D004438 ORTHO05D005256 2.2e-40 169.1 120 65.0
COL.COLO4_35234 Corchorus olitorius HOM05D004438 ORTHO05D005256 1.1e-39 166.8 134 64.9
AagrBONN_evm.TU.Sc2ySwM_117.295 Anthoceros agrestis HOM05D004438 ORTHO05D005256 1.9e-39 166.0 124 59.7
Pp3c22_12110 Physcomitrium patens HOM05D004438 ORTHO05D005256 2.4e-39 165.6 127 59.8
SEGI_36857 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 5.4e-39 164.5 88 81.8
Rhsim08G0005900 Rhododendron simsii HOM05D004438 ORTHO05D005256 3.5e-38 161.8 102 74.5
SEGI_35678 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 2.6e-33 145.6 129 57.4
Gohir.1Z049407 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.3e-32 143.3 69 91.3
Pp3c19_18370 Physcomitrium patens HOM05D004438 ORTHO05D005256 3.8e-32 141.7 120 54.2
AagrBONN_evm.TU.Sc2ySwM_344.1988 Anthoceros agrestis HOM05D004438 ORTHO05D005256 8.7e-29 130.6 124 53.2
CSS0034319 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 2.1e-27 125.9 114 57.0
arahy.Tifrunner.gnm1.ann1.7JV24P Arachis hypogaea HOM05D004438 ORTHO05D005256 1.8e-26 122.9 57 93.0
CSS0009061 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 6.9e-26 120.9 108 55.6
CiPaw.04G091100 Carya illinoinensis HOM05D004438 ORTHO05D005256 2.5e-23 112.5 62 80.6
PRCOL_00001176 Prasinoderma coloniale HOM05D004438 ORTHO05D005256 5.5e-23 111.3 74 60.8
ATR0049G041 Amborella trichopoda HOM05D004438 ORTHO05D005256 1.3e-21 106.7 129 44.2
Cre07.g313800 Chlamydomonas reinhardtii HOM05D004438 ORTHO05D005256 1.1e-20 103.6 79 55.7
MCO08G336 Micromonas commoda HOM05D004438 ORTHO05D005256 2.5e-20 102.4 95 48.4
CSS0036545 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 6.5e-16 87.8 47 85.1
Hund21738 Selenicereus undatus HOM05D004438 ORTHO05D005256 7.4e-12 74.3 35 94.3
CBR_g51299 Chara braunii HOM05D004438 ORTHO05D005256 1.3e-08 63.5 35 77.1
SalBow2G3602 Salvia bowleyana HOM05D004438 ORTHO05D005256 1.7e-08 63.2 32 81.2
SalBow1G8643 Salvia bowleyana HOM05D000379 ORTHO05D000254 1.9e-07 59.7 32 78.1


User provided reference genes

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