Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014483 Sechium edule HOM05D006276 ORTHO05D007724 1.3e-179 632.9 313 100.0
ClCG08G017020 Citrullus lanatus HOM05D006276 ORTHO05D007724 5.3e-152 541.2 316 85.8
Sed0008348 Sechium edule HOM05D006276 ORTHO05D007724 1.2e-148 530.0 313 84.0
CsaV3_2G025580 Cucumis sativus L. HOM05D006276 ORTHO05D007724 1.3e-147 526.6 316 82.6
MELO3C010755.2 Cucumis melo HOM05D006276 ORTHO05D007724 1.8e-120 436.4 322 72.4
Ciclev10008931m.g Citrus clementina HOM05D006276 ORTHO05D007724 5.7e-106 388.3 322 59.3
GSVIVG01035412001 Vitis vinifera HOM05D006276 ORTHO05D007724 4.8e-105 385.2 322 59.9
CiPaw.16G028900 Carya illinoinensis HOM05D006276 ORTHO05D007724 6.3e-105 384.8 315 60.6
RcHm_v2.0_Chr6g0290791 Rosa chinensis HOM05D006276 ORTHO05D007724 1.4e-104 383.6 318 60.1
Atru.chr7.1056 Acer truncatum HOM05D006276 ORTHO05D007724 5.3e-104 381.7 319 60.5
QL02p001268 Quercus lobata HOM05D006276 ORTHO05D007724 7.0e-104 381.3 315 59.7
RcHm_v2.0_Chr6g0310851 Rosa chinensis HOM05D006276 ORTHO05D007724 1.2e-103 380.6 318 60.1
Duzib168G0463 Durio zibethinus HOM05D006276 ORTHO05D007724 1.0e-102 377.5 319 58.6
TAR626G0576 Trochodendron aralioides HOM05D006276 ORTHO05D007724 3.8e-102 375.6 322 58.1
Dinv27981 Davidia involucrata HOM05D006276 ORTHO05D007724 2.5e-101 372.9 322 58.7
arahy.Tifrunner.gnm1.ann1.C6FL8N Arachis hypogaea HOM05D006276 ORTHO05D007724 3.2e-101 372.5 315 57.5
TAR383G0425 Trochodendron aralioides HOM05D006276 ORTHO05D007724 1.2e-100 370.5 322 60.2
arahy.Tifrunner.gnm1.ann1.PS3ZFP Arachis hypogaea HOM05D006276 ORTHO05D007724 6.1e-100 368.2 316 57.6
Glyma.17G229400 Glycine max HOM05D006276 ORTHO05D007724 8.0e-100 367.9 319 57.1
Thecc.09G053300 Theobroma cacao HOM05D006276 ORTHO05D007724 1.0e-99 367.5 322 56.2
Manes.16G079900 Manihot esculenta HOM05D006276 ORTHO05D007724 1.4e-99 367.1 314 57.3
Potri.006G230000 Populus trichocarpa HOM05D006276 ORTHO05D007724 1.8e-99 366.7 314 58.6
Actinidia01190 Actinidia chinensis HOM05D006276 ORTHO05D007724 5.2e-99 365.2 321 57.9
Eucgr.C03044 Eucalyptus grandis HOM05D006276 ORTHO05D007724 2.0e-98 363.2 322 55.9
FvH4_2g31970 Fragaria vesca HOM05D006276 ORTHO05D007724 2.0e-98 363.2 318 57.9
Hma1.2p1_0482F.1_g162490 Hydrangea macrophylla HOM05D006276 ORTHO05D007724 2.6e-98 362.8 321 56.4
CANSAT25G3436 Cannabis sativa HOM05D006276 ORTHO05D007724 7.5e-98 361.3 320 58.1
Lalb_Chr14g0367711 Lupinus albus HOM05D006276 ORTHO05D007724 9.8e-98 360.9 321 56.4
Phvul.001G034700 Phaseolus vulgaris HOM05D006276 ORTHO05D007724 2.2e-97 359.8 320 56.9
Lj5g0000642 Lotus japonicus HOM05D006276 ORTHO05D007724 3.7e-97 359.0 317 57.1
Gorai.009G045400 Gossypium raimondii HOM05D006276 ORTHO05D007724 4.8e-97 358.6 323 57.0
MD15G1060500 Malus domestica HOM05D006276 ORTHO05D007724 6.3e-97 358.2 320 56.6
MD08G1060900 Malus domestica HOM05D006276 ORTHO05D007724 8.3e-97 357.8 316 57.9
VMungo0647G0182 Vigna mungo HOM05D006276 ORTHO05D007724 8.3e-97 357.8 320 55.6
Ca_13170_v3 Cicer arietinum L. HOM05D006276 ORTHO05D007724 9.1e-96 354.4 315 54.6
COL.COLO4_21052 Corchorus olitorius HOM05D006276 ORTHO05D007724 2.0e-95 353.2 322 57.8
Lj7A273T8 Lonicera japonica HOM05D006276 ORTHO05D007724 1.1e-93 347.4 321 57.0
Sabra06G0178200 Salix brachista HOM05D006276 ORTHO05D007724 1.1e-93 347.4 361 50.7
TPR.G13142 Trifolium pratense HOM05D006276 ORTHO05D007724 1.5e-93 347.1 314 54.1
TWI34G0536 Tripterygium wilfordii HOM05D006276 ORTHO05D007724 1.0e-91 340.9 313 54.3
Actinidia18190 Actinidia chinensis HOM05D006276 ORTHO05D007724 2.3e-91 339.7 317 55.5
DCAR_004430 Daucus carota HOM05D006276 ORTHO05D007724 2.6e-90 336.3 323 53.3
Peaxi162Scf00247g00720 Petunia axillaris HOM05D006276 ORTHO05D007724 7.5e-90 334.7 322 51.9
Rhsim07G0142500 Rhododendron simsii HOM05D006276 ORTHO05D007724 1.3e-89 334.0 322 54.7
THA.LOC104811244 Tarenaya hassleriana HOM05D006276 ORTHO05D007724 1.3e-89 334.0 317 52.4
Lsat_1_v5_gn_3_24381 Lactuca sativa HOM05D006276 ORTHO05D007724 6.3e-89 331.6 317 53.0
Haze_18196 Corylus avellana HOM05D006276 ORTHO05D007724 8.3e-89 331.3 317 54.9
PGSC0003DMG400025517 Solanum tuberosum HOM05D006276 ORTHO05D007724 8.3e-89 331.3 321 51.7
PSO210G3453 Papaver somniferum HOM05D006276 ORTHO05D007724 1.1e-88 330.9 322 54.7
Actinidia14712 Actinidia chinensis HOM05D006276 ORTHO05D007724 1.8e-88 330.1 317 54.6
Cc08_g10550 Coffea canephora HOM05D006276 ORTHO05D007724 2.4e-88 329.7 319 53.6
Medtr1g016410 Medicago truncatula HOM05D006276 ORTHO05D007724 2.4e-88 329.7 319 50.8
PSO210G2260 Papaver somniferum HOM05D006276 ORTHO05D007724 2.0e-87 326.6 320 53.8
Sopen11g028700 Solanum pennellii HOM05D006276 ORTHO05D007724 2.0e-87 326.6 321 50.5
FAN24G2654 Fragaria x ananassa HOM05D006276 ORTHO05D007724 2.7e-87 326.2 393 46.8
Aqoxy5G01259 Aquilegia oxysepala HOM05D006276 ORTHO05D007724 3.5e-87 325.9 321 53.6
HanXRQChr17g0538201 Helianthus annuus HOM05D006276 ORTHO05D007724 5.9e-87 325.1 316 52.5
Solyc11g070020.3 Solanum lycopersicum HOM05D006276 ORTHO05D007724 5.9e-87 325.1 321 50.2
Gohir.D05G044300 Gossypium hirsutum HOM05D006276 ORTHO05D007724 1.0e-86 324.3 320 52.5
Nitab4.5_0003550g0010 Nicotiana tabacum HOM05D006276 ORTHO05D007724 1.0e-86 324.3 321 49.8
Nitab4.5_0001107g0140 Nicotiana tabacum HOM05D006276 ORTHO05D007724 2.1e-84 316.6 321 48.9
MSTRG.11659 Avicennia marina HOM05D006276 ORTHO05D007724 4.0e-83 312.4 319 50.5
Hund19457 Selenicereus undatus HOM05D006276 ORTHO05D007724 8.9e-83 311.2 320 50.0
Thhalv10014178m.g Eutrema salsugineum HOM05D006276 ORTHO05D007724 2.6e-82 309.7 317 51.1
FAN15G3491 Fragaria x ananassa HOM05D006276 ORTHO05D007724 3.4e-82 309.3 437 41.9
Migut.E01562 Erythranthe guttata HOM05D006276 ORTHO05D007724 4.4e-82 308.9 317 50.2
BraA03t09860Z Brassica rapa HOM05D006276 ORTHO05D007724 2.9e-81 306.2 317 50.5
Carub.0006s1034 Capsella rubella HOM05D006276 ORTHO05D007724 5.4e-80 302.0 317 50.8
A03p05210 Brassica napus HOM05D006276 ORTHO05D007724 1.2e-79 300.8 317 50.2
EL10Ac2g03891 Beta vulgaris HOM05D006276 ORTHO05D007724 2.0e-79 300.1 320 50.3
SGA_v2.0_scaffold169G38688 Striga asiatica HOM05D006276 ORTHO05D007724 2.0e-79 300.1 319 47.3
AT5G11810 Arabidopsis thaliana HOM05D006276 ORTHO05D007724 3.5e-79 299.3 317 49.2
A10p25940 Brassica napus HOM05D006276 ORTHO05D007724 6.0e-79 298.5 318 49.7
Cfa017950 Carpinus fangiana HOM05D006276 ORTHO05D007724 1.7e-78 297.0 241 61.4
Sp6g31790 Schrenkiella parvula HOM05D006276 ORTHO05D007724 2.3e-78 296.6 317 50.2
BraA10t44656Z Brassica rapa HOM05D006276 ORTHO05D007724 6.6e-78 295.0 318 49.1
Oeu003983.2 Olea europaea HOM05D006276 ORTHO05D007724 4.3e-77 292.4 321 47.4
SalBow1G4959 Salvia bowleyana HOM05D006276 ORTHO05D007724 5.6e-77 292.0 334 47.6
C03p06010 Brassica napus HOM05D006276 ORTHO05D007724 7.3e-77 291.6 317 48.9
PSO478G1664 Papaver somniferum HOM05D006276 ORTHO05D007724 1.6e-76 290.4 333 48.9
BolC3t13112H Brassica oleracea HOM05D006276 ORTHO05D007724 4.7e-76 288.9 317 48.3
CDE06G0120 Ceratophyllum demersum HOM05D006276 ORTHO05D007724 4.7e-76 288.9 325 49.2
HPP92_004831 Vanilla planifolia HOM05D006276 ORTHO05D007724 4.7e-76 288.9 323 48.0
BolC9t59330H Brassica oleracea HOM05D006276 ORTHO05D007724 8.0e-76 288.1 321 47.7
AUR62022071 Chenopodium quinoa HOM05D006276 ORTHO05D007724 1.1e-75 287.7 318 49.4
C09p65020 Brassica napus HOM05D006276 ORTHO05D007724 3.1e-75 286.2 321 47.7
BcaC04g19193 Brassica carinata HOM05D006276 ORTHO05D007724 4.4e-74 282.3 323 47.7
Cpa.g.sc7.176 Carica papaya HOM05D006276 ORTHO05D007724 2.9e-73 279.6 228 61.0
SHI18737 Sapria himalayana HOM05D006276 ORTHO05D007724 6.4e-73 278.5 317 47.6
PSO782G4309 Papaver somniferum HOM05D006276 ORTHO05D007724 8.3e-73 278.1 315 50.2
Prupe.1G412500 Prunus persica HOM05D006276 ORTHO05D007724 1.6e-71 273.9 254 57.9
CiPaw.15G039400 Carya illinoinensis HOM05D006276 ORTHO05D007724 2.1e-71 273.5 324 46.6
AUR62009155 Chenopodium quinoa HOM05D006276 ORTHO05D007724 6.0e-71 271.9 340 44.7
Glyma.14G094000 Glycine max HOM05D006276 ORTHO05D007724 1.0e-70 271.2 242 55.4
BcaB01g05452 Brassica carinata HOM05D006276 ORTHO05D007724 3.9e-70 269.2 317 48.3
Gohir.A05G042600 Gossypium hirsutum HOM05D006276 ORTHO05D007724 7.3e-69 265.0 263 53.2
FAN20G3006 Fragaria x ananassa HOM05D006276 ORTHO05D007724 1.2e-68 264.2 287 49.1
Nn3g20166 Nelumbo nucifera HOM05D006276 ORTHO05D007724 1.2e-68 264.2 276 50.7
Aa31LG3G15390 Aethionema arabicum HOM05D006276 ORTHO05D007724 4.0e-67 259.2 330 44.5
CSS0027263 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 1.1e-64 251.1 297 48.5
Sc09g0009760 Simmondsia chinensis HOM05D006276 ORTHO05D007724 6.0e-63 245.4 296 47.3
PGR044G2277 Punica granatum HOM05D006276 ORTHO05D007724 3.9e-62 242.7 316 43.7
vmacro14246 Vaccinium macrocarpon HOM05D006276 ORTHO05D007724 7.3e-61 238.4 285 48.8
ATR0564G292 Amborella trichopoda HOM05D006276 ORTHO05D007724 3.1e-59 233.0 299 44.1
FAN27G2524 Fragaria x ananassa HOM05D006276 ORTHO05D007724 4.0e-59 232.6 401 36.9
CARHR201350 Cardamine hirsuta HOM05D006276 ORTHO05D007724 8.9e-59 231.5 271 44.6
Zm00001eb231620 Zea mays HOM05D006276 ORTHO05D007724 3.2e-56 223.0 336 40.2
CDE04G1132 Ceratophyllum demersum HOM05D000032 ORTHO05D002561 5.4e-56 222.2 278 46.0
AL6G22560 Arabidopsis lyrata HOM05D006276 ORTHO05D007724 7.1e-56 221.9 233 48.5
SEGI_30057 Sequoiadendron giganteum HOM05D006276 ORTHO05D007724 7.1e-56 221.9 308 43.2
Os02g0135600 Oryza sativa ssp. japonica HOM05D006276 ORTHO05D007724 2.7e-55 219.9 340 39.7
Lj7P276T14 Lonicera japonica HOM05D006276 ORTHO05D007724 8.7e-54 214.9 169 61.5
Mapoly0103s0015 Marchantia polymorpha HOM05D006276 ORTHO05D007724 7.3e-53 211.8 322 37.6
AagrBONN_evm.TU.Sc2ySwM_117.3789 Anthoceros agrestis HOM05D006276 ORTHO05D007724 2.8e-52 209.9 332 36.4
Psat6g020720 Pisum sativum HOM05D006276 ORTHO05D007724 4.0e-51 206.1 198 50.5
Ah.10g034420 Amaranthus hybridus HOM05D006276 ORTHO05D007724 2.3e-46 190.3 314 35.7
unitig_26.g10141 Utricularia gibba HOM05D003606 ORTHO05D004650 1.3e-44 184.5 231 44.2
Pp3c1_29470 Physcomitrium patens HOM05D006276 ORTHO05D007724 4.0e-43 179.5 328 35.4
Thecc.08G113900 Theobroma cacao HOM05D006276 ORTHO05D007724 9.0e-43 178.3 262 40.5
Pp3c14_20160 Physcomitrium patens HOM05D006276 ORTHO05D007724 3.8e-41 172.9 336 35.1
SMO117G0325 Selaginella moellendorffii HOM05D006276 ORTHO05D007724 1.5e-37 161.0 313 35.5
PSO210G7329 Papaver somniferum HOM05D006276 ORTHO05D007724 8.1e-36 155.2 241 41.5
Oeu018645.1 Olea europaea HOM05D006276 ORTHO05D007724 2.1e-15 87.4 55 70.9
CSS0023315 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 1.0e-14 85.1 53 67.9
CSS0029180 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 1.0e-14 85.1 53 67.9
CARHR201360 Cardamine hirsuta HOM05D006276 ORTHO05D007724 2.2e-12 77.4 49 71.4
Lj7A276T16 Lonicera japonica HOM05D006276 ORTHO05D007724 1.5e-10 71.2 49 67.3


User provided reference genes

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