Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014474 Sechium edule HOM05D006015 ORTHO05D007816 1.1e-264 916.0 434 100.0
MELO3C024194.2 Cucumis melo HOM05D006015 ORTHO05D007816 3.4e-234 814.7 437 87.2
ClCG02G002870 Citrullus lanatus HOM05D006015 ORTHO05D007816 8.2e-228 793.5 424 87.0
CsaV3_7G002510 Cucumis sativus L. HOM05D006015 ORTHO05D007816 3.1e-227 791.6 437 85.1
Sed0012767 Sechium edule HOM05D006015 ORTHO05D007816 3.0e-222 775.0 434 82.3
COL.COLO4_33334 Corchorus olitorius HOM05D006015 ORTHO05D007816 1.0e-185 653.7 426 72.3
CiPaw.04G196900 Carya illinoinensis HOM05D006015 ORTHO05D007816 5.5e-184 647.9 426 70.4
MD09G1126500 Malus domestica HOM05D006015 ORTHO05D007816 1.6e-183 646.4 427 70.0
CSS0038739 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 4.7e-183 644.8 425 70.4
Gohir.A11G149000 Gossypium hirsutum HOM05D006015 ORTHO05D007816 1.0e-182 643.7 426 71.8
Thecc.01G195800 Theobroma cacao HOM05D006015 ORTHO05D007816 4.0e-182 641.7 426 71.6
Duzib211G0350 Durio zibethinus HOM05D006015 ORTHO05D007816 5.2e-182 641.3 426 71.1
Duzib138G1954 Durio zibethinus HOM05D006015 ORTHO05D007816 8.9e-182 640.6 427 71.4
Gorai.001G221700 Gossypium raimondii HOM05D006015 ORTHO05D007816 1.2e-181 640.2 426 70.7
Rhsim04G0027900 Rhododendron simsii HOM05D006015 ORTHO05D007816 4.4e-181 638.3 425 69.4
Gohir.D07G198100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 9.8e-181 637.1 426 70.4
Gorai.007G166200 Gossypium raimondii HOM05D006015 ORTHO05D007816 9.8e-181 637.1 428 71.0
QL04p068533 Quercus lobata HOM05D006015 ORTHO05D007816 1.7e-180 636.3 426 69.7
MD17G1116800 Malus domestica HOM05D006015 ORTHO05D007816 2.2e-180 636.0 427 69.1
Manes.12G065800 Manihot esculenta HOM05D006015 ORTHO05D007816 3.7e-180 635.2 432 69.2
Dinv26607 Davidia involucrata HOM05D006015 ORTHO05D007816 4.9e-180 634.8 424 69.6
Gohir.D11G156100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 6.3e-180 634.4 426 71.1
CSS0001355 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 3.1e-179 632.1 427 68.9
CSS0036117 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 3.1e-179 632.1 427 68.9
Sabra14G0127200 Salix brachista HOM05D006015 ORTHO05D007816 4.1e-179 631.7 426 69.7
Potri.014G167200 Populus trichocarpa HOM05D006015 ORTHO05D007816 4.5e-178 628.2 427 69.8
Rhsim06G0176400 Rhododendron simsii HOM05D006015 ORTHO05D007816 4.5e-178 628.2 426 69.5
Cfa014228 Carpinus fangiana HOM05D006015 ORTHO05D007816 1.7e-177 626.3 430 68.4
Medtr1g046210 Medicago truncatula HOM05D006015 ORTHO05D007816 5.0e-177 624.8 427 68.4
Ciclev10015287m.g Citrus clementina HOM05D006015 ORTHO05D007816 1.1e-176 623.6 428 68.9
Psat6g109000 Pisum sativum HOM05D006015 ORTHO05D007816 1.1e-176 623.6 432 68.5
TWI18G0302 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 1.5e-176 623.2 428 68.2
Nn3g19725 Nelumbo nucifera HOM05D006015 ORTHO05D007816 1.2e-175 620.2 425 66.6
Lj6g0021297 Lotus japonicus HOM05D006015 ORTHO05D007816 1.6e-175 619.8 424 67.7
Ca_25000_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 2.8e-175 619.0 432 67.6
Ca_30801_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 2.8e-175 619.0 432 67.6
Lalb_Chr03g0036841 Lupinus albus HOM05D006015 ORTHO05D007816 2.8e-175 619.0 425 67.5
Sc21g0000520 Simmondsia chinensis HOM05D006015 ORTHO05D007816 3.6e-175 618.6 425 67.3
Eucgr.H00879 Eucalyptus grandis HOM05D006015 ORTHO05D007816 6.1e-175 617.8 424 67.5
CANSAT64G2535 Cannabis sativa HOM05D006015 ORTHO05D007816 6.8e-174 614.4 424 67.7
FAN14G1195 Fragaria x ananassa HOM05D006015 ORTHO05D007816 6.8e-174 614.4 423 66.7
FvH4_6g40640 Fragaria vesca HOM05D006015 ORTHO05D007816 8.9e-174 614.0 423 66.4
Cc08_g02360 Coffea canephora HOM05D006015 ORTHO05D007816 1.5e-173 613.2 424 67.0
Aqoxy1G04250 Aquilegia oxysepala HOM05D006015 ORTHO05D007816 2.0e-173 612.8 426 68.5
FAN09G3933 Fragaria x ananassa HOM05D006015 ORTHO05D007816 2.0e-173 612.8 423 66.7
THA.LOC104808847 Tarenaya hassleriana HOM05D006015 ORTHO05D007816 2.0e-173 612.8 426 67.6
RcHm_v2.0_Chr2g0156011 Rosa chinensis HOM05D006015 ORTHO05D007816 2.6e-173 612.5 422 66.8
TPR.G23976 Trifolium pratense HOM05D006015 ORTHO05D007816 2.6e-173 612.5 433 66.7
DCAR_019683 Daucus carota HOM05D006015 ORTHO05D007816 3.4e-173 612.1 425 67.3
FAN02G2834 Fragaria x ananassa HOM05D006015 ORTHO05D007816 4.4e-173 611.7 423 66.4
Phvul.007G239000 Phaseolus vulgaris HOM05D006015 ORTHO05D007816 5.8e-173 611.3 434 66.6
VMungo0720G1520 Vigna mungo HOM05D006015 ORTHO05D007816 5.8e-173 611.3 430 67.7
TWI75G1720 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 9.8e-173 610.5 428 67.1
PGR083G2314 Punica granatum HOM05D006015 ORTHO05D007816 1.3e-172 610.1 427 66.7
FAN05G5154 Fragaria x ananassa HOM05D006015 ORTHO05D007816 4.9e-172 608.2 423 66.4
Glyma.10G128800 Glycine max HOM05D006015 ORTHO05D007816 4.9e-172 608.2 428 66.4
Lalb_Chr01g0011281 Lupinus albus HOM05D006015 ORTHO05D007816 4.9e-172 608.2 434 67.1
TAR629G2010 Trochodendron aralioides HOM05D006015 ORTHO05D007816 1.4e-171 606.7 425 65.6
Migut.K00073 Erythranthe guttata HOM05D006015 ORTHO05D007816 1.9e-171 606.3 429 66.0
Peaxi162Scf00802g00022 Petunia axillaris HOM05D006015 ORTHO05D007816 2.4e-171 605.9 432 67.1
Atru.chr6.3393 Acer truncatum HOM05D006015 ORTHO05D007816 4.1e-171 605.1 423 66.4
Cpa.g.sc136.28 Carica papaya HOM05D006015 ORTHO05D007816 9.2e-171 604.0 424 66.0
Lsat_1_v5_gn_7_96920 Lactuca sativa HOM05D006015 ORTHO05D007816 9.2e-171 604.0 426 66.2
MSTRG.10825 Avicennia marina HOM05D006015 ORTHO05D007816 1.6e-170 603.2 423 67.1
ECA236G0403 Erigeron canadensis HOM05D006015 ORTHO05D007816 1.6e-170 603.2 430 66.3
Sp3g23770 Schrenkiella parvula HOM05D006015 ORTHO05D007816 3.5e-170 602.1 423 66.2
Oeu064356.1 Olea europaea HOM05D006015 ORTHO05D007816 2.3e-169 599.4 428 66.8
Gohir.A07G191800 Gossypium hirsutum HOM05D006015 ORTHO05D007816 8.6e-169 597.4 426 67.4
Thhalv10002538m.g Eutrema salsugineum HOM05D006015 ORTHO05D007816 1.1e-168 597.0 422 66.1
HanXRQChr11g0329021 Helianthus annuus HOM05D006015 ORTHO05D007816 1.5e-168 596.7 425 66.1
AUR62029116 Chenopodium quinoa HOM05D006015 ORTHO05D007816 1.6e-167 593.2 425 65.2
PSO302G0043 Papaver somniferum HOM05D006015 ORTHO05D007816 2.8e-167 592.4 426 64.3
MSTRG.6445 Avicennia marina HOM05D006015 ORTHO05D007816 3.6e-167 592.0 426 65.5
PSO210G7679 Papaver somniferum HOM05D006015 ORTHO05D007816 1.1e-166 590.5 426 64.3
Atru.BG.41.p Acer truncatum HOM05D006015 ORTHO05D007816 2.3e-166 589.3 355 74.1
Carub.0003s2938 Capsella rubella HOM05D006015 ORTHO05D007816 3.1e-166 589.0 424 65.6
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 4.0e-166 588.6 358 74.3
BcaB08g34500 Brassica carinata HOM05D006015 ORTHO05D007816 6.8e-166 587.8 421 65.6
Nitab4.5_0001867g0080 Nicotiana tabacum HOM05D006015 ORTHO05D007816 1.5e-165 586.6 428 65.4
PGSC0003DMG400017397 Solanum tuberosum HOM05D006015 ORTHO05D007816 1.5e-165 586.6 429 65.7
Sopen07g024010 Solanum pennellii HOM05D006015 ORTHO05D007816 5.8e-165 584.7 429 65.7
CAN.G177.8 Capsicum annuum HOM05D006015 ORTHO05D007816 9.8e-165 583.9 426 64.6
BcaC01g03165 Brassica carinata HOM05D006015 ORTHO05D007816 2.9e-164 582.4 420 66.4
ATR0827G116 Amborella trichopoda HOM05D006015 ORTHO05D007816 3.7e-164 582.0 431 64.0
C03p55440 Brassica napus HOM05D006015 ORTHO05D007816 3.7e-164 582.0 421 66.3
BolC3t17819H Brassica oleracea HOM05D006015 ORTHO05D007816 4.9e-164 581.6 420 66.4
Solyc07g045470.3 Solanum lycopersicum HOM05D006015 ORTHO05D007816 6.4e-164 581.3 429 65.0
vmacro12084 Vaccinium macrocarpon HOM05D006015 ORTHO05D007816 8.3e-164 580.9 345 74.5
Nitab4.5_0001701g0190 Nicotiana tabacum HOM05D006015 ORTHO05D007816 1.1e-163 580.5 420 65.5
MBI16_g07770_MAGBIO Magnolia biondii HOM05D006015 ORTHO05D007816 1.4e-163 580.1 427 63.7
AT2G05320 Arabidopsis thaliana HOM05D006015 ORTHO05D007816 2.4e-163 579.3 424 64.2
AL3G42830 Arabidopsis lyrata HOM05D006015 ORTHO05D007816 1.6e-162 576.6 424 64.2
A03p44610 Brassica napus HOM05D006015 ORTHO05D007816 2.1e-162 576.2 422 64.7
BraA03t13594Z Brassica rapa HOM05D006015 ORTHO05D007816 2.1e-162 576.2 422 64.7
Ah.01g002640 Amaranthus hybridus HOM05D006015 ORTHO05D007816 2.7e-162 575.9 358 72.3
Aa31LG8G11520 Aethionema arabicum HOM05D006015 ORTHO05D007816 2.3e-161 572.8 424 63.4
CARHR103100 Cardamine hirsuta HOM05D006015 ORTHO05D007816 5.1e-161 571.6 351 73.5
Lj1P796T26 Lonicera japonica HOM05D006015 ORTHO05D007816 1.9e-160 569.7 336 75.3
Os02g0798100 Oryza sativa ssp. japonica HOM05D006015 ORTHO05D007816 1.9e-160 569.7 356 71.6
Actinidia07868 Actinidia chinensis HOM05D006015 ORTHO05D007816 1.2e-159 567.0 425 63.8
Lj8P135T89 Lonicera japonica HOM05D006015 ORTHO05D007816 1.2e-159 567.0 335 74.9
unitig_37.g12711 Utricularia gibba HOM05D006015 ORTHO05D007816 3.1e-158 562.4 429 62.7
CDE05G3376 Ceratophyllum demersum HOM05D006015 ORTHO05D007816 3.4e-157 558.9 421 62.2
SGA_v2.0_scaffold94G28455 Striga asiatica HOM05D003478 ORTHO05D004196 5.8e-157 558.1 429 63.2
Zm00001eb192260 Zea mays HOM05D006015 ORTHO05D007816 7.5e-157 557.8 356 69.9
HPP92_001839 Vanilla planifolia HOM05D006015 ORTHO05D007816 1.4e-155 553.5 380 65.8
SHI10157 Sapria himalayana HOM05D006015 ORTHO05D007816 1.9e-152 543.1 359 67.1
AUR62015007 Chenopodium quinoa HOM05D006015 ORTHO05D007816 3.3e-152 542.3 403 64.0
Nn1g02851 Nelumbo nucifera HOM05D006015 ORTHO05D007816 2.8e-151 539.3 417 61.9
Migut.J01779 Erythranthe guttata HOM05D006015 ORTHO05D007816 3.6e-151 538.9 428 60.7
SEGI_05803 Sequoiadendron giganteum HOM05D006015 ORTHO05D007816 2.9e-148 529.3 366 65.6
Actinidia18833 Actinidia chinensis HOM05D006015 ORTHO05D007816 1.6e-138 496.9 425 56.9
Pp3c12_25130 Physcomitrium patens HOM05D006015 ORTHO05D007816 1.8e-134 483.4 376 59.0
Glyma.20G080200 Glycine max HOM05D006015 ORTHO05D007816 6.9e-134 481.5 284 72.9
Prupe.3G198000 Prunus persica HOM05D006015 ORTHO05D007816 1.2e-133 480.7 283 73.5
Pp3c8_6700 Physcomitrium patens HOM05D006015 ORTHO05D007816 3.4e-133 479.2 412 55.3
SMO358G0350 Selaginella moellendorffii HOM05D006015 ORTHO05D007816 1.8e-129 466.8 363 57.9
Mapoly0086s0006 Marchantia polymorpha HOM05D006015 ORTHO05D007816 2.4e-126 456.4 359 60.7
SalBow1G4868 Salvia bowleyana HOM05D006015 ORTHO05D007816 2.2e-108 396.7 340 57.6
SalBow6G1876 Salvia bowleyana HOM05D006015 ORTHO05D007816 6.7e-97 358.6 215 73.0
MSTRG.26113 Avicennia marina HOM05D006015 ORTHO05D007816 6.3e-95 352.1 211 72.5
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 5.3e-94 349.0 210 73.8
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis HOM05D006015 ORTHO05D007816 1.5e-91 340.9 357 49.0
CBR_g52107 Chara braunii HOM05D006015 ORTHO05D000002 3.6e-90 336.3 279 56.6
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 5.9e-61 239.2 237 54.0
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 1.1e-54 218.4 379 38.8
Nn5g28971 Nelumbo nucifera HOM05D006015 ORTHO05D007816 5.1e-28 129.8 98 56.1
EL10Ac8g18725 Beta vulgaris HOM05D006015 ORTHO05D007816 1.3e-26 125.2 80 67.5
Actinidia35205 Actinidia chinensis HOM05D001060 ORTHO05D000905 8.4e-23 112.5 201 32.8
Aa31LG8G11540 Aethionema arabicum HOM05D006015 ORTHO05D007816 5.8e-16 89.7 115 43.5
Aa31LG8G11530 Aethionema arabicum HOM05D006015 ORTHO05D059074 9.3e-06 55.8 76 43.4


User provided reference genes

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