Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014459 Sechium edule HOM05D000896 ORTHO05D000594 1.9e-72 275.8 142 100.0
ClCG08G015080 Citrullus lanatus HOM05D000896 ORTHO05D000594 1.3e-28 130.2 197 43.7
MELO3C010943.2 Cucumis melo HOM05D000896 ORTHO05D000594 1.3e-25 120.2 197 40.6
CsaV3_2G028710 Cucumis sativus L. HOM05D000896 ORTHO05D000594 1.5e-24 116.7 174 41.4
ClCG08G015060 Citrullus lanatus HOM05D000896 ORTHO05D000594 2.2e-20 102.8 186 39.8
ClCG01G006250 Citrullus lanatus HOM05D000896 ORTHO05D000594 3.3e-16 89.0 112 47.3
MELO3C005256.2 Cucumis melo HOM05D000896 ORTHO05D000594 6.1e-15 84.7 111 45.0
MELO3C005283.2 Cucumis melo HOM05D000896 ORTHO05D000594 8.9e-14 80.9 111 45.9
ClCG01G006230 Citrullus lanatus HOM05D000896 ORTHO05D000594 1.2e-13 80.5 107 44.9
CsaV3_5G027980 Cucumis sativus L. HOM05D000896 ORTHO05D000594 2.0e-13 79.7 76 53.9
CsaV3_5G028430 Cucumis sativus L. HOM05D000896 ORTHO05D000594 3.4e-13 79.0 76 53.9
MELO3C005306.2 Cucumis melo HOM05D000896 ORTHO05D000594 5.7e-13 78.2 76 52.6
CsaV3_5G027950 Cucumis sativus L. HOM05D000896 ORTHO05D000594 5.7e-13 78.2 76 52.6
Sed0016322 Sechium edule HOM05D000896 ORTHO05D000594 9.8e-13 77.4 109 39.4
CsaV3_2G029240 Cucumis sativus L. HOM05D000896 ORTHO05D000594 3.1e-11 72.4 78 46.2
CsaV3_5G028440 Cucumis sativus L. HOM05D000896 ORTHO05D000594 5.4e-11 71.6 72 51.4
MELO3C005282.2 Cucumis melo HOM05D000896 ORTHO05D000594 9.2e-11 70.9 63 54.0
CsaV3_5G028220 Cucumis sativus L. HOM05D000896 ORTHO05D000594 7.8e-10 67.8 66 53.0
MELO3C010986.2 Cucumis melo HOM05D000896 ORTHO05D000594 1.3e-09 67.0 74 47.3
Sed0019902 Sechium edule HOM05D000896 ORTHO05D000594 1.3e-09 67.0 77 45.5
ClCG08G014520 Citrullus lanatus HOM05D000001 ORTHO05D009054 2.3e-09 66.2 106 38.7
Sed0008121 Sechium edule HOM05D000896 ORTHO05D000594 1.1e-08 63.9 77 45.5
Cfa004691 Carpinus fangiana HOM05D000896 ORTHO05D000594 1.9e-08 63.2 109 36.7
Medtr5g092880 Medicago truncatula HOM05D000896 ORTHO05D000594 3.3e-08 62.4 108 32.4
Cfa004709 Carpinus fangiana HOM05D000896 ORTHO05D000594 5.6e-08 61.6 109 35.8
Cfa004780 Carpinus fangiana HOM05D000896 ORTHO05D000594 7.3e-08 61.2 111 36.0
ClCG11G011860 Citrullus lanatus HOM05D000896 ORTHO05D000594 7.3e-08 61.2 82 34.1
Sopen03g038390 Solanum pennellii HOM05D000896 ORTHO05D000594 9.5e-08 60.8 92 35.9
Duzib138G1815 Durio zibethinus HOM05D000896 ORTHO05D000594 4.7e-07 58.5 78 37.2
Actinidia39404 Actinidia chinensis HOM05D000896 ORTHO05D000594 6.1e-07 58.2 77 37.7
Gohir.A12G043480 Gossypium hirsutum HOM05D000896 ORTHO05D000594 1.0e-06 57.4 114 36.0
Gohir.A12G043560 Gossypium hirsutum HOM05D000896 ORTHO05D000594 1.0e-06 57.4 114 36.0
Gohir.A12G043720 Gossypium hirsutum HOM05D000896 ORTHO05D000594 1.0e-06 57.4 114 36.0
Gorai.008G045100 Gossypium raimondii HOM05D000896 ORTHO05D000594 1.0e-06 57.4 114 36.0
Sc09g0005030 Simmondsia chinensis HOM05D000896 ORTHO05D000594 1.0e-06 57.4 79 38.0
Eucgr.I00811 Eucalyptus grandis HOM05D000896 ORTHO05D000594 1.4e-06 57.0 78 38.5
Sc09g0004960 Simmondsia chinensis HOM05D000896 ORTHO05D000594 1.4e-06 57.0 79 38.0
Medtr7g098870 Medicago truncatula HOM05D000896 ORTHO05D000594 2.3e-06 56.2 77 36.4
Cfa004767 Carpinus fangiana HOM05D000896 ORTHO05D000594 3.0e-06 55.8 104 33.7
Cfa004786 Carpinus fangiana HOM05D000896 ORTHO05D000594 3.0e-06 55.8 110 32.7
Duzib138G1324 Durio zibethinus HOM05D000896 ORTHO05D000594 3.0e-06 55.8 80 38.8
Gohir.D12G042950 Gossypium hirsutum HOM05D000896 ORTHO05D000594 3.0e-06 55.8 91 36.3
Sc09g0004970 Simmondsia chinensis HOM05D000896 ORTHO05D000594 3.0e-06 55.8 92 34.8
TPR.G28339 Trifolium pratense HOM05D000896 ORTHO05D000594 3.0e-06 55.8 113 31.0
Nitab4.5_0011772g0030 Nicotiana tabacum HOM05D000896 ORTHO05D000594 4.0e-06 55.5 94 30.9
DCAR_025815 Daucus carota HOM05D000896 ORTHO05D000594 5.2e-06 55.1 88 34.1
Eucgr.I00861 Eucalyptus grandis HOM05D000896 ORTHO05D000594 5.2e-06 55.1 95 34.7
Gorai.008G045700 Gossypium raimondii HOM05D000896 ORTHO05D000594 5.2e-06 55.1 114 34.2
TPR.G1152 Trifolium pratense HOM05D000896 ORTHO05D000594 6.8e-06 54.7 137 29.9
Gohir.D12G043450 Gossypium hirsutum HOM05D000896 ORTHO05D000594 8.9e-06 54.3 91 36.3
Gorai.008G045000 Gossypium raimondii HOM05D000896 ORTHO05D000594 8.9e-06 54.3 91 35.2
Sc09g0004860 Simmondsia chinensis HOM05D000896 ORTHO05D000594 8.9e-06 54.3 97 33.0
TPR.G9525 Trifolium pratense HOM05D000896 ORTHO05D000594 8.9e-06 54.3 101 31.7


User provided reference genes

Program Settings