Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014415 Sechium edule HOM05D013362 ORTHO05D013626 7.5e-234 813.5 427 100.0
Sed0002684 Sechium edule HOM05D013362 ORTHO05D013626 2.1e-95 353.6 371 59.8
Sed0004924 Sechium edule HOM05D013362 ORTHO05D013626 9.2e-91 338.2 402 51.0
Sed0021824 Sechium edule HOM05D013362 ORTHO05D013626 2.6e-69 266.9 356 49.7
Sed0019183 Sechium edule HOM05D013362 ORTHO05D013626 6.3e-55 219.2 437 39.8
Sed0023167 Sechium edule HOM05D013362 ORTHO05D013626 2.9e-44 183.7 127 73.2
Sed0023222 Sechium edule HOM05D007907 ORTHO05D009079 5.1e-41 172.9 165 47.3
MELO3C007522.2 Cucumis melo HOM05D007907 ORTHO05D009079 2.2e-36 157.5 165 44.8
CsaV3_6G042820 Cucumis sativus L. HOM05D007907 ORTHO05D009079 5.5e-35 152.9 165 43.6
Sed0000312 Sechium edule HOM05D007907 ORTHO05D009079 3.3e-32 143.7 166 41.0
Sed0007316 Sechium edule HOM05D013362 ORTHO05D013626 4.4e-32 143.3 178 47.8
Sed0016061 Sechium edule HOM05D000346 ORTHO05D000326 4.4e-32 143.3 92 83.7
Sed0005270 Sechium edule HOM05D013362 ORTHO05D013626 4.2e-27 126.7 120 62.5
MELO3C028279.2 Cucumis melo HOM05D007907 ORTHO05D009079 3.7e-23 113.6 177 32.8
MELO3C029011.2 Cucumis melo HOM05D007907 ORTHO05D009079 1.8e-22 111.3 179 33.5
MELO3C034303.2 Cucumis melo HOM05D007907 ORTHO05D009079 3.1e-22 110.5 243 30.9
MELO3C029044.2 Cucumis melo HOM05D007907 ORTHO05D009079 2.2e-20 104.4 177 32.8
Sed0011016 Sechium edule HOM05D007907 ORTHO05D009079 2.2e-20 104.4 141 36.2
MELO3C033233.2 Cucumis melo HOM05D007907 ORTHO05D009079 2.1e-18 97.8 179 31.3
Sed0023929 Sechium edule HOM05D007907 ORTHO05D009079 2.1e-18 97.8 155 31.0
Sed0009053 Sechium edule HOM05D015538 ORTHO05D013626 2.7e-18 97.4 146 44.5
MELO3C032179.2 Cucumis melo HOM05D007907 ORTHO05D009079 8.0e-18 95.9 260 28.1
CANSAT80G2675 Cannabis sativa HOM05D002262 ORTHO05D000482 4.0e-17 93.6 158 31.0
Sed0015265 Sechium edule HOM05D008761 ORTHO05D009079 1.5e-16 91.7 184 28.8
MELO3C034907.2 Cucumis melo HOM05D008761 ORTHO05D009079 4.4e-16 90.1 187 29.4
MELO3C033964.2 Cucumis melo HOM05D007907 ORTHO05D009079 4.9e-15 86.7 97 39.2
ClCG02G010270 Citrullus lanatus HOM05D007907 ORTHO05D020468 8.3e-15 85.9 328 26.5
Sed0027769 Sechium edule HOM05D028453 ORTHO05D009079 1.1e-14 85.5 95 42.1
MELO3C030511.2 Cucumis melo HOM05D008761 ORTHO05D009079 2.4e-14 84.3 161 31.1
MELO3C028809.2 Cucumis melo HOM05D007907 ORTHO05D009079 4.1e-14 83.6 95 41.1
MELO3C027609.2 Cucumis melo HOM05D008761 ORTHO05D009079 9.1e-14 82.4 183 28.4
MELO3C032715.2 Cucumis melo HOM05D008761 ORTHO05D009079 1.2e-13 82.0 109 34.9
Sed0013335 Sechium edule HOM05D007907 ORTHO05D009079 2.0e-13 81.3 170 28.2
ClCG07G007930 Citrullus lanatus HOM05D007907 ORTHO05D009079 2.7e-13 80.9 117 34.2
MELO3C027792.2 Cucumis melo HOM05D008761 ORTHO05D009079 2.7e-13 80.9 145 30.3
PSO063G4195 Papaver somniferum HOM05D007816 ORTHO05D000397 2.7e-13 80.9 190 30.0
Oeu025649.1 Olea europaea HOM05D002749 ORTHO05D000482 2.3e-12 77.8 167 28.7
PSO421G0071 Papaver somniferum HOM05D007816 ORTHO05D000397 2.9e-12 77.4 189 28.6
Sed0015983 Sechium edule HOM05D007907 ORTHO05D000482 2.9e-12 77.4 132 31.1
MELO3C030528.2 Cucumis melo HOM05D007907 ORTHO05D009079 5.0e-12 76.6 169 27.8
MELO3C033465.2 Cucumis melo HOM05D008761 ORTHO05D009079 6.6e-12 76.3 166 27.7
MELO3C034600.2 Cucumis melo HOM05D008761 ORTHO05D009079 1.5e-11 75.1 174 28.7
Oeu037738.1 Olea europaea HOM05D002262 ORTHO05D000482 1.5e-11 75.1 158 29.7
MELO3C029203.2 Cucumis melo HOM05D008761 ORTHO05D009079 2.5e-11 74.3 154 29.9
MELO3C032772.2 Cucumis melo HOM05D008761 ORTHO05D009079 2.5e-11 74.3 166 28.3
MELO3C032947.2 Cucumis melo HOM05D017798 ORTHO05D020468 7.2e-11 72.8 64 50.0
Sed0025466 Sechium edule HOM05D007907 ORTHO05D009079 7.2e-11 72.8 118 28.8
MELO3C028970.2 Cucumis melo HOM05D008761 ORTHO05D009079 1.2e-10 72.0 131 29.8
Sed0001617 Sechium edule HOM05D013362 ORTHO05D013626 1.2e-10 72.0 134 41.0
Sed0023954 Sechium edule HOM05D007907 ORTHO05D000482 1.2e-10 72.0 148 27.7
Oeu036698.1 Olea europaea HOM05D002749 ORTHO05D000708 1.6e-10 71.6 149 24.8
CsaV3_1G032310 Cucumis sativus L. HOM05D010240 ORTHO05D000482 2.8e-10 70.9 169 30.2
CsaV3_5G014580 Cucumis sativus L. HOM05D010240 ORTHO05D010739 2.8e-10 70.9 169 30.2
CsaV3_6G008220 Cucumis sativus L. HOM05D010240 ORTHO05D000482 2.8e-10 70.9 169 30.2
Oeu063770.1 Olea europaea HOM05D002749 ORTHO05D000482 4.7e-10 70.1 158 29.1
Oeu061662.1 Olea europaea HOM05D002749 ORTHO05D000708 6.1e-10 69.7 155 25.8
MELO3C034511.2 Cucumis melo HOM05D008761 ORTHO05D009079 8.0e-10 69.3 144 30.6
Ciclev10017905m.g Citrus clementina HOM05D007816 ORTHO05D000482 1.0e-09 68.9 287 23.3
MELO3C033503.2 Cucumis melo HOM05D007907 ORTHO05D009079 1.0e-09 68.9 58 50.0
CAN.G290.11 Capsicum annuum HOM05D000541 ORTHO05D000137 1.8e-09 68.2 130 28.5
MELO3C000001.2 Cucumis melo HOM05D017798 ORTHO05D020468 1.8e-09 68.2 81 39.5
TWI77G0435 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 1.8e-09 68.2 173 29.5
Nitab4.5_0006237g0050 Nicotiana tabacum HOM05D008646 ORTHO05D010739 2.3e-09 67.8 198 24.2
Oeu052838.1 Olea europaea HOM05D002749 ORTHO05D000708 2.3e-09 67.8 167 24.6
Nitab4.5_0001732g0040 Nicotiana tabacum HOM05D008646 ORTHO05D010739 3.0e-09 67.4 200 23.5
MELO3C028439.2 Cucumis melo HOM05D008761 ORTHO05D009079 6.8e-09 66.2 110 30.9
Nitab4.5_0004192g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 8.9e-09 65.9 149 24.2
TWI14G0228 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 8.9e-09 65.9 155 26.5
TWI38G0271 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 8.9e-09 65.9 155 26.5
TWI59G0262 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 8.9e-09 65.9 155 26.5
TWI73G0375 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 8.9e-09 65.9 155 26.5
TWI75G0282 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 8.9e-09 65.9 155 26.5
CAN.G681.13 Capsicum annuum HOM05D000541 ORTHO05D000137 1.2e-08 65.5 130 29.2
CAN.G1181.32 Capsicum annuum HOM05D000541 ORTHO05D000137 1.5e-08 65.1 147 27.9
Nitab4.5_0000471g0160 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.5e-08 65.1 146 31.5
Nitab4.5_0004855g0040 Nicotiana tabacum HOM05D008646 ORTHO05D010739 1.5e-08 65.1 198 23.7
Nitab4.5_0009203g0010 Nicotiana tabacum HOM05D008646 ORTHO05D010739 1.5e-08 65.1 198 23.7
CAN.G1634.5 Capsicum annuum HOM05D000541 ORTHO05D000137 2.0e-08 64.7 146 28.1
MELO3C033168.2 Cucumis melo HOM05D026391 ORTHO05D009079 2.6e-08 64.3 95 31.6
CAN.G1328.10 Capsicum annuum HOM05D000541 ORTHO05D000137 3.4e-08 63.9 173 25.4
Nitab4.5_0000721g0150 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.4e-08 63.9 157 22.9
Solyc10g150130.1 Solanum lycopersicum HOM05D002262 ORTHO05D000482 3.4e-08 63.9 176 26.1
MELO3C028249.2 Cucumis melo HOM05D008761 ORTHO05D009079 4.4e-08 63.5 103 32.0
MELO3C033891.2 Cucumis melo HOM05D008761 ORTHO05D009079 5.7e-08 63.2 118 28.8
CsaV3_3G032530 Cucumis sativus L. HOM05D008761 ORTHO05D009079 5.7e-08 63.2 103 31.1
CAN.G2210.1 Capsicum annuum HOM05D000541 ORTHO05D000137 7.5e-08 62.8 130 27.7
CAN.G375.69 Capsicum annuum HOM05D000541 ORTHO05D000137 7.5e-08 62.8 130 27.7
TWI18G0509 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 7.5e-08 62.8 176 28.4
MELO3C032062.2 Cucumis melo HOM05D008761 ORTHO05D009079 9.8e-08 62.4 151 25.8
CsaV3_2G013490 Cucumis sativus L. HOM05D008761 ORTHO05D009079 9.8e-08 62.4 103 29.1
CsaV3_2G032890 Cucumis sativus L. HOM05D008761 ORTHO05D009079 9.8e-08 62.4 103 31.1
Nitab4.5_0000252g0250 Nicotiana tabacum HOM05D006812 ORTHO05D000482 9.8e-08 62.4 155 22.6
Nitab4.5_0003392g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 9.8e-08 62.4 165 28.5
Oeu029820.1 Olea europaea HOM05D008585 ORTHO05D000397 1.3e-07 62.0 172 29.7
TWI63G0135 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.3e-07 62.0 176 27.8
MELO3C031312.2 Cucumis melo HOM05D007907 ORTHO05D009079 1.7e-07 61.6 109 31.2
Sed0017413 Sechium edule HOM05D019397 ORTHO05D009079 1.7e-07 61.6 140 28.6
Solyc10g050777.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 1.7e-07 61.6 162 25.9
PGSC0003DMG400002216 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.7e-07 61.6 133 27.8
CAN.G467.20 Capsicum annuum HOM05D000541 ORTHO05D000137 2.2e-07 61.2 130 26.9
CAN.G134.37 Capsicum annuum HOM05D000541 ORTHO05D000137 2.9e-07 60.8 146 26.7
Nitab4.5_0004808g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.9e-07 60.8 156 25.0
Nitab4.5_0008937g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.9e-07 60.8 154 27.3
MELO3C031377.2 Cucumis melo HOM05D008761 ORTHO05D009079 4.9e-07 60.1 108 30.6
MELO3C035049.2 Cucumis melo HOM05D008761 ORTHO05D009079 6.3e-07 59.7 108 28.7
Sed0006677 Sechium edule HOM05D007907 ORTHO05D009079 6.3e-07 59.7 59 42.4
PGSC0003DMG400017393 Solanum tuberosum HOM05D007732 ORTHO05D010105 6.3e-07 59.7 113 27.4
PGSC0003DMG400006647 Solanum tuberosum HOM05D000541 ORTHO05D000137 8.3e-07 59.3 122 27.9
C03p78210 Brassica napus HOM05D000977 ORTHO05D001094 1.4e-06 58.5 119 31.9
Solyc08g065193.1 Solanum lycopersicum HOM05D002262 ORTHO05D000482 1.4e-06 58.5 162 25.9
SGA_v2.0_scaffold448G51779 Striga asiatica HOM05D008585 ORTHO05D000397 1.8e-06 58.2 155 29.0
BolC6t36478H Brassica oleracea HOM05D000977 ORTHO05D001094 2.4e-06 57.8 123 29.3
BolC8t48388H Brassica oleracea HOM05D000977 ORTHO05D001094 2.4e-06 57.8 120 32.5
Oeu042812.1 Olea europaea HOM05D007816 ORTHO05D000397 2.4e-06 57.8 129 31.0
BolC1t02514H Brassica oleracea HOM05D000977 ORTHO05D001094 3.2e-06 57.4 83 38.6
CAN.G606.27 Capsicum annuum HOM05D000541 ORTHO05D000137 3.2e-06 57.4 130 25.4
CAN.G960.83 Capsicum annuum HOM05D000541 ORTHO05D000137 3.2e-06 57.4 112 29.5
MELO3C035122.2 Cucumis melo HOM05D008761 ORTHO05D009079 3.2e-06 57.4 116 28.4
Nitab4.5_0011972g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.2e-06 57.4 136 25.7
Nitab4.5_0014964g0010 Nicotiana tabacum HOM05D008646 ORTHO05D010739 3.2e-06 57.4 140 25.0
Oeu044756.1 Olea europaea HOM05D007816 ORTHO05D000397 3.2e-06 57.4 163 28.2
CAN.G184.46 Capsicum annuum HOM05D000541 ORTHO05D000137 4.1e-06 57.0 127 26.0
Nitab4.5_0003201g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000482 4.1e-06 57.0 134 28.4
PGSC0003DMG400025087 Solanum tuberosum HOM05D000541 ORTHO05D000137 4.1e-06 57.0 100 27.0
TWI18G0558 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.1e-06 57.0 245 24.9
BcaC08g44291 Brassica carinata HOM05D000977 ORTHO05D001094 7.0e-06 56.2 137 29.2
CAN.G568.8 Capsicum annuum HOM05D000541 ORTHO05D000137 7.0e-06 56.2 164 28.7
Solyc03g034207.1 Solanum lycopersicum HOM05D000679 ORTHO05D000482 7.0e-06 56.2 202 23.8
Atru.chr4.2113 Acer truncatum HOM05D008181 ORTHO05D000397 9.2e-06 55.8 153 28.1
BcaC05g28638 Brassica carinata HOM05D000977 ORTHO05D001094 9.2e-06 55.8 102 33.3
CAN.G699.5 Capsicum annuum HOM05D000541 ORTHO05D000137 9.2e-06 55.8 144 25.7


User provided reference genes

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