Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014393 Sechium edule HOM05D007285 ORTHO05D009224 3.2e-51 204.9 112 100.0
ClCG03G008150 Citrullus lanatus HOM05D007285 ORTHO05D009224 7.6e-45 183.7 112 87.5
CsaV3_1G012400 Cucumis sativus L. HOM05D007285 ORTHO05D009224 5.0e-44 181.0 112 86.6
Sed0001788 Sechium edule HOM05D007285 ORTHO05D009224 2.1e-42 175.6 112 83.9
COL.COLO4_31450 Corchorus olitorius HOM05D007285 ORTHO05D009224 6.7e-33 144.1 106 74.5
Gohir.D06G133300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 2.0e-32 142.5 103 75.7
Gorai.010G155100 Gossypium raimondii HOM05D007285 ORTHO05D009224 2.0e-32 142.5 103 75.7
RcHm_v2.0_Chr5g0008721 Rosa chinensis HOM05D007285 ORTHO05D009224 2.8e-31 138.7 111 68.5
FAN21G1653 Fragaria x ananassa HOM05D007285 ORTHO05D009224 3.7e-31 138.3 112 69.6
FAN16G1611 Fragaria x ananassa HOM05D007285 ORTHO05D009224 4.8e-31 137.9 113 69.0
Atru.chr10.1858 Acer truncatum HOM05D007285 ORTHO05D009224 6.3e-31 137.5 112 66.1
Actinidia07587 Actinidia chinensis HOM05D007285 ORTHO05D009224 1.1e-30 136.7 109 69.7
Gohir.A06G129300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 1.4e-30 136.3 103 72.8
FvH4_3g08990 Fragaria vesca HOM05D007285 ORTHO05D009224 2.4e-30 135.6 113 68.1
FAN25G3510 Fragaria x ananassa HOM05D007285 ORTHO05D009224 5.3e-30 134.4 117 65.8
Thecc.06G185100 Theobroma cacao HOM05D007285 ORTHO05D009224 6.9e-30 134.0 104 70.2
Glyma.07G198400 Glycine max HOM05D007285 ORTHO05D009224 1.2e-29 133.3 95 74.7
Prupe.4G049200 Prunus persica HOM05D007285 ORTHO05D009224 1.2e-29 133.3 105 67.6
PGR042G2867 Punica granatum HOM05D007285 ORTHO05D009224 1.5e-29 132.9 103 68.9
Phvul.002G229600 Phaseolus vulgaris HOM05D007285 ORTHO05D009224 3.4e-29 131.7 108 65.7
VMungo0251G0987 Vigna mungo HOM05D007285 ORTHO05D009224 3.4e-29 131.7 106 67.0
MD00G1116000 Malus domestica HOM05D007285 ORTHO05D009224 5.9e-29 131.0 106 64.2
Glyma.13G178000 Glycine max HOM05D007285 ORTHO05D009224 7.7e-29 130.6 97 73.2
Lj4g0016922 Lotus japonicus HOM05D007285 ORTHO05D009224 7.7e-29 130.6 108 65.7
Potri.004G045400 Populus trichocarpa HOM05D007285 ORTHO05D009224 7.7e-29 130.6 100 69.0
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla HOM05D007285 ORTHO05D009224 1.3e-28 129.8 107 66.4
Psat7g114520 Pisum sativum HOM05D007285 ORTHO05D009224 1.3e-28 129.8 104 69.2
MD10G1292600 Malus domestica HOM05D007285 ORTHO05D009224 1.7e-28 129.4 104 66.3
Medtr4g088680 Medicago truncatula HOM05D007285 ORTHO05D009224 1.7e-28 129.4 108 68.5
Actinidia26129 Actinidia chinensis HOM05D007285 ORTHO05D009224 2.9e-28 128.6 109 67.0
Nitab4.5_0005745g0020 Nicotiana tabacum HOM05D007285 ORTHO05D009224 3.8e-28 128.3 112 65.2
Ciclev10017252m.g Citrus clementina HOM05D007285 ORTHO05D009224 5.0e-28 127.9 106 64.2
Ca_18554_v3 Cicer arietinum L. HOM05D007285 ORTHO05D009224 6.5e-28 127.5 108 67.6
Rhsim02G0132100 Rhododendron simsii HOM05D007285 ORTHO05D009224 6.5e-28 127.5 109 66.1
Manes.17G046800 Manihot esculenta HOM05D007285 ORTHO05D009224 8.5e-28 127.1 92 73.9
TWI38G2229 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 8.5e-28 127.1 101 66.3
TPR.G16329 Trifolium pratense HOM05D007285 ORTHO05D009224 1.4e-27 126.3 108 66.7
Peaxi162Scf00623g00519 Petunia axillaris HOM05D007285 ORTHO05D009224 1.9e-27 125.9 115 65.2
CiPaw.09G061300 Carya illinoinensis HOM05D007285 ORTHO05D009224 5.5e-27 124.4 108 63.9
Eucgr.E03264 Eucalyptus grandis HOM05D007285 ORTHO05D009224 9.4e-27 123.6 102 64.7
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea HOM05D007285 ORTHO05D009224 1.2e-26 123.2 91 71.4
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea HOM05D007285 ORTHO05D009224 1.2e-26 123.2 91 71.4
BolC3t19748H Brassica oleracea HOM05D007285 ORTHO05D009224 2.1e-26 122.5 97 63.9
Dinv40575 Davidia involucrata HOM05D007285 ORTHO05D009224 2.1e-26 122.5 109 64.2
TWI63G1057 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 2.1e-26 122.5 92 69.6
Aa31LG6G10160 Aethionema arabicum HOM05D007285 ORTHO05D009224 2.7e-26 122.1 95 66.3
CAN.G529.14 Capsicum annuum HOM05D007285 ORTHO05D009224 3.6e-26 121.7 103 68.0
Hund23773 Selenicereus undatus HOM05D007285 ORTHO05D009224 3.6e-26 121.7 112 64.3
CSS0032734 Camellia sinensis var. sinensis HOM05D007285 ORTHO05D009224 4.7e-26 121.3 109 63.3
CARHR027740 Cardamine hirsuta HOM05D007285 ORTHO05D009224 4.7e-26 121.3 93 65.6
AL1G41800 Arabidopsis lyrata HOM05D007285 ORTHO05D009224 6.1e-26 120.9 97 61.9
Carub.0001s2669 Capsella rubella HOM05D007285 ORTHO05D009224 8.0e-26 120.6 108 60.2
Sopen02g022850 Solanum pennellii HOM05D007285 ORTHO05D009224 8.0e-26 120.6 109 63.3
MSTRG.7339 Avicennia marina HOM05D007285 ORTHO05D009224 1.0e-25 120.2 113 62.8
Solyc02g078010.4 Solanum lycopersicum HOM05D007285 ORTHO05D009224 1.0e-25 120.2 109 63.3
THA.LOC104820545 Tarenaya hassleriana HOM05D007285 ORTHO05D009224 1.0e-25 120.2 106 61.3
AT1G28250 Arabidopsis thaliana HOM05D007285 ORTHO05D009224 1.4e-25 119.8 97 61.9
Lalb_Chr15g0089751 Lupinus albus HOM05D007285 ORTHO05D009224 1.8e-25 119.4 109 64.2
C05p27060 Brassica napus HOM05D007285 ORTHO05D009224 5.2e-25 117.9 92 65.2
SalBow8G5072 Salvia bowleyana HOM05D007285 ORTHO05D009224 6.7e-25 117.5 92 70.7
EL10Ac8g20395 Beta vulgaris HOM05D007285 ORTHO05D009224 8.8e-25 117.1 112 62.5
Dinv17325 Davidia involucrata HOM05D007285 ORTHO05D009224 1.5e-24 116.3 102 66.7
Cc02_g13540 Coffea canephora HOM05D007285 ORTHO05D009224 2.0e-24 115.9 103 65.0
BcaB07g32433 Brassica carinata HOM05D007285 ORTHO05D009224 2.6e-24 115.5 103 57.3
BcaC05g26830 Brassica carinata HOM05D007285 ORTHO05D009224 2.6e-24 115.5 92 63.0
AUR62017028 Chenopodium quinoa HOM05D007285 ORTHO05D009224 2.6e-24 115.5 112 62.5
Lsat_1_v5_gn_4_52261 Lactuca sativa HOM05D007285 ORTHO05D009224 2.6e-24 115.5 106 61.3
A09p37820 Brassica napus HOM05D007285 ORTHO05D009224 3.3e-24 115.2 92 63.0
BraA09t39294Z Brassica rapa HOM05D007285 ORTHO05D009224 3.3e-24 115.2 92 63.0
CANSAT35G0751 Cannabis sativa HOM05D007285 ORTHO05D009224 3.3e-24 115.2 102 56.9
SGA_v2.0_scaffold100G29692 Striga asiatica HOM05D007285 ORTHO05D009224 3.3e-24 115.2 104 63.5
MELO3C002614.2 Cucumis melo HOM05D007285 ORTHO05D009224 7.4e-24 114.0 69 85.5
Migut.M01131 Erythranthe guttata HOM05D007285 ORTHO05D009224 7.4e-24 114.0 113 61.9
DCAR_008032 Daucus carota HOM05D007285 ORTHO05D009224 1.3e-23 113.2 102 62.7
Thhalv10009792m.g Eutrema salsugineum HOM05D007285 ORTHO05D009224 2.2e-23 112.5 106 56.6
Nn1g04136 Nelumbo nucifera HOM05D007285 ORTHO05D009224 8.2e-23 110.5 100 62.0
Ah.09g237440 Amaranthus hybridus HOM05D007285 ORTHO05D009224 1.4e-22 109.8 103 59.2
HanXRQChr14g0435131 Helianthus annuus HOM05D007285 ORTHO05D009224 2.4e-22 109.0 100 60.0
BcaC01g00030 Brassica carinata HOM05D007285 ORTHO05D009224 4.1e-22 108.2 123 50.4
Haze_06424 Corylus avellana HOM05D007285 ORTHO05D009224 9.1e-22 107.1 80 75.0
unitig_27.g24965 Utricularia gibba HOM05D007285 ORTHO05D009224 1.6e-21 106.3 113 59.3
BolC5t31425H Brassica oleracea HOM05D007285 ORTHO05D009224 5.9e-21 104.4 110 52.7
Sc05g0007570 Simmondsia chinensis HOM05D007285 ORTHO05D009224 5.9e-21 104.4 101 60.4
QL05p041285 Quercus lobata HOM05D007285 ORTHO05D009224 1.0e-20 103.6 80 70.0
PSO541G0778 Papaver somniferum HOM05D007285 ORTHO05D009224 5.0e-20 101.3 100 56.0
TAR626G1757 Trochodendron aralioides HOM05D007285 ORTHO05D009224 6.5e-20 100.9 103 55.3
ATR0763G085 Amborella trichopoda HOM05D007285 ORTHO05D009224 1.9e-19 99.4 112 51.8
CDE01G0551 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 4.2e-19 98.2 100 53.0
Sabra04G0028300 Salix brachista HOM05D007285 ORTHO05D009224 4.2e-19 98.2 147 44.9
BcaB03g12118 Brassica carinata HOM05D007285 ORTHO05D009224 3.6e-18 95.1 73 64.4
HPP92_007016 Vanilla planifolia HOM05D007285 ORTHO05D009224 1.0e-17 93.6 101 54.5
Zm00001eb305570 Zea mays HOM05D007285 ORTHO05D009224 1.4e-17 93.2 97 57.7
SEGI_38595 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 3.0e-17 92.0 95 49.5
PGSC0003DMG401029703 Solanum tuberosum HOM05D007285 ORTHO05D009224 5.2e-17 91.3 83 65.1
vmacro15913 Vaccinium macrocarpon HOM05D007285 ORTHO05D009224 6.7e-17 90.9 83 66.3
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 1.5e-16 89.7 70 67.1
DCAR_004065 Daucus carota HOM05D007285 ORTHO05D009224 5.7e-16 87.8 75 65.3
SalBow8G3155 Salvia bowleyana HOM05D007285 ORTHO05D009224 8.2e-15 84.0 61 73.8
Pp3c8_510 Physcomitrium patens HOM05D007285 ORTHO05D009224 7.0e-14 80.9 87 54.0
Mapoly0007s0165 Marchantia polymorpha HOM05D007285 ORTHO05D009224 2.2e-12 75.9 101 46.5
Os07g0299600 Oryza sativa ssp. japonica HOM05D007285 ORTHO05D009224 1.2e-10 70.1 87 50.6
C03p74970 Brassica napus HOM05D007285 ORTHO05D009224 4.0e-09 65.1 53 60.4
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 1.7e-07 59.7 86 46.5
CDE12G0235 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 2.2e-07 59.3 100 41.0
SEGI_39568 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 4.1e-06 55.1 49 53.1


User provided reference genes

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