Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014360 Sechium edule HOM05D002504 ORTHO05D007555 2.3e-221 771.9 393 100.0
ClCG01G016490 Citrullus lanatus HOM05D002504 ORTHO05D007555 2.3e-189 665.6 393 85.2
MELO3C007518.2 Cucumis melo HOM05D002504 ORTHO05D007555 4.5e-185 651.4 393 83.0
CsaV3_6G042770 Cucumis sativus L. HOM05D002504 ORTHO05D007555 4.4e-180 634.8 389 81.7
Manes.14G075600 Manihot esculenta HOM05D002504 ORTHO05D007555 6.0e-145 518.1 392 64.8
Haze_07368 Corylus avellana HOM05D002504 ORTHO05D007555 9.6e-143 510.8 394 64.5
Duzib068G0930 Durio zibethinus HOM05D002504 ORTHO05D007555 3.4e-140 502.3 390 64.4
Cfa018981 Carpinus fangiana HOM05D002504 ORTHO05D007555 1.7e-139 500.0 394 62.9
QL10p015753 Quercus lobata HOM05D002504 ORTHO05D007555 2.7e-137 492.7 393 62.3
CiPaw.11G039400 Carya illinoinensis HOM05D002504 ORTHO05D007555 1.0e-136 490.7 377 64.5
COL.COLO4_05456 Corchorus olitorius HOM05D002504 ORTHO05D007555 1.3e-136 490.3 390 63.1
Potri.015G064300 Populus trichocarpa HOM05D002504 ORTHO05D007555 2.3e-136 489.6 392 62.5
QL10p005074 Quercus lobata HOM05D002504 ORTHO05D007555 3.9e-136 488.8 393 61.6
RcHm_v2.0_Chr7g0180701 Rosa chinensis HOM05D002504 ORTHO05D007555 5.1e-136 488.4 394 61.7
TWI38G0829 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 1.5e-135 486.9 392 62.0
Gohir.D11G032900 Gossypium hirsutum HOM05D002504 ORTHO05D007555 1.3e-134 483.8 392 61.5
Gohir.A11G029531 Gossypium hirsutum HOM05D002504 ORTHO05D007555 3.1e-133 479.2 392 61.0
Gorai.007G035700 Gossypium raimondii HOM05D002504 ORTHO05D007555 3.1e-133 479.2 392 61.0
Thecc.03G080700 Theobroma cacao HOM05D002504 ORTHO05D007555 1.2e-132 477.2 390 62.3
Dinv19925 Davidia involucrata HOM05D002504 ORTHO05D007332 1.5e-132 476.9 393 61.8
Sabra15G0090100 Salix brachista HOM05D002504 ORTHO05D007555 2.6e-132 476.1 392 60.5
TWI39G0444 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 5.8e-132 474.9 392 61.2
FAN08G0998 Fragaria x ananassa HOM05D002504 ORTHO05D007555 4.9e-131 471.9 395 59.7
Ciclev10020527m.g Citrus clementina HOM05D002504 ORTHO05D007555 6.4e-131 471.5 387 61.2
FAN04G1481 Fragaria x ananassa HOM05D002504 ORTHO05D007555 4.2e-130 468.8 395 59.2
FAN13G2799 Fragaria x ananassa HOM05D002504 ORTHO05D007555 4.2e-130 468.8 395 59.0
Dinv09821 Davidia involucrata HOM05D002504 ORTHO05D007555 1.2e-129 467.2 393 60.8
FvH4_5g15370 Fragaria vesca HOM05D002504 ORTHO05D007555 1.6e-129 466.8 395 59.5
FAN18G2091 Fragaria x ananassa HOM05D002504 ORTHO05D007555 1.3e-128 463.8 395 59.0
Prupe.5G187600 Prunus persica HOM05D002504 ORTHO05D007555 3.0e-128 462.6 394 57.9
Actinidia34980 Actinidia chinensis HOM05D002504 ORTHO05D007555 3.9e-128 462.2 393 59.3
CSS0049848 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 5.1e-128 461.8 393 59.5
Cpa.g.sc17.218 Carica papaya HOM05D002504 ORTHO05D007555 5.1e-128 461.8 390 58.7
CSS0041593 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 1.9e-127 459.9 393 59.3
THA.LOC104808328 Tarenaya hassleriana HOM05D002504 ORTHO05D007555 5.3e-125 451.8 390 56.2
TAR622G0915 Trochodendron aralioides HOM05D002504 ORTHO05D007555 7.6e-124 448.0 393 57.3
Rhsim12G0158700 Rhododendron simsii HOM05D002504 ORTHO05D007555 2.5e-122 443.0 393 57.3
TAR374G0022 Trochodendron aralioides HOM05D002504 ORTHO05D007555 2.1e-121 439.9 393 54.7
Atru.BG.192.p Acer truncatum HOM05D002504 ORTHO05D007555 6.0e-121 438.3 348 61.2
TPR.G5442 Trifolium pratense HOM05D002504 ORTHO05D007555 2.3e-120 436.4 394 55.6
Lalb_Chr12g0196751 Lupinus albus HOM05D002504 ORTHO05D007555 3.0e-120 436.0 394 55.8
Lj4g0008726 Lotus japonicus HOM05D002504 ORTHO05D007555 6.7e-120 434.9 392 55.6
CANSAT78G1429 Cannabis sativa HOM05D002504 ORTHO05D007555 1.5e-119 433.7 390 58.2
Medtr3g078030 Medicago truncatula HOM05D002504 ORTHO05D007555 2.5e-119 433.0 393 55.5
VMungo1215G2696 Vigna mungo HOM05D002504 ORTHO05D007555 2.5e-119 433.0 392 55.4
arahy.Tifrunner.gnm1.ann1.WQI89G Arachis hypogaea HOM05D002504 ORTHO05D007555 2.4e-117 426.4 393 53.9
Psat5g114360 Pisum sativum HOM05D002504 ORTHO05D007555 2.6e-116 422.9 393 54.2
arahy.Tifrunner.gnm1.ann1.AAW7H5 Arachis hypogaea HOM05D002504 ORTHO05D007555 3.4e-116 422.5 393 53.7
arahy.Tifrunner.gnm1.ann1.XHUI7I Arachis hypogaea HOM05D002504 ORTHO05D007555 3.4e-116 422.5 393 53.7
MD14G1195800 Malus domestica HOM05D002504 ORTHO05D007555 5.9e-116 421.8 396 54.5
arahy.Tifrunner.gnm1.ann1.A4B6B0 Arachis hypogaea HOM05D002504 ORTHO05D007555 1.7e-115 420.2 392 53.3
Glyma.17G097600 Glycine max HOM05D002504 ORTHO05D007555 1.7e-115 420.2 393 54.7
BraA06t24622Z Brassica rapa HOM05D002504 ORTHO05D007555 2.9e-115 419.5 389 54.5
Oeu022629.1 Olea europaea HOM05D002504 ORTHO05D007555 2.9e-115 419.5 392 52.3
Actinidia19055 Actinidia chinensis HOM05D002504 ORTHO05D007555 8.5e-115 417.9 376 57.2
Cc04_g15430 Coffea canephora HOM05D002504 ORTHO05D007555 8.5e-115 417.9 392 52.3
Phvul.003G192200 Phaseolus vulgaris HOM05D002504 ORTHO05D007555 8.5e-115 417.9 390 54.4
TPR.G1695 Trifolium pratense HOM05D002504 ORTHO05D007555 2.5e-114 416.4 394 53.8
A06p15070 Brassica napus HOM05D002504 ORTHO05D007555 3.2e-114 416.0 389 54.5
Eucgr.A00822 Eucalyptus grandis HOM05D002504 ORTHO05D007555 3.2e-114 416.0 389 55.5
PGR083G1477 Punica granatum HOM05D002504 ORTHO05D007555 7.2e-114 414.8 393 54.7
Thhalv10007868m.g Eutrema salsugineum HOM05D002504 ORTHO05D007555 1.2e-113 414.1 390 56.2
CARHR019500 Cardamine hirsuta HOM05D002504 ORTHO05D007555 4.6e-113 412.1 390 55.4
AT1G18850 Arabidopsis thaliana HOM05D002504 ORTHO05D007555 2.3e-112 409.8 395 54.9
Ca_16191_v3 Cicer arietinum L. HOM05D002504 ORTHO05D007555 2.3e-112 409.8 394 53.3
Carub.0001s1850 Capsella rubella HOM05D002504 ORTHO05D007555 6.7e-112 408.3 411 52.6
Nn3g16999 Nelumbo nucifera HOM05D002504 ORTHO05D007555 2.5e-111 406.4 393 53.7
SHI03355 Sapria himalayana HOM05D002504 ORTHO05D007555 5.7e-111 405.2 393 52.7
AL1G31390 Arabidopsis lyrata HOM05D002504 ORTHO05D007555 9.7e-111 404.4 395 54.4
SalBow5G4081 Salvia bowleyana HOM05D002504 ORTHO05D007555 5.9e-108 395.2 392 49.5
Aa31LG7G3620 Aethionema arabicum HOM05D002504 ORTHO05D007555 1.3e-107 394.0 390 52.1
BcaC05g25787 Brassica carinata HOM05D002504 ORTHO05D007555 2.9e-107 392.9 417 50.1
C05p17270 Brassica napus HOM05D002504 ORTHO05D007555 2.9e-107 392.9 417 50.4
BolC5t30427H Brassica oleracea HOM05D002504 ORTHO05D007555 2.9e-107 392.9 417 50.4
Sp1g16830 Schrenkiella parvula HOM05D002504 ORTHO05D007555 1.1e-106 391.0 418 51.0
Sc10g0009970 Simmondsia chinensis HOM05D002504 ORTHO05D007555 3.6e-105 386.0 394 51.5
Glyma.05G029300 Glycine max HOM05D002504 ORTHO05D007555 1.0e-104 384.4 394 51.8
Lsat_1_v5_gn_1_10961 Lactuca sativa HOM05D002504 ORTHO05D007555 1.1e-103 380.9 406 49.5
Aqoxy3G03288 Aquilegia oxysepala HOM05D002504 ORTHO05D007555 1.7e-102 377.1 396 50.5
BcaB07g31903 Brassica carinata HOM05D002504 ORTHO05D007555 1.2e-100 370.9 419 50.4
MSTRG.4344 Avicennia marina HOM05D002504 ORTHO05D007555 3.4e-100 369.4 343 52.8
PGSC0003DMG400033071 Solanum tuberosum HOM05D002504 ORTHO05D007555 1.0e-99 367.9 390 49.2
Solyc06g071010.4 Solanum lycopersicum HOM05D002504 ORTHO05D007555 1.9e-98 363.6 392 48.2
Peaxi162Scf00013g00007 Petunia axillaris HOM05D002504 ORTHO05D007555 4.2e-98 362.5 394 49.0
Sopen06g027310 Solanum pennellii HOM05D002504 ORTHO05D007555 7.2e-98 361.7 392 47.7
Nitab4.5_0000269g0140 Nicotiana tabacum HOM05D002504 ORTHO05D007555 2.7e-97 359.8 392 48.0
PSO591G0510 Papaver somniferum HOM05D002504 ORTHO05D007555 8.8e-96 354.8 392 48.0
DCAR_001955 Daucus carota HOM05D002504 ORTHO05D007555 4.4e-95 352.4 398 48.0
Migut.I00134 Erythranthe guttata HOM05D002504 ORTHO05D007555 5.7e-95 352.1 397 45.6
CAN.G628.37 Capsicum annuum HOM05D002504 ORTHO05D007555 7.4e-95 351.7 394 48.5
Ah.02g112510 Amaranthus hybridus HOM05D002504 ORTHO05D007555 1.7e-94 350.5 399 47.6
Nitab4.5_0007394g0010 Nicotiana tabacum HOM05D002504 ORTHO05D007555 1.7e-94 350.5 392 47.2
EL10As5g23568 Beta vulgaris HOM05D002504 ORTHO05D007555 8.2e-94 348.2 402 49.0
MBI03_g18947_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 8.2e-94 348.2 397 47.4
PSO832G2768 Papaver somniferum HOM05D002504 ORTHO05D007555 8.2e-94 348.2 392 46.9
GSVIVG01008049001 Vitis vinifera HOM05D002504 ORTHO05D007555 1.4e-93 347.4 347 53.0
DCAR_001117 Daucus carota HOM05D002504 ORTHO05D007555 4.1e-93 345.9 389 47.6
AUR62038455 Chenopodium quinoa HOM05D002504 ORTHO05D007555 3.8e-91 339.3 404 46.8
AUR62042153 Chenopodium quinoa HOM05D002504 ORTHO05D007555 2.5e-90 336.7 404 46.3
Lj5P114T15 Lonicera japonica HOM05D002504 ORTHO05D007555 1.0e-88 331.3 263 62.0
HanXRQChr06g0178031 Helianthus annuus HOM05D002504 ORTHO05D007555 1.4e-88 330.9 391 45.8
HPP92_004873 Vanilla planifolia HOM05D002504 ORTHO05D007555 1.2e-87 327.8 397 44.1
Lj7P436T44 Lonicera japonica HOM05D002504 ORTHO05D007555 2.6e-87 326.6 315 55.6
unitig_52.g17495 Utricularia gibba HOM05D002504 ORTHO05D007555 3.7e-86 322.8 392 41.8
MBI11_g21312_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 4.8e-86 322.4 396 46.0
PSO063G6525 Papaver somniferum HOM05D002504 ORTHO05D007555 6.3e-86 322.0 392 45.9
Nn5g27262 Nelumbo nucifera HOM05D002504 ORTHO05D007555 8.2e-86 321.6 272 58.1
MBI03_g28522_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 7.0e-85 318.5 396 44.4
CDE07G0237 Ceratophyllum demersum HOM05D002504 ORTHO05D007555 4.5e-84 315.8 373 43.7
SGA_v2.0_scaffold56G20046 Striga asiatica HOM05D002504 ORTHO05D007555 6.8e-80 302.0 333 48.3
ECA236G0190 Erigeron canadensis HOM05D002504 ORTHO05D007332 3.7e-70 269.6 294 47.3
Dinv02434 Davidia involucrata HOM05D002504 ORTHO05D007555 6.6e-67 258.8 179 72.1
ATR1120G016 Amborella trichopoda HOM05D002504 ORTHO05D007555 3.2e-61 240.0 419 34.8
Os01g0112100 Oryza sativa ssp. japonica HOM05D002504 ORTHO05D007555 3.6e-41 173.3 236 38.1
Zm00001eb126250 Zea mays HOM05D002504 ORTHO05D007555 1.2e-36 158.3 232 38.4
Duzib205G0461 Durio zibethinus HOM05D002504 ORTHO05D007555 7.8e-36 155.6 311 35.7
Zm00001eb334590 Zea mays HOM05D002504 ORTHO05D007555 8.7e-35 152.1 232 37.1
SEGI_18201 Sequoiadendron giganteum HOM05D002504 ORTHO05D007555 1.2e-33 148.3 401 29.7
Aa31LG9G8990 Aethionema arabicum HOM05D000710 ORTHO05D000336 5.4e-29 132.9 249 34.5
Ciclev10033409m.g Citrus clementina HOM05D002504 ORTHO05D007555 9.6e-26 122.1 180 39.4
BcaB07g32205 Brassica carinata HOM05D002504 ORTHO05D007555 1.3e-25 121.7 253 34.0
Sabra12G0030300 Salix brachista HOM05D002504 ORTHO05D007555 2.1e-25 120.9 179 44.7
Mapoly0028s0021 Marchantia polymorpha HOM05D002504 ORTHO05D007555 1.5e-23 114.8 418 25.1
Nn5g27265 Nelumbo nucifera HOM05D002504 ORTHO05D007555 4.5e-23 113.2 437 27.2
Pp3c1_3820 Physcomitrium patens HOM05D002504 ORTHO05D007555 5.4e-21 106.3 366 25.1
Pp3c1_3850 Physcomitrium patens HOM05D002504 ORTHO05D007555 5.4e-21 106.3 366 25.1
AagrBONN_evm.TU.Sc2ySwM_369.370 Anthoceros agrestis HOM05D002504 ORTHO05D007555 7.1e-21 105.9 434 25.3
SMO367G0630 Selaginella moellendorffii HOM05D002504 ORTHO05D007555 3.2e-13 80.5 252 27.4
arahy.Tifrunner.gnm1.ann1.8LRZ9F Arachis hypogaea HOM05D002504 ORTHO05D007555 1.6e-12 78.2 106 39.6
CBR_g26261 Chara braunii HOM05D002504 ORTHO05D007555 5.6e-10 69.7 268 24.3
COL.COLO4_31086 Corchorus olitorius HOM05D002504 ORTHO05D007555 3.1e-08 63.9 64 48.4


User provided reference genes

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