Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 0.0e+00 1355.5 700 100.0
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 3.2e-298 1028.1 830 71.6
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 1.3e-294 1016.1 724 78.9
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 4.9e-291 1004.2 723 78.3
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 4.9e-283 977.6 721 76.7
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 1.0e-158 564.7 725 50.5
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 1.8e-155 553.9 724 49.7
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 3.9e-155 552.7 729 50.9
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 3.9e-155 552.7 734 50.1
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 7.4e-154 548.5 731 47.9
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 1.3e-153 547.7 723 49.9
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 1.4e-149 534.3 731 48.2
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 3.2e-149 533.1 728 47.3
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 8.2e-145 518.5 735 47.8
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 8.2e-145 518.5 727 49.9
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 1.7e-142 510.8 732 46.4
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.1e-141 508.1 738 48.1
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 1.9e-141 507.3 717 46.7
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 4.2e-141 506.1 740 47.0
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 9.4e-141 505.0 735 47.8
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 2.3e-139 500.4 725 46.9
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 3.9e-139 499.6 725 46.6
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 5.1e-139 499.2 731 48.3
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 8.8e-139 498.4 726 44.8
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 4.4e-138 496.1 727 46.1
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 3.7e-137 493.0 720 45.4
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 4.1e-136 489.6 653 47.9
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 4.1e-136 489.6 724 45.4
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 6.9e-136 488.8 721 46.0
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 4.5e-135 486.1 724 47.5
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 1.1e-133 481.5 720 45.1
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 4.2e-133 479.6 613 51.1
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 9.4e-133 478.4 729 46.2
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 1.2e-132 478.0 728 45.5
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 1.2e-132 478.0 711 45.4
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.6e-132 476.5 729 46.2
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 4.7e-132 476.1 718 44.8
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 4.7e-132 476.1 719 46.0
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 3.9e-131 473.0 718 45.5
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.9e-131 473.0 734 46.6
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 5.2e-131 472.6 733 43.8
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 3.3e-130 469.9 734 43.9
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 4.4e-130 469.5 720 45.1
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 9.7e-130 468.4 749 45.1
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.3e-129 468.0 729 46.5
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 4.8e-129 466.1 773 42.7
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 6.3e-129 465.7 713 44.3
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 6.3e-129 465.7 747 44.8
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 2.0e-127 460.7 720 44.2
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 8.5e-126 455.3 740 42.4
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 5.5e-125 452.6 706 43.9
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 6.1e-124 449.1 731 45.3
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 1.8e-123 447.6 725 44.8
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 6.7e-123 445.7 739 41.5
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 1.2e-122 444.9 734 43.3
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 2.6e-122 443.7 720 45.0
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 2.2e-121 440.7 737 44.2
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 7.2e-117 425.6 729 43.1
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 1.2e-116 424.9 727 42.0
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 2.7e-116 423.7 750 43.5
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 1.5e-114 417.9 742 41.0
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 9.8e-114 415.2 571 49.0
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 2.4e-112 410.6 744 41.5
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 7.0e-112 409.1 744 40.1
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 7.2e-109 399.1 727 40.0
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 1.2e-108 398.3 659 42.6
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.8e-107 394.4 664 45.2
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 3.0e-107 393.7 731 40.5
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 4.0e-107 393.3 730 39.6
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 3.4e-106 390.2 827 38.0
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 4.4e-106 389.8 796 37.7
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 7.5e-106 389.0 724 41.0
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 2.2e-105 387.5 733 39.8
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 8.3e-105 385.6 727 38.5
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 1.4e-104 384.8 723 40.0
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 2.4e-104 384.0 729 39.9
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 3.8e-102 376.7 715 39.3
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 8.6e-102 375.6 733 37.9
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 2.5e-101 374.0 730 38.9
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 4.7e-100 369.8 739 37.6
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 3.0e-99 367.1 724 39.2
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 5.2e-99 366.3 728 37.9
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 7.5e-98 362.5 724 38.5
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 9.8e-98 362.1 724 38.7
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.4e-96 358.2 701 38.9
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 2.4e-96 357.5 742 37.5
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 3.2e-96 357.1 727 38.5
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 4.1e-96 356.7 760 38.3
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 5.4e-96 356.3 730 39.2
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 5.4e-96 356.3 713 37.9
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 2.0e-95 354.4 727 38.9
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 2.0e-95 354.4 727 38.9
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 2.3e-94 350.9 724 39.1
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 5.0e-94 349.7 732 38.1
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 4.7e-92 343.2 645 39.2
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 1.1e-91 342.0 722 36.3
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 1.8e-91 341.3 716 36.7
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 1.2e-90 338.6 817 35.0
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 1.2e-90 338.6 658 40.4
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 2.0e-90 337.8 759 36.6
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 2.2e-89 334.3 801 31.8
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 8.3e-89 332.4 664 38.7
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 1.9e-88 331.3 537 45.3
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 1.3e-86 325.1 779 34.1
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 1.7e-86 324.7 668 37.7
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 3.0e-86 323.9 793 35.4
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 3.9e-86 323.6 648 40.1
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 2.8e-84 317.4 722 36.8
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 2.8e-84 317.4 696 36.4
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 4.0e-83 313.5 699 35.9
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 5.2e-83 313.2 702 36.5
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 6.8e-83 312.8 701 36.2
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 6.8e-83 312.8 698 36.0
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 8.9e-83 312.4 677 35.5
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 1.2e-82 312.0 704 36.4
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 1.2e-82 312.0 703 36.7
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 5.4e-80 303.1 720 36.9
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 1.2e-79 302.0 642 38.8
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 1.2e-79 302.0 739 37.3
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 2.7e-79 300.8 699 35.3
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 1.0e-78 298.9 702 35.3
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 1.7e-78 298.1 701 35.2
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 5.1e-78 296.6 734 33.9
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 8.6e-78 295.8 697 35.3
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 3.3e-77 293.9 703 35.6
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 1.6e-76 291.6 701 35.2
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 4.7e-76 290.0 701 35.0
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 3.1e-75 287.3 703 33.4
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 2.6e-74 284.3 676 36.5
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 6.4e-73 279.6 704 33.8
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 2.4e-72 277.7 701 34.0
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 4.1e-72 276.9 732 33.2
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 3.3e-69 267.3 592 36.3
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 2.1e-68 264.6 291 51.5
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 2.6e-66 257.7 892 29.1
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 4.9e-65 253.4 308 47.1
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 4.3e-61 240.4 273 50.9
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 9.6e-61 239.2 730 31.2
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 1.1e-59 235.7 728 32.3
CSS0005394 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 7.1e-56 223.0 448 39.3
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 2.1e-52 211.5 374 37.2
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 2.8e-52 211.1 368 39.9
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.8e-51 208.4 279 49.1
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 6.9e-51 206.5 589 30.4
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 1.2e-50 205.7 637 30.8
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 4.5e-50 203.8 598 29.6
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 3.2e-48 197.6 307 41.7
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 3.5e-47 194.1 650 29.2
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 1.1e-45 189.1 608 28.1
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 5.6e-45 186.8 303 44.2
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.6e-44 185.3 331 37.5
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 2.1e-44 184.9 121 73.6
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 2.1e-44 184.9 506 31.2
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 6.5e-41 173.3 506 34.2
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 1.9e-37 161.8 283 36.7
MBI17_g24687_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 3.9e-30 137.5 453 33.1
MBI18_g29423_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 8.8e-30 136.3 728 30.5
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 7.4e-29 133.3 113 62.8
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 9.4e-24 116.3 183 38.3
SEGI_33334 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.8e-22 112.1 262 32.1
Ca_13872_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 3.9e-22 110.9 437 31.6
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 1.3e-17 95.9 140 42.1
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 1.7e-17 95.5 180 33.3
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 5.0e-17 94.0 164 42.7
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 1.1e-16 92.8 183 33.9
PGSC0003DMG400029919 Solanum tuberosum HOM05D003626 ORTHO05D004255 1.9e-16 92.0 454 28.9
TAR375G0355 Trochodendron aralioides HOM05D003626 ORTHO05D004255 5.2e-14 84.0 63 66.7
ECA233G5443 Erigeron canadensis HOM05D003626 ORTHO05D004255 3.3e-13 81.3 67 56.7
TAR636G0984 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.2e-12 78.6 55 72.7
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 3.1e-11 74.7 61 62.3
TAR375G0736 Trochodendron aralioides HOM05D003626 ORTHO05D004255 3.1e-11 74.7 103 49.5
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 2.5e-08 65.1 126 43.7
HPP92_001484 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.6e-07 62.4 60 45.0
AagrBONN_evm.TU.Sc2ySwM_362.2615 Anthoceros agrestis HOM05D003626 ORTHO05D004255 6.1e-07 60.5 136 34.6


User provided reference genes

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