Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014306 Sechium edule HOM05D007867 ORTHO05D009953 4.8e-26 120.6 68 100.0
Thecc.01G083600 Theobroma cacao HOM05D007867 ORTHO05D009953 7.5e-19 96.7 64 92.2
Dinv36978 Davidia involucrata HOM05D007867 ORTHO05D009953 8.3e-18 93.2 67 83.6
FvH4_1g18950 Fragaria vesca HOM05D007867 ORTHO05D009953 2.4e-17 91.7 70 82.9
Nn1g05680 Nelumbo nucifera HOM05D007867 ORTHO05D009953 2.4e-17 91.7 64 89.1
RcHm_v2.0_Chr2g0109971 Rosa chinensis HOM05D007867 ORTHO05D009953 1.6e-16 89.0 68 82.4
vmacro19595 Vaccinium macrocarpon HOM05D007867 ORTHO05D009953 1.6e-16 89.0 68 82.4
Actinidia36378 Actinidia chinensis HOM05D007867 ORTHO05D009953 3.5e-16 87.8 66 68.2
Sc03g0000590 Simmondsia chinensis HOM05D007867 ORTHO05D009953 1.0e-15 86.3 69 81.2
Gohir.D11G214500 Gossypium hirsutum HOM05D007867 ORTHO05D009953 1.3e-15 85.9 64 84.4
Lalb_Chr09g0325761 Lupinus albus HOM05D007867 ORTHO05D009953 1.7e-15 85.5 66 84.8
Gohir.A11G209001 Gossypium hirsutum HOM05D007867 ORTHO05D009953 2.9e-15 84.7 64 81.2
CiPaw.08G145800 Carya illinoinensis HOM05D007867 ORTHO05D009953 6.5e-15 83.6 62 85.5
MD10G1057100 Malus domestica HOM05D007867 ORTHO05D009953 8.5e-15 83.2 65 81.5
ATR0800G156 Amborella trichopoda HOM05D007867 ORTHO05D009953 3.2e-14 81.3 64 85.9
Zm00001eb061250 Zea mays HOM05D007867 ORTHO05D009953 3.2e-14 81.3 67 79.1
CiPaw.08G145600 Carya illinoinensis HOM05D007867 ORTHO05D009953 5.5e-14 80.5 67 77.6
Lj2g0008804 Lotus japonicus HOM05D007867 ORTHO05D009953 3.6e-13 77.8 73 74.0
Ca_13472_v3 Cicer arietinum L. HOM05D007867 ORTHO05D009953 4.7e-13 77.4 65 75.4
RhsimUnG0066800 Rhododendron simsii HOM05D007867 ORTHO05D009953 6.1e-13 77.0 79 55.7
CiPaw.05G026800 Carya illinoinensis HOM05D007867 ORTHO05D009953 1.4e-12 75.9 68 75.0
Manes.13G104200 Manihot esculenta HOM05D007867 ORTHO05D009953 1.4e-12 75.9 64 78.1
Nn5g29770 Nelumbo nucifera HOM05D007867 ORTHO05D009953 1.4e-12 75.9 64 78.1
CiPaw.07G042200 Carya illinoinensis HOM05D007867 ORTHO05D009953 1.8e-12 75.5 61 80.3
Gohir.D03G034400 Gossypium hirsutum HOM05D007867 ORTHO05D009953 1.8e-12 75.5 64 76.6
Gorai.003G036100 Gossypium raimondii HOM05D007867 ORTHO05D009953 1.8e-12 75.5 64 76.6
Oeu033792.2 Olea europaea HOM05D007867 ORTHO05D009953 3.0e-12 74.7 43 83.7
Hund00401 Selenicereus undatus HOM05D007867 ORTHO05D009953 3.0e-12 74.7 73 72.6
GSVIVG01006775001 Vitis vinifera HOM05D007867 ORTHO05D009953 3.0e-12 74.7 64 76.6
CiPaw.08G128500 Carya illinoinensis HOM05D007867 ORTHO05D009953 4.0e-12 74.3 65 67.7
EL10Ac9g22129 Beta vulgaris HOM05D007867 ORTHO05D009953 1.5e-11 72.4 71 69.0
CSS0005733 Camellia sinensis var. sinensis HOM05D007867 ORTHO05D009953 1.5e-11 72.4 42 85.7
Cc02_g20570 Coffea canephora HOM05D007867 ORTHO05D009953 2.0e-11 72.0 69 72.5
FAN28G0366 Fragaria x ananassa HOM05D007867 ORTHO05D009953 2.0e-11 72.0 45 82.2
Os07g0191650 Oryza sativa ssp. japonica HOM05D007867 ORTHO05D009953 2.0e-11 72.0 75 70.7
TPR.G37059 Trifolium pratense HOM05D007867 ORTHO05D009953 2.6e-11 71.6 67 59.7
Glyma.09G202700 Glycine max HOM05D007867 ORTHO05D009953 6.3e-10 67.0 68 72.1
Hma1.2p1_1119F.1_g259180 Hydrangea macrophylla HOM05D007867 ORTHO05D009953 1.8e-09 65.5 47 74.5
Cc07_g07830 Coffea canephora HOM05D007867 ORTHO05D009953 3.1e-09 64.7 69 68.1
Oeu014206.1 Olea europaea HOM05D007867 ORTHO05D009953 4.1e-09 64.3 47 66.0
Medtr5g030870 Medicago truncatula HOM05D007867 ORTHO05D009953 9.1e-09 63.2 65 69.2
Solyc01g106300.3 Solanum lycopersicum HOM05D007867 ORTHO05D009953 2.7e-08 61.6 64 62.5
DCAR_021457 Daucus carota HOM05D000419 ORTHO05D000692 4.5e-08 60.8 45 71.1
Lalb_Chr16g0383101 Lupinus albus HOM05D007867 ORTHO05D009953 4.5e-08 60.8 45 77.8
ClCG09G016440 Citrullus lanatus HOM05D007867 ORTHO05D009953 7.7e-08 60.1 45 71.1
Gohir.A05G401300 Gossypium hirsutum HOM05D007867 ORTHO05D009953 7.7e-08 60.1 59 61.0
Potri.015G025600 Populus trichocarpa HOM05D007867 ORTHO05D009953 7.7e-08 60.1 63 55.6
Haze_03934 Corylus avellana HOM05D007867 ORTHO05D009953 1.3e-07 59.3 64 68.8
Gorai.007G230100 Gossypium raimondii HOM05D007867 ORTHO05D009953 1.3e-07 59.3 64 68.8
Hma1.2p1_0908F.1_g235690 Hydrangea macrophylla HOM05D007867 ORTHO05D009953 1.7e-07 58.9 68 63.2
Zm00001eb302470 Zea mays HOM05D007867 ORTHO05D009953 1.7e-07 58.9 76 65.8
TPR.G40500 Trifolium pratense HOM05D007867 ORTHO05D009953 8.6e-07 56.6 29 93.1
FAN23G2231 Fragaria x ananassa HOM05D007867 ORTHO05D009953 1.1e-06 56.2 77 46.8
Cpa.g.c33237.1 Carica papaya HOM05D007867 ORTHO05D009953 1.5e-06 55.8 61 68.9
Eucgr.I02581 Eucalyptus grandis HOM05D007867 ORTHO05D009953 1.5e-06 55.8 49 63.3
CiPaw.06G161100 Carya illinoinensis HOM05D007867 ORTHO05D009953 3.3e-06 54.7 50 60.0
Ciclev10027423m.g Citrus clementina HOM05D007867 ORTHO05D009953 4.2e-06 54.3 65 66.2
Gohir.A02G146200 Gossypium hirsutum HOM05D007867 ORTHO05D009953 7.2e-06 53.5 64 64.1


User provided reference genes

Program Settings