Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014302 Sechium edule HOM05D003533 ORTHO05D004009 7.8e-29 130.2 87 100.0
CsaV3_1G001820 Cucumis sativus L. HOM05D003533 ORTHO05D004009 1.2e-16 89.7 81 69.1
MELO3C017124.2 Cucumis melo HOM05D003533 ORTHO05D004009 5.8e-16 87.4 82 61.0
ClCG06G016690 Citrullus lanatus HOM05D003533 ORTHO05D004009 3.0e-12 75.1 52 75.0
Sed0002579 Sechium edule HOM05D003533 ORTHO05D004009 7.3e-11 70.5 90 48.9
Duzib084G0973 Durio zibethinus HOM05D003533 ORTHO05D004009 1.3e-10 69.7 79 49.4
QL10p012332 Quercus lobata HOM05D003533 ORTHO05D004009 1.8e-09 65.9 88 43.2
TWI81G0654 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 2.4e-09 65.5 87 44.8
Thecc.03G004000 Theobroma cacao HOM05D003533 ORTHO05D004009 5.8e-08 60.8 79 43.0
PGR083G0433 Punica granatum HOM05D003533 ORTHO05D004009 1.7e-07 59.3 90 55.6
TWI15G0955 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 2.9e-07 58.5 82 41.5
Thecc.03G004200 Theobroma cacao HOM05D003533 ORTHO05D004009 3.8e-07 58.2 79 41.8
Gohir.D12G053600 Gossypium hirsutum HOM05D019532 ORTHO05D025681 6.4e-07 57.4 85 64.7
Manes.06G100300 Manihot esculenta HOM05D003533 ORTHO05D004009 6.4e-07 57.4 89 44.9
Potri.015G070700 Populus trichocarpa HOM05D003533 ORTHO05D004009 6.4e-07 57.4 89 64.0
CiPaw.12G022900 Carya illinoinensis HOM05D003533 ORTHO05D004009 8.4e-07 57.0 89 41.6
COL.COLO4_21432 Corchorus olitorius HOM05D003533 ORTHO05D004009 1.4e-06 56.2 85 38.8
Manes.14G070400 Manihot esculenta HOM05D003533 ORTHO05D004009 1.4e-06 56.2 89 43.8
FAN18G0586 Fragaria x ananassa HOM05D003533 ORTHO05D004009 2.4e-06 55.5 79 43.0
Lsat_1_v5_gn_1_12101 Lactuca sativa HOM05D003533 ORTHO05D004009 3.2e-06 55.1 89 37.1
PSO013G0048 Papaver somniferum HOM05D003533 ORTHO05D004009 5.4e-06 54.3 90 37.8
THA.LOC104821473 Tarenaya hassleriana HOM05D003533 ORTHO05D004009 7.1e-06 53.9 83 53.0
TAR622G1413 Trochodendron aralioides HOM05D003533 ORTHO05D004009 7.1e-06 53.9 89 40.4
Gorai.008G056900 Gossypium raimondii HOM05D019532 ORTHO05D025681 9.3e-06 53.5 80 65.0


User provided reference genes

Program Settings