Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011985 Sechium edule HOM05D000955 ORTHO05D001429 3.9e-34 147.5 72 100.0
Sed0014291 Sechium edule HOM05D000955 ORTHO05D001429 3.9e-34 147.5 72 100.0
Sed0019635 Sechium edule HOM05D000955 ORTHO05D001429 3.9e-34 147.5 72 100.0
Sed0024179 Sechium edule HOM05D000955 ORTHO05D001429 3.9e-34 147.5 72 100.0
Sed0004971 Sechium edule HOM05D000955 ORTHO05D001429 2.0e-30 135.2 72 88.9
MELO3C026462.2 Cucumis melo HOM05D000955 ORTHO05D001429 9.0e-23 109.8 72 70.8
ClCG08G015800 Citrullus lanatus HOM05D000955 ORTHO05D001429 7.6e-22 106.7 72 69.4
ClCG11G000380 Citrullus lanatus HOM05D000955 ORTHO05D001429 3.8e-21 104.4 72 69.4
Sed0008372 Sechium edule HOM05D000955 ORTHO05D001429 1.9e-20 102.1 72 66.7
ClCG08G015790 Citrullus lanatus HOM05D000955 ORTHO05D001429 2.5e-20 101.7 72 65.3
Sed0009213 Sechium edule HOM05D000955 ORTHO05D001429 2.5e-20 101.7 72 66.7
Sed0023504 Sechium edule HOM05D000955 ORTHO05D001429 2.5e-20 101.7 72 66.7
CsaV3_2G027970 Cucumis sativus L. HOM05D000955 ORTHO05D001429 3.2e-20 101.3 72 63.9
Sed0014774 Sechium edule HOM05D000955 ORTHO05D001429 9.3e-20 99.8 72 65.3
Sed0013848 Sechium edule HOM05D000955 ORTHO05D001429 1.2e-19 99.4 72 63.9
CsaV3_5G015470 Cucumis sativus L. HOM05D000955 ORTHO05D001429 2.1e-19 98.6 64 70.3
MELO3C010876.2 Cucumis melo HOM05D000955 ORTHO05D001429 2.7e-19 98.2 72 63.9
Sed0019916 Sechium edule HOM05D000955 ORTHO05D001429 3.9e-18 94.4 71 57.7
Sed0027202 Sechium edule HOM05D000955 ORTHO05D001429 8.7e-18 93.2 70 60.0
Sed0014822 Sechium edule HOM05D000955 ORTHO05D001429 2.5e-17 91.7 73 63.0
MELO3C010875.2 Cucumis melo HOM05D000955 ORTHO05D001429 4.3e-17 90.9 71 57.7
CsaV3_2G027960 Cucumis sativus L. HOM05D000955 ORTHO05D001429 4.3e-17 90.9 71 57.7
ClCG08G015850 Citrullus lanatus HOM05D000955 ORTHO05D001429 2.2e-16 88.6 71 56.3
MELO3C010869.2 Cucumis melo HOM05D000955 ORTHO05D001429 3.7e-16 87.8 71 54.9
ClCG08G015820 Citrullus lanatus HOM05D000955 ORTHO05D001429 6.3e-16 87.0 71 56.3
Sed0005408 Sechium edule HOM05D000955 ORTHO05D001429 8.2e-16 86.7 72 54.2
CsaV3_2G027880 Cucumis sativus L. HOM05D000955 ORTHO05D001429 4.1e-15 84.3 71 53.5
Sed0024187 Sechium edule HOM05D000955 ORTHO05D001429 5.3e-15 84.0 66 54.5
Sed0015785 Sechium edule HOM05D000955 ORTHO05D001429 9.0e-15 83.2 66 54.5
Sed0017113 Sechium edule HOM05D000955 ORTHO05D001429 3.4e-14 81.3 71 52.1
Sed0008712 Sechium edule HOM05D000955 ORTHO05D001429 2.2e-13 78.6 70 50.0
ClCG08G015840 Citrullus lanatus HOM05D000955 ORTHO05D001429 6.5e-13 77.0 66 54.5
Sed0008843 Sechium edule HOM05D000955 ORTHO05D001429 6.5e-13 77.0 71 46.5
QL02p005180 Quercus lobata HOM05D000955 ORTHO05D001429 3.2e-12 74.7 64 53.1
Sed0019946 Sechium edule HOM05D000955 ORTHO05D001429 9.4e-12 73.2 68 51.5
QL02p005235 Quercus lobata HOM05D000955 ORTHO05D001429 1.6e-11 72.4 67 52.2
Cfa018535 Carpinus fangiana HOM05D000955 ORTHO05D001429 2.1e-11 72.0 67 55.2
MELO3C010868.2 Cucumis melo HOM05D000955 ORTHO05D001429 2.1e-11 72.0 66 48.5
CsaV3_2G027870 Cucumis sativus L. HOM05D000955 ORTHO05D001429 2.1e-11 72.0 66 48.5
ClCG08G015860 Citrullus lanatus HOM05D000955 ORTHO05D001429 4.6e-11 70.9 66 48.5
CsaV3_2G027950 Cucumis sativus L. HOM05D000955 ORTHO05D001429 4.6e-11 70.9 70 47.1
COL.COLO4_26489 Corchorus olitorius HOM05D000955 ORTHO05D001429 7.9e-11 70.1 67 50.7
Sed0019911 Sechium edule HOM05D000955 ORTHO05D001429 7.9e-11 70.1 66 45.5
QL02p005175 Quercus lobata HOM05D000955 ORTHO05D001429 1.0e-10 69.7 64 51.6
QL02p005214 Quercus lobata HOM05D000023 ORTHO05D000014 3.0e-10 68.2 67 47.8
Cfa018534 Carpinus fangiana HOM05D000955 ORTHO05D001429 3.9e-10 67.8 67 47.8
CsaV3_2G027890 Cucumis sativus L. HOM05D000955 ORTHO05D001429 5.1e-10 67.4 71 43.7
QL02p005194 Quercus lobata HOM05D000955 ORTHO05D001429 5.1e-10 67.4 67 43.3
Thecc.08G009700 Theobroma cacao HOM05D000955 ORTHO05D001429 5.1e-10 67.4 67 50.7
CiPaw.15G060000 Carya illinoinensis HOM05D000955 ORTHO05D001429 8.8e-10 66.6 67 49.3
Gorai.010G019300 Gossypium raimondii HOM05D000955 ORTHO05D001429 8.8e-10 66.6 66 50.0
QL02p005131 Quercus lobata HOM05D000955 ORTHO05D001429 8.8e-10 66.6 64 50.0
MELO3C010874.2 Cucumis melo HOM05D000955 ORTHO05D001429 1.1e-09 66.2 70 44.3
Dinv35967 Davidia involucrata HOM05D000955 ORTHO05D001429 1.1e-09 66.2 66 51.5
Gohir.A03G076900 Gossypium hirsutum HOM05D000955 ORTHO05D001429 1.1e-09 66.2 67 49.3
COL.COLO4_26496 Corchorus olitorius HOM05D000955 ORTHO05D001429 1.5e-09 65.9 71 46.5
Gorai.005G102700 Gossypium raimondii HOM05D000955 ORTHO05D001429 1.5e-09 65.9 67 49.3
Nitab4.5_0001101g0050 Nicotiana tabacum HOM05D000955 ORTHO05D001429 1.5e-09 65.9 66 50.0
Sed0026745 Sechium edule HOM05D000955 ORTHO05D001429 2.0e-09 65.5 63 41.3
Haze_17535 Corylus avellana HOM05D000955 ORTHO05D001429 2.5e-09 65.1 67 46.3
Thecc.08G009100 Theobroma cacao HOM05D000955 ORTHO05D001429 4.3e-09 64.3 64 50.0
COL.COLO4_26493 Corchorus olitorius HOM05D000955 ORTHO05D001429 7.4e-09 63.5 67 47.8
CsaV3_5G015490 Cucumis sativus L. HOM05D000955 ORTHO05D001429 7.4e-09 63.5 42 64.3
Sed0010424 Sechium edule HOM05D000955 ORTHO05D001429 7.4e-09 63.5 63 39.7
Sed0019585 Sechium edule HOM05D000955 ORTHO05D001429 7.4e-09 63.5 63 41.3
Nitab4.5_0000686g0110 Nicotiana tabacum HOM05D000955 ORTHO05D003340 9.7e-09 63.2 66 48.5
Sed0024453 Sechium edule HOM05D000955 ORTHO05D001429 9.7e-09 63.2 66 39.4
Gohir.A06G018101 Gossypium hirsutum HOM05D000955 ORTHO05D001429 1.3e-08 62.8 66 48.5
CsaV3_5G015500 Cucumis sativus L. HOM05D000955 ORTHO05D001429 1.7e-08 62.4 41 61.0
Gohir.D02G091600 Gossypium hirsutum HOM05D000955 ORTHO05D001429 1.7e-08 62.4 67 46.3
Manes.05G173100 Manihot esculenta HOM05D000955 ORTHO05D001429 1.7e-08 62.4 67 44.8
ClCG08G015810 Citrullus lanatus HOM05D000955 ORTHO05D001429 2.2e-08 62.0 71 40.8
Gohir.D06G016400 Gossypium hirsutum HOM05D000955 ORTHO05D001429 2.8e-08 61.6 66 47.0
Potri.008G079132 Populus trichocarpa HOM05D000955 ORTHO05D001429 3.7e-08 61.2 67 46.3
Sed0022222 Sechium edule HOM05D000955 ORTHO05D001429 3.7e-08 61.2 63 39.7
Solyc04g079080.2 Solanum lycopersicum HOM05D000955 ORTHO05D003340 3.7e-08 61.2 66 47.0
Sopen04g032680 Solanum pennellii HOM05D000955 ORTHO05D001429 3.7e-08 61.2 66 47.0
Thecc.08G009300 Theobroma cacao HOM05D000955 ORTHO05D001429 3.7e-08 61.2 64 46.9
Cfa018537 Carpinus fangiana HOM05D000955 ORTHO05D001429 4.8e-08 60.8 66 43.9
CsaV3_4G034250 Cucumis sativus L. HOM05D000955 ORTHO05D001429 4.8e-08 60.8 63 38.1
Manes.05G172801 Manihot esculenta HOM05D000955 ORTHO05D001429 4.8e-08 60.8 67 44.8
Sed0021895 Sechium edule HOM05D000955 ORTHO05D001429 4.8e-08 60.8 66 39.4
MELO3C016745.2 Cucumis melo HOM05D000955 ORTHO05D001429 6.3e-08 60.5 63 39.7
Manes.05G173400 Manihot esculenta HOM05D000955 ORTHO05D001429 6.3e-08 60.5 64 45.3
Actinidia22622 Actinidia chinensis HOM05D000955 ORTHO05D001429 8.2e-08 60.1 67 47.8
CiPaw.15G058900 Carya illinoinensis HOM05D000955 ORTHO05D001429 8.2e-08 60.1 66 47.0
CiPaw.15G060100 Carya illinoinensis HOM05D000955 ORTHO05D001429 8.2e-08 60.1 67 46.3
Manes.04G102800 Manihot esculenta HOM05D000955 ORTHO05D001429 8.2e-08 60.1 64 42.2
Potri.002G126900 Populus trichocarpa HOM05D000955 ORTHO05D001429 1.1e-07 59.7 67 43.3
Sc26g0000770 Simmondsia chinensis HOM05D000955 ORTHO05D001429 1.1e-07 59.7 65 41.5
Sc26g0000780 Simmondsia chinensis HOM05D000955 ORTHO05D001429 1.1e-07 59.7 65 40.0
PGSC0003DMG400007984 Solanum tuberosum HOM05D000955 ORTHO05D001429 1.1e-07 59.7 66 45.5
Atru.chr13.684 Acer truncatum HOM05D000955 ORTHO05D001429 1.4e-07 59.3 64 46.9
AUR62014425 Chenopodium quinoa HOM05D000955 ORTHO05D001429 1.4e-07 59.3 64 40.6
AUR62019161 Chenopodium quinoa HOM05D000955 ORTHO05D001429 1.4e-07 59.3 64 40.6
AUR62034572 Chenopodium quinoa HOM05D000955 ORTHO05D001429 1.4e-07 59.3 64 40.6
Manes.05G173000 Manihot esculenta HOM05D000955 ORTHO05D001429 1.8e-07 58.9 67 43.3
PGR031G2327 Punica granatum HOM05D000955 ORTHO05D001429 1.8e-07 58.9 64 46.9
Atru.chr13.685 Acer truncatum HOM05D000955 ORTHO05D001429 2.4e-07 58.5 67 43.3
Manes.04G102900 Manihot esculenta HOM05D000955 ORTHO05D001429 2.4e-07 58.5 64 40.6
Manes.04G103100 Manihot esculenta HOM05D000955 ORTHO05D001429 2.4e-07 58.5 64 40.6
ClCG05G019800 Citrullus lanatus HOM05D000955 ORTHO05D001429 3.1e-07 58.2 63 36.5
Potri.008G079066 Populus trichocarpa HOM05D000955 ORTHO05D001429 3.1e-07 58.2 67 43.3
RcHm_v2.0_Chr6g0278331 Rosa chinensis HOM05D000955 ORTHO05D001429 4.1e-07 57.8 71 43.7
COL.COLO4_26488 Corchorus olitorius HOM05D000955 ORTHO05D001429 5.3e-07 57.4 64 45.3
Manes.04G103000 Manihot esculenta HOM05D000955 ORTHO05D001429 5.3e-07 57.4 64 39.1
RcHm_v2.0_Chr6g0278301 Rosa chinensis HOM05D000955 ORTHO05D001429 5.3e-07 57.4 71 43.7
Thecc.08G009900 Theobroma cacao HOM05D000955 ORTHO05D001429 5.3e-07 57.4 67 44.8
Ah.12g052380 Amaranthus hybridus HOM05D006501 ORTHO05D008241 6.9e-07 57.0 64 40.6
Gohir.A06G018300 Gossypium hirsutum HOM05D000955 ORTHO05D001429 6.9e-07 57.0 66 45.5
Manes.04G102700 Manihot esculenta HOM05D000955 ORTHO05D001429 6.9e-07 57.0 64 39.1
Manes.18G036100 Manihot esculenta HOM05D000955 ORTHO05D001429 6.9e-07 57.0 66 45.5
Cfa018536 Carpinus fangiana HOM05D000955 ORTHO05D001429 9.1e-07 56.6 66 43.9
CsaV3_2G027860 Cucumis sativus L. HOM05D000955 ORTHO05D001429 9.1e-07 56.6 68 36.8
CiPaw.16G044800 Carya illinoinensis HOM05D000955 ORTHO05D001429 1.2e-06 56.2 64 42.2
AUR62010820 Chenopodium quinoa HOM05D006501 ORTHO05D008241 1.2e-06 56.2 64 40.6
ClCG08G015880 Citrullus lanatus HOM05D000955 ORTHO05D001429 1.2e-06 56.2 67 34.3
CiPaw.16G045200 Carya illinoinensis HOM05D000955 ORTHO05D001429 1.5e-06 55.8 66 45.5
CiPaw.16G045300 Carya illinoinensis HOM05D000955 ORTHO05D001429 1.5e-06 55.8 66 45.5
MELO3C016747.2 Cucumis melo HOM05D000955 ORTHO05D001429 1.5e-06 55.8 63 39.7
Dinv29919 Davidia involucrata HOM05D000955 ORTHO05D001429 1.5e-06 55.8 67 38.8
AUR62019819 Chenopodium quinoa HOM05D006501 ORTHO05D008241 2.0e-06 55.5 64 39.1
EL10Ac5g12897 Beta vulgaris HOM05D006501 ORTHO05D008241 2.6e-06 55.1 64 39.1
MELO3C010866.2 Cucumis melo HOM05D000955 ORTHO05D001429 2.6e-06 55.1 69 36.2
CsaV3_4G034270 Cucumis sativus L. HOM05D000955 ORTHO05D001429 2.6e-06 55.1 63 39.7
Gohir.D02G091700 Gossypium hirsutum HOM05D000955 ORTHO05D001429 2.6e-06 55.1 66 47.0
Gohir.D06G016500 Gossypium hirsutum HOM05D000955 ORTHO05D001429 2.6e-06 55.1 66 45.5
Gorai.005G102800 Gossypium raimondii HOM05D000955 ORTHO05D001429 2.6e-06 55.1 66 47.0
Gorai.010G019400 Gossypium raimondii HOM05D000955 ORTHO05D001429 2.6e-06 55.1 66 45.5
Actinidia22623 Actinidia chinensis HOM05D000955 ORTHO05D001429 3.4e-06 54.7 64 45.3
CsaV3_2G027920 Cucumis sativus L. HOM05D000955 ORTHO05D001429 3.4e-06 54.7 73 34.2
QL02p005085 Quercus lobata HOM05D000955 ORTHO05D001429 3.4e-06 54.7 63 41.3
RcHm_v2.0_Chr6g0307631 Rosa chinensis HOM05D000955 ORTHO05D001429 3.4e-06 54.7 61 47.5
Thecc.08G008600 Theobroma cacao HOM05D000955 ORTHO05D001429 3.4e-06 54.7 66 43.9
Atru.chr13.682 Acer truncatum HOM05D000955 ORTHO05D001429 4.5e-06 54.3 66 40.9
Thecc.08G008700 Theobroma cacao HOM05D000955 ORTHO05D001429 4.5e-06 54.3 64 45.3
Atru.chr13.660 Acer truncatum HOM05D000955 ORTHO05D001429 5.9e-06 53.9 67 43.3
COL.COLO4_08734 Corchorus olitorius HOM05D000955 ORTHO05D001429 5.9e-06 53.9 64 43.8
Manes.05G173200 Manihot esculenta HOM05D000955 ORTHO05D001429 5.9e-06 53.9 63 46.0
Thecc.04G032600 Theobroma cacao HOM05D000955 ORTHO05D001429 5.9e-06 53.9 64 43.8
Atru.chr13.681 Acer truncatum HOM05D000955 ORTHO05D001429 7.7e-06 53.5 66 42.4
CiPaw.15G060200 Carya illinoinensis HOM05D000955 ORTHO05D001429 7.7e-06 53.5 61 47.5
Gohir.D06G016300 Gossypium hirsutum HOM05D000955 ORTHO05D001429 7.7e-06 53.5 66 42.4
Gorai.010G019200 Gossypium raimondii HOM05D000955 ORTHO05D001429 7.7e-06 53.5 66 42.4
Thecc.08G009000 Theobroma cacao HOM05D000955 ORTHO05D001429 7.7e-06 53.5 71 42.3


User provided reference genes

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