Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014205 Sechium edule HOM05D004029 ORTHO05D004613 2.4e-119 432.2 215 100.0
CsaV3_3G044490 Cucumis sativus L. HOM05D004029 ORTHO05D004613 3.6e-83 312.0 197 82.2
ClCG11G018320 Citrullus lanatus HOM05D004029 ORTHO05D004613 8.0e-83 310.8 197 82.2
MELO3C018224.2 Cucumis melo HOM05D004029 ORTHO05D004613 2.3e-82 309.3 197 81.7
TWI38G0763 Tripterygium wilfordii HOM05D004029 ORTHO05D004613 1.2e-70 270.4 201 69.7
Cfa020529 Carpinus fangiana HOM05D004029 ORTHO05D004613 2.9e-69 265.8 208 65.4
Prupe.4G187500 Prunus persica HOM05D004029 ORTHO05D004613 1.1e-68 263.8 198 68.2
Dinv08328 Davidia involucrata HOM05D004029 ORTHO05D004613 3.2e-68 262.3 182 73.1
Atru.chr2.2811 Acer truncatum HOM05D004029 ORTHO05D004613 4.2e-68 261.9 201 65.7
FAN21G1497 Fragaria x ananassa HOM05D004029 ORTHO05D004613 4.2e-68 261.9 197 67.5
GSVIVG01014409001 Vitis vinifera HOM05D004029 ORTHO05D004613 4.2e-68 261.9 182 71.4
Thecc.07G074600 Theobroma cacao HOM05D004029 ORTHO05D004613 1.6e-67 260.0 194 66.5
Haze_09504 Corylus avellana HOM05D004029 ORTHO05D004613 3.6e-67 258.8 208 64.4
CSS0001233 Camellia sinensis var. sinensis HOM05D004029 ORTHO05D004613 6.1e-67 258.1 181 70.7
QL08p019114 Quercus lobata HOM05D004029 ORTHO05D004613 6.1e-67 258.1 207 64.3
FvH4_3g20750 Fragaria vesca HOM05D004029 ORTHO05D004613 8.0e-67 257.7 197 66.0
FAN11G1114 Fragaria x ananassa HOM05D004029 ORTHO05D004613 8.0e-67 257.7 197 66.0
Duzib268G1628 Durio zibethinus HOM05D004029 ORTHO05D004613 1.0e-66 257.3 194 66.0
FAN25G1694 Fragaria x ananassa HOM05D004029 ORTHO05D004613 1.0e-66 257.3 208 63.9
Ah.06g183680 Amaranthus hybridus HOM05D004029 ORTHO05D004613 1.4e-66 256.9 193 65.8
FAN16G1973 Fragaria x ananassa HOM05D004029 ORTHO05D004613 1.4e-66 256.9 197 65.5
MD11G1239600 Malus domestica HOM05D004029 ORTHO05D004613 1.4e-66 256.9 197 67.0
CSS0038840 Camellia sinensis var. sinensis HOM05D004029 ORTHO05D004613 3.0e-66 255.8 181 70.2
COL.COLO4_03559 Corchorus olitorius HOM05D004029 ORTHO05D004613 3.0e-66 255.8 200 66.0
Potri.011G123900 Populus trichocarpa HOM05D004029 ORTHO05D004613 4.0e-66 255.4 199 65.8
RcHm_v2.0_Chr5g0034971 Rosa chinensis HOM05D004029 ORTHO05D004613 5.2e-66 255.0 197 67.5
Thhalv10012467m.g Eutrema salsugineum HOM05D004029 ORTHO05D004613 8.8e-66 254.2 194 64.4
PSO541G4143 Papaver somniferum HOM05D004029 ORTHO05D004613 8.8e-66 254.2 201 64.7
PSO675G2841 Papaver somniferum HOM05D004029 ORTHO05D004613 2.0e-65 253.1 201 64.2
Carub.0008s1474 Capsella rubella HOM05D004029 ORTHO05D004613 2.6e-65 252.7 189 66.7
MD03G1222200 Malus domestica HOM05D004029 ORTHO05D004613 3.4e-65 252.3 197 65.5
TAR627G0860 Trochodendron aralioides HOM05D004029 ORTHO05D004613 3.4e-65 252.3 202 63.9
vmacro11822 Vaccinium macrocarpon HOM05D004029 ORTHO05D004613 7.5e-65 251.1 201 64.7
EL10Ac4g08092 Beta vulgaris HOM05D004029 ORTHO05D004613 9.8e-65 250.8 200 64.0
Eucgr.F03341 Eucalyptus grandis HOM05D004029 ORTHO05D004613 9.8e-65 250.8 199 63.3
Gorai.002G074000 Gossypium raimondii HOM05D004029 ORTHO05D004613 9.8e-65 250.8 182 69.8
Duzib213G0443 Durio zibethinus HOM05D004029 ORTHO05D004613 1.3e-64 250.4 200 63.0
Gohir.D01G054200 Gossypium hirsutum HOM05D004029 ORTHO05D004613 1.3e-64 250.4 182 69.8
Aa31LG3G10350 Aethionema arabicum HOM05D004029 ORTHO05D004613 1.7e-64 250.0 182 68.1
CiPaw.11G174500 Carya illinoinensis HOM05D004029 ORTHO05D004613 2.8e-64 249.2 182 69.2
AUR62015624 Chenopodium quinoa HOM05D004029 ORTHO05D004613 2.8e-64 249.2 195 66.2
AUR62029337 Chenopodium quinoa HOM05D004029 ORTHO05D004613 2.8e-64 249.2 195 66.2
Lj1C850G7 Lonicera japonica HOM05D004029 ORTHO05D004613 2.8e-64 249.2 201 64.7
THA.LOC104811852 Tarenaya hassleriana HOM05D004029 ORTHO05D004613 3.7e-64 248.8 199 62.8
Manes.03G114700 Manihot esculenta HOM05D004029 ORTHO05D004613 4.9e-64 248.4 182 69.8
Rhsim06G0193700 Rhododendron simsii HOM05D004029 ORTHO05D004613 8.3e-64 247.7 182 68.7
AT5G54440 Arabidopsis thaliana HOM05D004029 ORTHO05D004613 1.1e-63 247.3 189 64.6
PGR031G0420 Punica granatum HOM05D004029 ORTHO05D004613 1.1e-63 247.3 201 62.7
Nn1g03970 Nelumbo nucifera HOM05D004029 ORTHO05D004613 1.8e-63 246.5 197 63.5
AL8G29790 Arabidopsis lyrata HOM05D004029 ORTHO05D004613 2.4e-63 246.1 189 64.0
Cpa.g.sc80.100 Carica papaya HOM05D004029 ORTHO05D004613 2.4e-63 246.1 179 67.0
Sabra11G0109200 Salix brachista HOM05D004029 ORTHO05D004613 3.1e-63 245.7 223 58.7
Oeu008022.1 Olea europaea HOM05D004029 ORTHO05D004613 7.0e-63 244.6 213 62.0
Aqoxy7G04099 Aquilegia oxysepala HOM05D004029 ORTHO05D004613 1.2e-62 243.8 201 61.7
arahy.Tifrunner.gnm1.ann1.IWX37I Arachis hypogaea HOM05D004029 ORTHO05D004613 1.6e-62 243.4 180 66.7
BcaB05g22133 Brassica carinata HOM05D004029 ORTHO05D004613 1.6e-62 243.4 198 62.1
CANSAT11G2434 Cannabis sativa HOM05D004029 ORTHO05D004613 1.6e-62 243.4 182 69.8
Ca_01815_v3 Cicer arietinum L. HOM05D004029 ORTHO05D004613 2.0e-62 243.0 197 62.4
Ca_30535_v3 Cicer arietinum L. HOM05D004029 ORTHO05D004613 2.0e-62 243.0 197 62.4
Thhalv10015732m.g Eutrema salsugineum HOM05D004029 ORTHO05D004613 3.5e-62 242.3 180 65.6
arahy.Tifrunner.gnm1.ann1.3J4V9H Arachis hypogaea HOM05D004029 ORTHO05D004613 5.9e-62 241.5 180 66.1
BolC2t07800H Brassica oleracea HOM05D004029 ORTHO05D004613 5.9e-62 241.5 199 62.3
Glyma.13G280700 Glycine max HOM05D004029 ORTHO05D004613 5.9e-62 241.5 197 61.4
A02p10290 Brassica napus HOM05D004029 ORTHO05D004613 1.0e-61 240.7 199 61.8
BraA02t06097Z Brassica rapa HOM05D004029 ORTHO05D004613 1.0e-61 240.7 199 61.8
CARHR267710 Cardamine hirsuta HOM05D004029 ORTHO05D004613 1.0e-61 240.7 189 63.5
C02p17030 Brassica napus HOM05D004029 ORTHO05D004613 1.3e-61 240.4 200 61.5
Sp6g16420 Schrenkiella parvula HOM05D004029 ORTHO05D004613 1.3e-61 240.4 198 61.6
BcaC03g14313 Brassica carinata HOM05D004029 ORTHO05D004613 1.7e-61 240.0 199 61.8
Ciclev10007273m.g Citrus clementina HOM05D004029 ORTHO05D004613 2.3e-61 239.6 182 64.8
Lj3g0020332 Lotus japonicus HOM05D004029 ORTHO05D004613 2.9e-61 239.2 192 62.0
Solyc07g063440.3 Solanum lycopersicum HOM05D004029 ORTHO05D004613 2.9e-61 239.2 195 61.5
Sopen07g031610 Solanum pennellii HOM05D004029 ORTHO05D004613 2.9e-61 239.2 195 61.5
Psat5g246120 Pisum sativum HOM05D004029 ORTHO05D004613 3.8e-61 238.8 197 61.4
Lalb_Chr25g0286611 Lupinus albus HOM05D004029 ORTHO05D004613 6.6e-61 238.0 213 56.8
Medtr2g080050 Medicago truncatula HOM05D004029 ORTHO05D004613 6.6e-61 238.0 197 60.4
Actinidia05171 Actinidia chinensis HOM05D004029 ORTHO05D004613 1.9e-60 236.5 201 61.7
Lalb_Chr01g0016971 Lupinus albus HOM05D004029 ORTHO05D004613 4.3e-60 235.3 197 59.9
ATR0064G128 Amborella trichopoda HOM05D004029 ORTHO05D004613 9.5e-60 234.2 201 59.2
Phvul.005G085200 Phaseolus vulgaris HOM05D004029 ORTHO05D004613 9.5e-60 234.2 197 60.4
A10p11660 Brassica napus HOM05D004029 ORTHO05D004613 1.6e-59 233.4 198 60.6
CAN.G162.91 Capsicum annuum HOM05D004029 ORTHO05D004613 1.6e-59 233.4 186 64.0
Migut.H01912 Erythranthe guttata HOM05D004029 ORTHO05D004613 1.6e-59 233.4 181 66.3
VMungo1080G0798 Vigna mungo HOM05D004029 ORTHO05D004613 1.6e-59 233.4 197 59.4
BcaC04g20340 Brassica carinata HOM05D004029 ORTHO05D004613 2.8e-59 232.6 198 60.1
BolC9t57346H Brassica oleracea HOM05D004029 ORTHO05D004613 2.8e-59 232.6 198 60.1
Sc03g0009690 Simmondsia chinensis HOM05D004029 ORTHO05D004613 4.7e-59 231.9 202 59.4
BraA10t43261Z Brassica rapa HOM05D004029 ORTHO05D004613 6.1e-59 231.5 200 59.5
MSTRG.12924 Avicennia marina HOM05D004029 ORTHO05D004613 1.8e-58 229.9 182 65.4
Gohir.A11G282734 Gossypium hirsutum HOM05D004029 ORTHO05D004613 1.8e-58 229.9 195 61.0
BcaB08g35795 Brassica carinata HOM05D004029 ORTHO05D004613 2.3e-58 229.6 198 59.1
SGA_v2.0_scaffold77G25216 Striga asiatica HOM05D004029 ORTHO05D004613 2.3e-58 229.6 182 63.2
C09p44730 Brassica napus HOM05D004029 ORTHO05D004613 3.0e-58 229.2 198 59.1
Peaxi162Scf01111g00112 Petunia axillaris HOM05D004029 ORTHO05D004613 4.0e-58 228.8 199 60.3
HanXRQChr10g0289491 Helianthus annuus HOM05D004029 ORTHO05D004613 6.8e-58 228.0 201 60.2
DCAR_013079 Daucus carota HOM05D004029 ORTHO05D004613 5.7e-57 224.9 197 57.9
CDE05G1182 Ceratophyllum demersum HOM05D004029 ORTHO05D004613 4.9e-56 221.9 201 57.7
Os12g0554400 Oryza sativa ssp. japonica HOM05D004029 ORTHO05D004613 6.4e-56 221.5 199 54.3
Gohir.D11G296200 Gossypium hirsutum HOM05D004029 ORTHO05D004613 8.3e-56 221.1 183 62.3
Lsat_1_v5_gn_7_105721 Lactuca sativa HOM05D004029 ORTHO05D004613 1.1e-55 220.7 182 62.1
Hund02202 Selenicereus undatus HOM05D004029 ORTHO05D004613 1.8e-55 219.9 181 64.1
SEGI_39917 Sequoiadendron giganteum HOM05D004029 ORTHO05D004613 7.3e-52 208.0 183 57.9
HanXRQChr13g0386411 Helianthus annuus HOM05D004029 ORTHO05D004613 1.0e-50 204.1 204 52.0
ECA240G1154 Erigeron canadensis HOM05D004029 ORTHO05D004613 7.5e-49 198.0 184 57.1
Actinidia39414 Actinidia chinensis HOM05D004029 ORTHO05D004613 1.4e-47 193.7 149 65.1
ECA236G3046 Erigeron canadensis HOM05D004029 ORTHO05D004613 2.0e-46 189.9 170 57.1
Lsat_1_v5_gn_3_80381 Lactuca sativa HOM05D004029 ORTHO05D004613 2.0e-41 173.3 172 55.2
Lsat_1_v5_gn_4_112941 Lactuca sativa HOM05D004029 ORTHO05D004613 2.0e-41 173.3 172 55.2
Lsat_1_v5_gn_7_74701 Lactuca sativa HOM05D004029 ORTHO05D004613 2.0e-41 173.3 172 55.2
Lsat_1_v5_gn_9_95861 Lactuca sativa HOM05D004029 ORTHO05D004613 2.0e-41 173.3 172 55.2
GSVIVG01015766001 Vitis vinifera HOM05D004029 ORTHO05D004613 1.9e-39 166.8 110 75.5
Gohir.A11G282591 Gossypium hirsutum HOM05D004029 ORTHO05D004613 7.1e-39 164.9 137 60.6
GSVIVG01016530001 Vitis vinifera HOM05D004029 ORTHO05D004613 7.1e-39 164.9 110 74.5
Mapoly0031s0138 Marchantia polymorpha HOM05D004029 ORTHO05D004613 1.0e-37 161.0 202 42.6
unitig_0.g2259 Utricularia gibba HOM05D004029 ORTHO05D004613 6.6e-37 158.3 210 45.7
GSVIVG01005601001 Vitis vinifera HOM05D004029 ORTHO05D004613 1.1e-36 157.5 110 71.8
GSVIVG01006099001 Vitis vinifera HOM05D004029 ORTHO05D004613 1.1e-36 157.5 110 71.8
GSVIVG01030797001 Vitis vinifera HOM05D004029 ORTHO05D004613 9.5e-36 154.5 110 71.8
Lsat_1_v5_gn_8_16361 Lactuca sativa HOM05D004029 ORTHO05D004613 4.7e-35 152.1 118 66.1
Sed0019496 Sechium edule HOM05D004029 ORTHO05D004613 3.1e-34 149.4 108 72.2
HPP92_020356 Vanilla planifolia HOM05D004029 ORTHO05D004613 1.3e-29 134.0 95 60.0
Pp3c26_12060 Physcomitrium patens HOM05D004029 ORTHO05D004613 2.3e-29 133.3 192 40.1
CBR_g48014 Chara braunii HOM05D004029 ORTHO05D004613 1.2e-22 110.9 234 29.5
Dinv22372 Davidia involucrata HOM05D004029 ORTHO05D004613 3.4e-09 66.2 60 56.7


User provided reference genes

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