Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014111 Sechium edule HOM05D003575 ORTHO05D003587 4.5e-258 894.0 435 100.0
ClCG02G002950 Citrullus lanatus HOM05D003575 ORTHO05D003587 2.7e-154 549.3 426 66.2
CsaV3_3G046180 Cucumis sativus L. HOM05D003575 ORTHO05D003587 4.9e-148 528.5 410 65.6
Sed0014379 Sechium edule HOM05D003575 ORTHO05D003587 6.2e-143 511.5 422 62.6
MELO3C030470.2 Cucumis melo HOM05D003575 ORTHO05D003587 3.0e-129 466.1 425 59.5
CiPaw.04G197600 Carya illinoinensis HOM05D003575 ORTHO05D003587 7.2e-83 312.0 389 43.4
Hma1.2p1_0599F.1_g187070 Hydrangea macrophylla HOM05D003575 ORTHO05D003587 4.4e-80 302.8 430 41.2
Actinidia07857 Actinidia chinensis HOM05D003575 ORTHO05D003587 1.6e-77 294.3 401 40.4
CSS0035464 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 3.6e-74 283.1 387 40.8
TAR626G1391 Trochodendron aralioides HOM05D003575 ORTHO05D003587 8.9e-73 278.5 441 37.4
CSS0012601 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 4.4e-72 276.2 400 39.8
Haze_12614 Corylus avellana HOM05D003366 ORTHO05D004045 2.0e-69 267.3 394 40.9
Thecc.01G197600 Theobroma cacao HOM05D003575 ORTHO05D003587 5.9e-69 265.8 414 39.4
Rhsim06G0177900 Rhododendron simsii HOM05D003575 ORTHO05D003587 1.0e-68 265.0 408 37.5
CANSAT64G0731 Cannabis sativa HOM05D003575 ORTHO05D003587 3.9e-68 263.1 405 37.5
Gohir.D07G092200 Gossypium hirsutum HOM05D003575 ORTHO05D003587 3.9e-68 263.1 391 39.1
TWI18G0759 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 8.6e-68 261.9 406 37.9
Gorai.001G098800 Gossypium raimondii HOM05D003575 ORTHO05D003587 1.1e-67 261.5 391 39.1
Potri.002G216900 Populus trichocarpa HOM05D003575 ORTHO05D003587 1.9e-67 260.8 407 37.8
Lj6g0014157 Lotus japonicus HOM05D003575 ORTHO05D003587 5.6e-67 259.2 403 36.5
QL04p067739 Quercus lobata HOM05D003575 ORTHO05D003587 5.6e-67 259.2 410 38.0
Ciclev10015675m.g Citrus clementina HOM05D003575 ORTHO05D003587 1.2e-66 258.1 393 39.2
Haze_12603 Corylus avellana HOM05D003366 ORTHO05D004045 2.1e-66 257.3 395 40.5
arahy.Tifrunner.gnm1.ann1.04VE6P Arachis hypogaea HOM05D003575 ORTHO05D003587 1.4e-65 254.6 393 39.4
DCAR_019672 Daucus carota HOM05D003575 ORTHO05D003587 1.8e-65 254.2 387 37.2
Duzib133G0340 Durio zibethinus HOM05D003575 ORTHO05D003587 6.8e-65 252.3 392 38.3
RcHm_v2.0_Chr7g0213061 Rosa chinensis HOM05D003575 ORTHO05D003587 6.8e-65 252.3 386 36.8
vmacro12070 Vaccinium macrocarpon HOM05D003575 ORTHO05D003587 1.2e-64 251.5 438 35.2
VMungo0647G0230 Vigna mungo HOM05D003575 ORTHO05D003587 1.5e-64 251.1 389 38.6
arahy.Tifrunner.gnm1.ann1.F2CSMS Arachis hypogaea HOM05D003575 ORTHO05D003587 2.6e-64 250.4 445 37.3
arahy.Tifrunner.gnm1.ann1.RMR7W1 Arachis hypogaea HOM05D003575 ORTHO05D003587 2.6e-64 250.4 445 37.3
CANSAT21G1971 Cannabis sativa HOM05D003575 ORTHO05D003587 2.6e-64 250.4 406 36.2
FAN18G1810 Fragaria x ananassa HOM05D003575 ORTHO05D003587 9.8e-64 248.4 397 36.5
FAN18G2204 Fragaria x ananassa HOM05D003575 ORTHO05D003587 3.7e-63 246.5 398 35.9
Phvul.011G189400 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 6.4e-63 245.7 397 38.8
Glyma.13G186300 Glycine max HOM05D003575 ORTHO05D003587 1.4e-62 244.6 381 36.7
Manes.12G063604 Manihot esculenta HOM05D003575 ORTHO05D003587 9.2e-62 241.9 349 35.2
MD17G1118100 Malus domestica HOM05D003575 ORTHO05D003587 1.2e-61 241.5 407 36.1
Gorai.007G165400 Gossypium raimondii HOM05D003575 ORTHO05D003587 2.7e-61 240.4 385 37.1
CDE04G2197 Ceratophyllum demersum HOM05D003575 ORTHO05D003587 1.3e-60 238.0 409 35.2
Prupe.3G196500 Prunus persica HOM05D003575 ORTHO05D003587 1.3e-60 238.0 397 34.5
Gohir.A11G148300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 8.6e-60 235.3 385 37.4
Nn1g03152 Nelumbo nucifera HOM05D003575 ORTHO05D003587 1.1e-59 235.0 413 35.4
Ca_16343_v3 Cicer arietinum L. HOM05D003575 ORTHO05D003587 1.5e-59 234.6 379 36.9
Sopen12g002030 Solanum pennellii HOM05D003575 ORTHO05D003587 5.6e-59 232.6 392 33.2
Psat5g104640 Pisum sativum HOM05D003575 ORTHO05D003587 7.3e-59 232.3 379 38.0
PGSC0003DMG401004292 Solanum tuberosum HOM05D003575 ORTHO05D003587 1.6e-58 231.1 392 32.7
Peaxi162Scf00047g02035 Petunia axillaris HOM05D003575 ORTHO05D003587 3.6e-58 229.9 378 35.4
Solyc12g006060.2 Solanum lycopersicum HOM05D003575 ORTHO05D003587 3.6e-58 229.9 392 33.2
Sabra02G0168700 Salix brachista HOM05D003575 ORTHO05D003587 4.7e-58 229.6 395 34.7
Oeu029955.1 Olea europaea HOM05D003575 ORTHO05D003587 8.1e-58 228.8 398 35.4
TPR.G22472 Trifolium pratense HOM05D003575 ORTHO05D003587 1.1e-57 228.4 385 36.6
Medtr6g042090 Medicago truncatula HOM05D003575 ORTHO05D003587 1.4e-57 228.0 387 35.9
COL.COLO4_19638 Corchorus olitorius HOM05D003575 ORTHO05D003587 1.8e-57 227.6 413 34.1
MSTRG.426 Avicennia marina HOM05D003575 ORTHO05D003587 2.3e-57 227.3 415 33.7
Lalb_Chr14g0362581 Lupinus albus HOM05D003575 ORTHO05D003587 1.5e-56 224.6 316 39.2
SHI10168 Sapria himalayana HOM05D003575 ORTHO05D003587 4.4e-56 223.0 435 33.3
Migut.L00790 Erythranthe guttata HOM05D003575 ORTHO05D003587 3.7e-55 219.9 402 33.1
Phvul.007G122046 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 4.9e-55 219.5 558 29.7
Aqoxy5G03849 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 1.4e-54 218.0 390 35.1
HanXRQChr04g0126411 Helianthus annuus HOM05D003575 ORTHO05D003587 1.4e-54 218.0 380 35.5
Medtr6g042040 Medicago truncatula HOM05D003575 ORTHO05D003587 1.4e-54 218.0 395 35.7
RcHm_v2.0_Chr5g0034301 Rosa chinensis HOM05D003575 ORTHO05D003587 3.2e-54 216.9 402 33.8
Lsat_1_v5_gn_7_97960 Lactuca sativa HOM05D003575 ORTHO05D003587 5.4e-54 216.1 386 35.8
SGA_v2.0_scaffold407G51066 Striga asiatica HOM05D003575 ORTHO05D003587 2.7e-53 213.8 435 31.3
ECA236G0897 Erigeron canadensis HOM05D003575 ORTHO05D003587 1.3e-52 211.5 396 33.3
FAN21G0497 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.7e-52 211.1 392 33.2
HanXRQChr04g0126401 Helianthus annuus HOM05D003575 ORTHO05D003587 2.3e-52 210.7 390 33.3
Glyma.13G007400 Glycine max HOM05D003575 ORTHO05D003587 5.1e-52 209.5 389 34.2
FvH4_6g40510 Fragaria vesca HOM05D003575 ORTHO05D003587 1.9e-51 207.6 363 32.8
Medtr3g082720 Medicago truncatula HOM05D003575 ORTHO05D003587 1.9e-51 207.6 428 32.7
FvH4_3g20410 Fragaria vesca HOM05D003575 ORTHO05D003587 9.5e-51 205.3 392 32.4
FAN11G3075 Fragaria x ananassa HOM05D003575 ORTHO05D003587 9.5e-51 205.3 392 32.4
Solyc07g045320.3 Solanum lycopersicum HOM05D003575 ORTHO05D003587 2.8e-50 203.8 394 31.2
Sopen07g023850 Solanum pennellii HOM05D003575 ORTHO05D003587 1.1e-49 201.8 394 30.7
FAN21G1295 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.4e-49 201.4 398 31.4
AUR62029125 Chenopodium quinoa HOM05D003575 ORTHO05D003587 3.1e-49 200.3 430 30.5
Gohir.D11G155100 Gossypium hirsutum HOM05D003575 ORTHO05D003587 3.1e-49 200.3 314 37.9
Aqoxy5G03850 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 4.0e-49 199.9 396 30.8
CAN.G437.6 Capsicum annuum HOM05D003575 ORTHO05D003587 1.2e-48 198.4 373 33.2
TWI36G1168 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 1.5e-48 198.0 388 32.7
Nitab4.5_0009864g0030 Nicotiana tabacum HOM05D003575 ORTHO05D003587 1.7e-47 194.5 316 34.8
Peaxi162Scf00802g00028 Petunia axillaris HOM05D003575 ORTHO05D003587 1.7e-47 194.5 376 31.9
PSO675G6399 Papaver somniferum HOM05D003575 ORTHO05D003587 4.9e-47 193.0 395 31.9
Ah.01g002520 Amaranthus hybridus HOM05D004224 ORTHO05D006437 1.9e-46 191.0 395 31.9
Nitab4.5_0004644g0050 Nicotiana tabacum HOM05D003575 ORTHO05D003587 5.4e-46 189.5 318 34.3
FAN11G2840 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.6e-45 188.0 420 29.3
Nitab4.5_0000622g0080 Nicotiana tabacum HOM05D003575 ORTHO05D003587 1.6e-45 188.0 472 29.2
FAN14G2021 Fragaria x ananassa HOM05D003575 ORTHO05D003587 3.5e-45 186.8 344 33.1
Lsat_1_v5_gn_7_97980 Lactuca sativa HOM05D000074 ORTHO05D001293 3.5e-45 186.8 310 36.5
PSO541G2609 Papaver somniferum HOM05D003575 ORTHO05D003587 4.6e-45 186.4 386 31.3
SalBow1G3222 Salvia bowleyana HOM05D003575 ORTHO05D003587 6.0e-45 186.0 382 30.9
HanXRQChr16g0520571 Helianthus annuus HOM05D003575 ORTHO05D003587 7.8e-45 185.7 390 32.8
AUR62014996 Chenopodium quinoa HOM05D003575 ORTHO05D003587 1.3e-44 184.9 432 27.8
AUR62035876 Chenopodium quinoa HOM05D003575 ORTHO05D003587 1.3e-44 184.9 423 28.8
FAN16G3603 Fragaria x ananassa HOM05D003575 ORTHO05D003587 6.6e-44 182.6 455 28.1
ATR0751G270 Amborella trichopoda HOM05D003575 ORTHO05D003587 1.9e-43 181.0 411 31.1
EL10Ac9g22664 Beta vulgaris HOM05D003575 ORTHO05D003587 4.3e-43 179.9 424 30.0
FvH4_6g40530 Fragaria vesca HOM05D003575 ORTHO05D003587 8.9e-41 172.2 425 31.1
PGSC0003DMG400017406 Solanum tuberosum HOM05D003575 ORTHO05D003587 9.9e-40 168.7 304 30.9
FvH4_3g17720 Fragaria vesca HOM05D003575 ORTHO05D003587 2.2e-39 167.5 342 29.5
FAN25G1379 Fragaria x ananassa HOM05D003575 ORTHO05D003587 4.9e-39 166.4 391 28.9
FvH4_5g23730 Fragaria vesca HOM05D003575 ORTHO05D003587 5.4e-38 162.9 389 30.8
MBI15_g44598_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 2.3e-36 157.5 340 31.2
Dinv21311 Davidia involucrata HOM05D003575 ORTHO05D003587 1.5e-35 154.8 237 38.4
Medtr3g082740 Medicago truncatula HOM05D003575 ORTHO05D003587 3.3e-35 153.7 287 34.5
ECA236G1196 Erigeron canadensis HOM05D003366 ORTHO05D004045 2.4e-33 147.5 397 29.5
VMungo1127G1165 Vigna mungo HOM05D003575 ORTHO05D003587 4.4e-32 143.3 173 43.9
RcHm_v2.0_Chr2g0133241 Rosa chinensis HOM05D003575 ORTHO05D003587 6.4e-31 139.4 169 42.0
Prupe.3G196400 Prunus persica HOM05D003575 ORTHO05D003587 1.9e-30 137.9 169 42.0
Manes.12G092200 Manihot esculenta HOM05D003575 ORTHO05D003587 2.1e-29 134.4 203 36.0
RcHm_v2.0_Chr2g0133311 Rosa chinensis HOM05D003575 ORTHO05D003587 1.7e-28 131.3 169 40.8
Dinv26593 Davidia involucrata HOM05D003575 ORTHO05D003587 1.9e-27 127.9 170 41.8
Gohir.A07G087300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 3.3e-27 127.1 308 30.2
MD09G1128800 Malus domestica HOM05D003575 ORTHO05D003587 1.3e-26 125.2 154 40.3
PSO170G1005 Papaver somniferum HOM05D003575 ORTHO05D003587 2.8e-26 124.0 167 38.3
Hund01540 Selenicereus undatus HOM05D003575 ORTHO05D003587 3.6e-26 123.6 376 26.9
THA.LOC104812766 Tarenaya hassleriana HOM05D003575 ORTHO05D003587 8.1e-26 122.5 156 42.3
AT4G25330 Arabidopsis thaliana HOM05D003575 ORTHO05D003587 6.9e-25 119.4 175 37.7
AL7G27800 Arabidopsis lyrata HOM05D003575 ORTHO05D003587 2.0e-24 117.9 174 36.8
FvH4_2g12920 Fragaria vesca HOM05D003575 ORTHO05D003587 9.9e-24 115.5 163 38.7
FAN24G1566 Fragaria x ananassa HOM05D003575 ORTHO05D003587 9.9e-24 115.5 163 38.7
FAN15G3143 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.2e-23 114.4 157 38.9
FAN20G0397 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.2e-23 114.4 157 38.9
PSO832G1827 Papaver somniferum HOM05D003575 ORTHO05D003587 2.9e-23 114.0 159 35.2
RcHm_v2.0_Chr2g0155791 Rosa chinensis HOM05D003575 ORTHO05D003587 2.9e-23 114.0 157 37.6
Carub.0007s1568 Capsella rubella HOM05D003575 ORTHO05D003587 4.9e-23 113.2 171 36.3
PSO591G0010 Papaver somniferum HOM05D003575 ORTHO05D003587 6.4e-23 112.8 159 34.6
RcHm_v2.0_Chr2g0155771 Rosa chinensis HOM05D003575 ORTHO05D003587 1.1e-22 112.1 154 39.0
PSO013G0348 Papaver somniferum HOM05D003575 ORTHO05D003587 2.4e-22 110.9 180 33.9
PSO013G0383 Papaver somniferum HOM05D003575 ORTHO05D003587 2.4e-22 110.9 180 33.9
Aqoxy1G03433 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 3.2e-22 110.5 116 46.6
BraA03t14662Z Brassica rapa HOM05D003575 ORTHO05D003587 7.1e-22 109.4 155 38.1
RcHm_v2.0_Chr2g0155781 Rosa chinensis HOM05D003575 ORTHO05D003587 7.1e-22 109.4 180 36.7
TPR.G40538 Trifolium pratense HOM05D003575 ORTHO05D003587 7.1e-22 109.4 154 38.3
Thhalv10027138m.g Eutrema salsugineum HOM05D003575 ORTHO05D003587 9.3e-22 109.0 163 36.8
A03p55910 Brassica napus HOM05D003575 ORTHO05D003587 2.1e-21 107.8 155 37.4
TAR624G0842 Trochodendron aralioides HOM05D003575 ORTHO05D003587 2.7e-21 107.5 135 40.7
BolC7t45906H Brassica oleracea HOM05D003575 ORTHO05D003587 6.0e-21 106.3 155 36.8
PSO339G1364 Papaver somniferum HOM05D003575 ORTHO05D003587 6.0e-21 106.3 167 34.1
PSO339G4641 Papaver somniferum HOM05D003575 ORTHO05D003587 6.0e-21 106.3 167 34.1
PSO832G3669 Papaver somniferum HOM05D003575 ORTHO05D003587 6.0e-21 106.3 180 33.3
C07p54200 Brassica napus HOM05D003575 ORTHO05D003587 1.0e-20 105.5 155 36.8
PGSC0003DMG400017442 Solanum tuberosum HOM05D003575 ORTHO05D003587 1.0e-20 105.5 178 32.6
Aqoxy4G01549 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 1.8e-20 104.8 184 35.9
PSO013G0020 Papaver somniferum HOM05D003575 ORTHO05D003587 1.8e-20 104.8 162 34.0
PSO832G1021 Papaver somniferum HOM05D003575 ORTHO05D003587 1.8e-20 104.8 160 34.4
FAN14G1012 Fragaria x ananassa HOM05D003575 ORTHO05D003587 3.0e-20 104.0 169 37.3
Cc00_g01040 Coffea canephora HOM05D003575 ORTHO05D003587 5.1e-20 103.2 174 32.8
BcaC06g32820 Brassica carinata HOM05D003575 ORTHO05D003587 6.7e-20 102.8 135 40.0
PSO013G0119 Papaver somniferum HOM05D003575 ORTHO05D003587 8.7e-20 102.4 160 34.4
Medtr3g082725 Medicago truncatula HOM05D003575 ORTHO05D003587 2.5e-19 100.9 103 51.5
Sp7g23350 Schrenkiella parvula HOM05D003575 ORTHO05D003587 9.6e-19 99.0 163 33.7
Zm00001eb287050 Zea mays HOM05D003575 ORTHO05D003587 9.6e-19 99.0 155 32.3
PSO013G0266 Papaver somniferum HOM05D003575 ORTHO05D003587 2.1e-18 97.8 167 34.7
FAN16G0569 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.1e-17 95.5 331 24.8
MBI15_g06462_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 6.9e-17 92.8 284 27.8
Oeu041110.1 Olea europaea HOM05D003575 ORTHO05D003587 2.6e-16 90.9 139 42.4
MD09G1129100 Malus domestica HOM05D003575 ORTHO05D003587 1.0e-15 89.0 92 47.8
PSO017G4852 Papaver somniferum HOM05D003575 ORTHO05D003587 8.4e-15 85.9 165 31.5
Zm00001eb264990 Zea mays HOM05D003575 ORTHO05D003587 3.2e-14 84.0 159 29.6
FvH4_6g40520 Fragaria vesca HOM05D003575 ORTHO05D003587 9.3e-14 82.4 82 43.9
Aqoxy91s001 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 3.5e-13 80.5 120 39.2
SEGI_27817 Sequoiadendron giganteum HOM05D003575 ORTHO05D003587 2.3e-12 77.8 98 44.9
FvH4_3g20450 Fragaria vesca HOM05D039614 ORTHO05D045963 1.5e-11 75.1 83 38.6
FAN11G0216 Fragaria x ananassa HOM05D003575 ORTHO05D045963 1.5e-11 75.1 83 38.6
FAN14G3058 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.9e-11 74.7 88 38.6
MBI15_g48140_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 3.3e-11 73.9 91 40.7
Hund01541 Selenicereus undatus HOM05D009102 ORTHO05D003587 7.4e-11 72.8 97 38.1
Os05g0386400 Oryza sativa ssp. japonica HOM05D003575 ORTHO05D003587 1.3e-10 72.0 173 27.2
PSO339G5808 Papaver somniferum HOM05D003575 ORTHO05D003587 2.8e-10 70.9 141 30.5
Cc00_g01030 Coffea canephora HOM05D003575 ORTHO05D003587 8.2e-10 69.3 92 40.2
Dinv26594 Davidia involucrata HOM05D000074 ORTHO05D001293 1.8e-09 68.2 81 48.1
PSO339G3010 Papaver somniferum HOM05D003575 ORTHO05D003587 2.4e-09 67.8 95 34.7
Glyma.15G224002 Glycine max HOM05D003575 ORTHO05D003587 4.5e-08 63.5 73 38.4
Mapoly0066s0003 Marchantia polymorpha HOM05D040683 ORTHO05D003587 7.6e-08 62.8 143 30.1
Mapoly0072s0063 Marchantia polymorpha HOM05D040683 ORTHO05D003587 1.0e-07 62.4 131 29.8
CAN.G437.9 Capsicum annuum HOM05D003575 ORTHO05D003587 2.2e-07 61.2 80 35.0
RcHm_v2.0_Chr2g0155531 Rosa chinensis HOM05D003575 ORTHO05D003587 3.8e-07 60.5 57 47.4
EL10Ac6g15056 Beta vulgaris HOM05D003575 ORTHO05D003587 6.5e-07 59.7 88 38.6
EL10Ac9g22882 Beta vulgaris HOM05D003575 ORTHO05D003587 2.5e-06 57.8 88 37.5
Atru.chr6.3410 Acer truncatum HOM05D000074 ORTHO05D008782 7.2e-06 56.2 63 46.0


User provided reference genes

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