Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 9.6e-69 263.5 142 100.0
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 2.0e-45 186.0 167 69.5
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 9.1e-43 177.2 167 66.5
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 2.0e-42 176.0 167 66.5
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 1.1e-37 160.2 188 58.0
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 6.3e-36 154.5 165 58.2
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 2.6e-34 149.1 167 56.3
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 3.5e-34 148.7 167 56.3
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 7.7e-34 147.5 167 55.1
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 7.7e-34 147.5 167 56.3
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 2.2e-33 146.0 167 55.7
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 3.8e-33 145.2 167 56.3
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 5.0e-33 144.8 167 55.7
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 6.5e-33 144.4 167 53.9
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 8.5e-33 144.1 167 56.9
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 8.5e-33 144.1 168 55.4
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 8.5e-33 144.1 168 55.4
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 1.9e-32 142.9 167 55.1
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 1.9e-32 142.9 168 55.4
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 5.5e-32 141.4 167 53.3
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 9.4e-32 140.6 167 54.5
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 1.6e-31 139.8 167 53.9
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 2.1e-31 139.4 167 53.3
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 3.6e-31 138.7 167 52.1
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 4.7e-31 138.3 167 53.9
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 4.7e-31 138.3 167 54.5
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 1.0e-30 137.1 167 53.3
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 1.4e-30 136.7 167 53.9
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 4.0e-30 135.2 167 52.7
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 8.8e-30 134.0 167 52.1
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 4.4e-29 131.7 167 52.7
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 4.4e-29 131.7 167 55.1
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 4.4e-29 131.7 170 51.8
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 7.5e-29 131.0 167 52.7
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 7.5e-29 131.0 167 51.5
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 1.7e-28 129.8 167 50.3
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 2.2e-28 129.4 168 51.8
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 2.2e-28 129.4 167 50.9
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 2.2e-28 129.4 167 51.5
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 4.8e-28 128.3 166 51.2
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 4.8e-28 128.3 168 53.0
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 4.8e-28 128.3 167 52.1
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 4.8e-28 128.3 167 52.1
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 6.3e-28 127.9 167 51.5
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 8.2e-28 127.5 167 51.5
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 1.1e-27 127.1 167 52.1
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 1.1e-27 127.1 167 51.5
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 1.1e-27 127.1 165 50.9
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 1.1e-27 127.1 167 52.1
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 1.1e-27 127.1 167 51.5
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 1.4e-27 126.7 168 53.0
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 1.4e-27 126.7 167 55.1
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 1.8e-27 126.3 167 50.9
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 2.4e-27 125.9 164 51.2
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 3.1e-27 125.6 167 54.5
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 4.1e-27 125.2 165 50.3
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 5.3e-27 124.8 168 52.4
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 7.0e-27 124.4 168 50.6
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 9.1e-27 124.0 168 50.6
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 1.2e-26 123.6 169 49.7
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 1.2e-26 123.6 167 52.7
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 1.2e-26 123.6 169 55.0
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 1.2e-26 123.6 171 52.6
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 4.5e-26 121.7 162 54.3
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 1.0e-25 120.6 168 46.4
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 1.3e-25 120.2 178 48.9
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 2.2e-25 119.4 168 47.0
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 6.5e-25 117.9 159 49.1
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 8.5e-25 117.5 171 50.9
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 2.5e-24 115.9 166 48.2
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 2.5e-24 115.9 166 48.2
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 5.5e-24 114.8 179 46.9
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 5.5e-24 114.8 172 48.8
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 7.2e-24 114.4 179 48.0
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 9.4e-24 114.0 168 48.8
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 3.6e-23 112.1 167 47.3
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 4.7e-23 111.7 169 46.2
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 6.1e-23 111.3 167 47.9
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 8.0e-23 110.9 167 47.3
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 1.0e-22 110.5 167 48.5
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 5.2e-22 108.2 167 47.9
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 6.8e-22 107.8 168 47.0
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 6.8e-22 107.8 169 45.0
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 2.0e-21 106.3 175 44.6
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 2.0e-21 106.3 167 48.5
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 2.6e-21 105.9 190 43.2
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 3.4e-21 105.5 95 65.3
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 5.7e-21 104.8 167 46.1
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 5.7e-21 104.8 166 48.2
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 7.5e-21 104.4 170 46.5
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 9.8e-21 104.0 129 51.2
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 1.7e-20 103.2 170 46.5
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 1.7e-20 103.2 167 46.1
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 1.1e-19 100.5 149 49.7
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 2.4e-19 99.4 95 61.1
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 1.6e-18 96.7 166 41.6
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 4.5e-18 95.1 95 60.0
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 4.5e-18 95.1 95 60.0
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 5.9e-18 94.7 95 58.9
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 1.0e-17 94.0 170 41.8
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 1.3e-17 93.6 95 58.9
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 2.9e-17 92.4 149 44.3
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 8.6e-17 90.9 158 45.6
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 1.5e-16 90.1 121 50.4
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 9.5e-16 87.4 130 46.2
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 3.0e-14 82.4 163 39.3
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 5.2e-14 81.6 130 42.3
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 2.0e-13 79.7 152 36.8
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 2.6e-13 79.3 129 45.7
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 9.8e-13 77.4 258 32.2
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 1.3e-12 77.0 196 33.7
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 3.5e-10 68.9 165 37.0
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 5.0e-09 65.1 120 43.3
BcaB07g33434 Brassica carinata HOM05D000586 ORTHO05D008681 5.0e-09 65.1 69 56.5
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 1.2e-07 60.5 98 40.8
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 6.1e-07 58.2 94 41.5
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 1.0e-06 57.4 135 32.6
MD10G1061600 Malus domestica HOM05D000586 ORTHO05D008681 5.2e-06 55.1 50 58.0


User provided reference genes

Program Settings