Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014008 Sechium edule HOM05D006500 ORTHO05D008028 5.7e-92 340.9 170 100.0
Sed0015541 Sechium edule HOM05D006500 ORTHO05D008028 9.1e-82 307.0 170 89.4
MELO3C022425.2 Cucumis melo HOM05D006500 ORTHO05D008028 3.8e-80 301.6 172 86.0
ClCG06G001100 Citrullus lanatus HOM05D006500 ORTHO05D008028 7.2e-79 297.4 172 85.5
CsaV3_6G007030 Cucumis sativus L. HOM05D006500 ORTHO05D008028 4.0e-77 291.6 172 83.1
Potri.019G112100 Populus trichocarpa HOM05D006500 ORTHO05D008028 5.2e-69 264.6 155 80.6
Sabra19G0108100 Salix brachista HOM05D006500 ORTHO05D008028 7.5e-68 260.8 155 79.4
Prupe.1G207200 Prunus persica HOM05D006500 ORTHO05D008028 1.4e-66 256.5 153 79.7
Gohir.A05G327700 Gossypium hirsutum HOM05D006500 ORTHO05D008028 2.4e-66 255.8 137 85.4
CiPaw.02G100400 Carya illinoinensis HOM05D006500 ORTHO05D008028 5.4e-66 254.6 148 78.4
VMungo0251G2572 Vigna mungo HOM05D006500 ORTHO05D008028 5.4e-66 254.6 150 78.7
Duzib268G0518 Durio zibethinus HOM05D006500 ORTHO05D008028 9.1e-66 253.8 137 84.7
QL10p055774 Quercus lobata HOM05D006500 ORTHO05D008028 9.1e-66 253.8 149 79.2
GSVIVG01038143001 Vitis vinifera HOM05D006500 ORTHO05D008028 9.1e-66 253.8 147 81.0
Gohir.D05G327900 Gossypium hirsutum HOM05D006500 ORTHO05D008028 1.2e-65 253.4 137 84.7
Gorai.009G351800 Gossypium raimondii HOM05D006500 ORTHO05D008028 1.2e-65 253.4 137 84.7
Manes.11G129200 Manihot esculenta HOM05D006500 ORTHO05D008028 1.2e-65 253.4 142 81.7
Thecc.04G165600 Theobroma cacao HOM05D006500 ORTHO05D008028 1.6e-65 253.1 136 83.8
COL.COLO4_08138 Corchorus olitorius HOM05D006500 ORTHO05D008028 2.0e-65 252.7 144 82.6
TWI38G1400 Tripterygium wilfordii HOM05D006500 ORTHO05D008028 3.5e-65 251.9 139 82.0
Cpa.g.sc9.364 Carica papaya HOM05D006500 ORTHO05D008028 4.5e-65 251.5 136 85.3
CiPaw.01G170700 Carya illinoinensis HOM05D006500 ORTHO05D008028 4.5e-65 251.5 147 78.9
Carub.0001s0507 Capsella rubella HOM05D006500 ORTHO05D008028 5.9e-65 251.1 157 73.9
Psat7g120240 Pisum sativum HOM05D006500 ORTHO05D008028 5.9e-65 251.1 148 78.4
Potri.013G126900 Populus trichocarpa HOM05D006500 ORTHO05D008028 5.9e-65 251.1 142 80.3
Duzib151G0460 Durio zibethinus HOM05D006500 ORTHO05D008028 7.7e-65 250.8 135 85.2
Eucgr.A00110 Eucalyptus grandis HOM05D006500 ORTHO05D008028 7.7e-65 250.8 144 80.6
Eucgr.A00287 Eucalyptus grandis HOM05D006500 ORTHO05D008028 7.7e-65 250.8 144 80.6
Phvul.003G296700 Phaseolus vulgaris HOM05D006500 ORTHO05D008028 1.3e-64 250.0 148 79.1
MD17G1177800 Malus domestica HOM05D006500 ORTHO05D008028 1.7e-64 249.6 157 75.8
SGA_v2.0_scaffold283G46959 Striga asiatica HOM05D006500 ORTHO05D008028 1.7e-64 249.6 139 81.3
MSTRG.4301 Avicennia marina HOM05D006500 ORTHO05D008028 2.9e-64 248.8 139 82.0
MD04G1049100 Malus domestica HOM05D006500 ORTHO05D008028 2.9e-64 248.8 167 74.3
CSS0014789 Camellia sinensis var. sinensis HOM05D006500 ORTHO05D008028 3.8e-64 248.4 150 75.3
Medtr4g087310 Medicago truncatula HOM05D006500 ORTHO05D008028 3.8e-64 248.4 156 75.0
AT1G05720 Arabidopsis thaliana HOM05D006500 ORTHO05D008028 5.0e-64 248.1 161 70.8
Lj4g0023361 Lotus japonicus HOM05D006500 ORTHO05D008028 5.0e-64 248.1 161 73.9
Dinv33205 Davidia involucrata HOM05D006500 ORTHO05D008028 6.5e-64 247.7 147 76.9
Glyma.07G207800 Glycine max HOM05D006500 ORTHO05D008028 1.5e-63 246.5 150 76.0
Rhsim09G0010200 Rhododendron simsii HOM05D006500 ORTHO05D008028 1.5e-63 246.5 147 76.9
Sp1g04540 Schrenkiella parvula HOM05D006500 ORTHO05D008028 1.5e-63 246.5 137 79.6
AL1G15630 Arabidopsis lyrata HOM05D006500 ORTHO05D008028 2.5e-63 245.7 154 74.0
TAR365G1104 Trochodendron aralioides HOM05D006500 ORTHO05D008028 2.5e-63 245.7 152 74.3
BcaC07g42115 Brassica carinata HOM05D006500 ORTHO05D008028 3.2e-63 245.4 157 72.6
BcaC07g42118 Brassica carinata HOM05D006500 ORTHO05D008028 3.2e-63 245.4 157 72.6
BcaC07g42119 Brassica carinata HOM05D006500 ORTHO05D008028 3.2e-63 245.4 137 78.1
C08p51630 Brassica napus HOM05D006500 ORTHO05D008028 3.2e-63 245.4 157 72.6
BolC8t52691H Brassica oleracea HOM05D006500 ORTHO05D008028 3.2e-63 245.4 157 72.6
CANSAT56G1821 Cannabis sativa HOM05D006500 ORTHO05D008028 4.2e-63 245.0 137 82.5
Ciclev10022516m.g Citrus clementina HOM05D006500 ORTHO05D008028 4.2e-63 245.0 164 72.6
SalBow3G2241 Salvia bowleyana HOM05D006500 ORTHO05D008028 4.2e-63 245.0 136 81.6
THA.LOC104800923 Tarenaya hassleriana HOM05D006500 ORTHO05D008028 4.2e-63 245.0 133 83.5
Actinidia27113 Actinidia chinensis HOM05D006500 ORTHO05D008028 5.5e-63 244.6 147 75.5
Glyma.02G137600 Glycine max HOM05D006500 ORTHO05D008028 5.5e-63 244.6 161 71.4
Lalb_Chr09g0328101 Lupinus albus HOM05D006500 ORTHO05D008028 5.5e-63 244.6 148 75.7
vmacro00698 Vaccinium macrocarpon HOM05D006500 ORTHO05D008028 5.5e-63 244.6 147 75.5
A09p67320 Brassica napus HOM05D006500 ORTHO05D008028 7.2e-63 244.2 157 71.3
RcHm_v2.0_Chr4g0405941 Rosa chinensis HOM05D006500 ORTHO05D008028 7.2e-63 244.2 157 73.9
Atru.chr4.1419 Acer truncatum HOM05D006500 ORTHO05D008028 1.2e-62 243.4 148 77.0
Aqoxy2G00124 Aquilegia oxysepala HOM05D006500 ORTHO05D008028 1.2e-62 243.4 148 72.3
Hma1.2p1_0108F.1_g051720 Hydrangea macrophylla HOM05D006500 ORTHO05D008028 1.2e-62 243.4 149 75.2
Thhalv10008926m.g Eutrema salsugineum HOM05D006500 ORTHO05D008028 1.6e-62 243.0 163 68.7
BraA09t42063Z Brassica rapa HOM05D006500 ORTHO05D008028 2.1e-62 242.7 157 70.7
Ca_18638_v3 Cicer arietinum L. HOM05D006500 ORTHO05D008028 2.1e-62 242.7 141 77.3
Migut.G01179 Erythranthe guttata HOM05D006500 ORTHO05D008028 2.1e-62 242.7 142 76.8
CARHR005240 Cardamine hirsuta HOM05D006500 ORTHO05D008028 2.7e-62 242.3 161 70.8
HanXRQChr14g0433631 Helianthus annuus HOM05D003327 ORTHO05D004535 2.7e-62 242.3 139 78.4
CAN.G136.13 Capsicum annuum HOM05D006500 ORTHO05D008028 1.0e-61 240.4 137 80.3
Oeu015723.1 Olea europaea HOM05D006500 ORTHO05D008028 1.0e-61 240.4 137 79.6
Oeu050336.1 Olea europaea HOM05D006500 ORTHO05D008028 1.0e-61 240.4 150 74.0
Solyc06g053430.4 Solanum lycopersicum HOM05D006500 ORTHO05D008028 2.3e-61 239.2 137 80.3
Sopen06g018490 Solanum pennellii HOM05D006500 ORTHO05D008028 2.3e-61 239.2 137 80.3
PGSC0003DMG400016334 Solanum tuberosum HOM05D006500 ORTHO05D008028 2.3e-61 239.2 137 80.3
arahy.Tifrunner.gnm1.ann1.A3K5YX Arachis hypogaea HOM05D006500 ORTHO05D008028 3.0e-61 238.8 153 70.6
arahy.Tifrunner.gnm1.ann1.SHKR8E Arachis hypogaea HOM05D006500 ORTHO05D008028 3.0e-61 238.8 153 70.6
EL10Ac3g06088 Beta vulgaris HOM05D006500 ORTHO05D008028 5.2e-61 238.0 148 73.6
FAN17G0772 Fragaria x ananassa HOM05D006500 ORTHO05D008028 5.2e-61 238.0 156 73.7
Nn1g09644 Nelumbo nucifera HOM05D006500 ORTHO05D008028 6.8e-61 237.7 142 76.8
Nitab4.5_0001586g0010 Nicotiana tabacum HOM05D006500 ORTHO05D008028 6.8e-61 237.7 150 75.3
FAN12G2511 Fragaria x ananassa HOM05D006500 ORTHO05D008028 8.8e-61 237.3 158 73.4
Peaxi162Scf00180g00116 Petunia axillaris HOM05D006500 ORTHO05D008028 1.2e-60 236.9 137 78.1
FvH4_4g10450 Fragaria vesca HOM05D006500 ORTHO05D008028 3.4e-60 235.3 158 72.2
BcaB03g13492 Brassica carinata HOM05D006500 ORTHO05D008028 7.5e-60 234.2 137 75.2
BolC8t47013H Brassica oleracea HOM05D006500 ORTHO05D008028 1.3e-59 233.4 137 74.5
BcaC07g36846 Brassica carinata HOM05D006500 ORTHO05D008028 1.7e-59 233.0 137 74.5
C08p02210 Brassica napus HOM05D006500 ORTHO05D008028 1.7e-59 233.0 137 74.5
DCAR_023930 Daucus carota HOM05D006500 ORTHO05D008028 2.2e-59 232.6 131 78.6
Lsat_1_v5_gn_1_74920 Lactuca sativa HOM05D006500 ORTHO05D008028 2.2e-59 232.6 137 76.6
Nitab4.5_0002544g0040 Nicotiana tabacum HOM05D006500 ORTHO05D008028 2.2e-59 232.6 153 72.5
PSO675G9108 Papaver somniferum HOM05D006500 ORTHO05D008028 2.2e-59 232.6 137 75.2
PSO732G0103 Papaver somniferum HOM05D006500 ORTHO05D008028 2.2e-59 232.6 156 69.9
PGR083G1262 Punica granatum HOM05D006500 ORTHO05D008028 2.2e-59 232.6 152 71.1
A08p36310 Brassica napus HOM05D006500 ORTHO05D008028 4.9e-59 231.5 137 73.0
BraA08t35535Z Brassica rapa HOM05D006500 ORTHO05D008028 6.3e-59 231.1 137 73.0
AUR62002395 Chenopodium quinoa HOM05D006500 ORTHO05D008028 6.3e-59 231.1 152 71.1
AUR62023794 Chenopodium quinoa HOM05D006500 ORTHO05D008028 8.3e-59 230.7 151 71.5
Sc25g0002800 Simmondsia chinensis HOM05D006500 ORTHO05D008028 8.3e-59 230.7 145 71.0
Hund03202 Selenicereus undatus HOM05D006500 ORTHO05D008028 1.1e-58 230.3 154 68.8
Cc03_g14120 Coffea canephora HOM05D006500 ORTHO05D008028 1.4e-58 229.9 135 77.0
ATR0743G133 Amborella trichopoda HOM05D006500 ORTHO05D008028 5.9e-57 224.6 137 72.3
CDE04G3295 Ceratophyllum demersum HOM05D006500 ORTHO05D008028 5.9e-57 224.6 135 73.3
ECA248G2222 Erigeron canadensis HOM05D000003 ORTHO05D008028 5.9e-57 224.6 147 68.7
Os01g0894500 Oryza sativa ssp. japonica HOM05D006500 ORTHO05D008028 3.8e-56 221.9 150 66.7
Aa31LG1G8630 Aethionema arabicum HOM05D006500 ORTHO05D008028 1.1e-55 220.3 173 61.3
HPP92_003580 Vanilla planifolia HOM05D006500 ORTHO05D008028 2.5e-55 219.2 147 68.7
Zm00001eb144900 Zea mays HOM05D006500 ORTHO05D008028 2.8e-54 215.7 149 66.4
FAN22G1805 Fragaria x ananassa HOM05D006500 ORTHO05D008028 4.7e-54 214.9 203 56.2
unitig_46.g18636 Utricularia gibba HOM05D006500 ORTHO05D008028 6.1e-54 214.5 131 72.5
FAN07G0402 Fragaria x ananassa HOM05D006500 ORTHO05D008028 1.4e-53 213.4 205 56.6
FAN12G1276 Fragaria x ananassa HOM05D006500 ORTHO05D008028 3.0e-53 212.2 210 54.8
SEGI_07767 Sequoiadendron giganteum HOM05D006500 ORTHO05D008028 3.0e-53 212.2 131 71.8
Lj3A158T10 Lonicera japonica HOM05D006500 ORTHO05D008028 6.4e-51 204.5 133 72.2
Haze_01362 Corylus avellana HOM05D006500 ORTHO05D008028 5.0e-48 194.9 147 65.3
TPR.G23526 Trifolium pratense HOM05D006500 ORTHO05D008028 3.4e-44 182.2 97 83.5
SMO119G0117 Selaginella moellendorffii HOM05D006500 ORTHO05D008028 1.3e-43 180.3 128 63.3
BcaC07g42121 Brassica carinata HOM05D006500 ORTHO05D008028 2.2e-43 179.5 157 58.6
MBI08_g33171_MAGBIO Magnolia biondii HOM05D006500 ORTHO05D008028 8.3e-43 177.6 103 76.7
Pp3c14_2450 Physcomitrium patens HOM05D006500 ORTHO05D008028 1.1e-42 177.2 130 59.2
Nn1g09666 Nelumbo nucifera HOM05D006500 ORTHO05D008028 3.0e-32 142.5 83 75.9
Ciclev10023175m.g Citrus clementina HOM05D006500 ORTHO05D008028 6.6e-24 114.8 72 72.2
SHI33478 Sapria himalayana HOM05D000105 ORTHO05D000023 5.6e-23 111.7 83 60.2
Cre01.g038950 Chlamydomonas reinhardtii HOM05D006500 ORTHO05D008028 5.4e-18 95.1 154 36.4
CAN.G701.5 Capsicum annuum HOM05D006500 ORTHO05D008028 1.9e-15 86.7 86 51.2
CBR_g27901 Chara braunii HOM05D006500 ORTHO05D008028 5.8e-12 75.1 126 32.5


User provided reference genes

Program Settings