Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 6.8e-302 1040.0 586 100.0
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 1.7e-199 699.9 624 65.9
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 3.2e-187 659.1 605 63.6
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 9.5e-163 577.8 539 63.1
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 2.7e-64 250.8 658 32.7
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 2.7e-64 250.8 659 32.6
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 4.1e-57 226.9 626 32.4
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 8.6e-55 219.2 646 30.5
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 3.6e-53 213.8 626 30.7
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 2.3e-52 211.1 621 30.8
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 2.3e-52 211.1 718 29.9
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 4.4e-51 206.8 585 31.1
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 3.2e-49 200.7 628 28.8
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 1.3e-47 195.3 672 30.2
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 1.1e-46 192.2 598 28.6
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 2.1e-45 188.0 594 30.5
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 2.3e-44 184.5 657 28.5
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 8.9e-44 182.6 611 30.3
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 2.9e-42 177.6 637 29.0
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 3.7e-42 177.2 662 27.9
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 3.7e-42 177.2 597 28.0
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 8.3e-42 176.0 623 29.4
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 8.3e-42 176.0 391 36.6
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 4.1e-41 173.7 660 28.3
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 1.6e-40 171.8 586 28.5
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.1e-40 171.4 656 27.9
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 1.3e-39 168.7 630 28.1
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.5e-38 164.5 660 27.1
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 3.3e-38 164.1 605 27.8
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 3.3e-38 164.1 679 26.4
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 5.6e-38 163.3 625 26.1
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 9.5e-38 162.5 678 27.6
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 1.6e-37 161.8 633 28.4
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 3.6e-37 160.6 647 27.7
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 6.2e-37 159.8 637 27.6
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 1.8e-36 158.3 600 28.3
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 1.8e-36 158.3 635 27.9
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 8.9e-36 156.0 636 27.4
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 1.5e-35 155.2 631 28.8
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 9.9e-35 152.5 217 40.1
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 6.4e-34 149.8 610 27.7
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 1.9e-33 148.3 648 26.7
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 2.4e-33 147.9 673 30.3
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 4.1e-33 147.1 643 26.3
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 5.4e-33 146.7 160 49.4
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 7.1e-33 146.4 155 51.0
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 7.1e-33 146.4 579 26.8
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 9.2e-33 146.0 201 46.8
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 1.6e-32 145.2 642 30.5
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 6.0e-32 143.3 633 25.4
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 7.8e-32 142.9 417 31.4
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 7.8e-32 142.9 434 31.1
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 7.8e-32 142.9 163 47.9
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 1.0e-31 142.5 218 43.1
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 1.0e-31 142.5 701 26.1
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 1.7e-31 141.7 134 53.7
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 2.3e-31 141.4 158 49.4
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 2.3e-31 141.4 629 26.4
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 5.1e-31 140.2 664 27.4
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 6.6e-31 139.8 434 31.3
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 1.1e-30 139.0 523 27.5
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 3.3e-30 137.5 560 27.9
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 3.3e-30 137.5 164 47.6
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 3.3e-30 137.5 696 29.9
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 5.6e-30 136.7 147 50.3
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 1.2e-29 135.6 670 29.3
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.1e-29 134.8 211 41.2
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 2.1e-29 134.8 211 41.2
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 1.4e-28 132.1 624 26.9
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 3.1e-28 131.0 500 27.2
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 4.0e-28 130.6 196 40.3
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 2.6e-27 127.9 560 27.9
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 3.4e-27 127.5 134 51.5
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 4.4e-27 127.1 157 44.6
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 2.2e-26 124.8 379 31.4
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 2.9e-26 124.4 133 48.9
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 4.9e-26 123.6 805 23.5
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 1.9e-25 121.7 151 44.4
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 1.7e-23 115.2 360 32.8
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 9.6e-22 109.4 147 40.8
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 3.6e-21 107.5 140 40.0
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 4.8e-21 107.1 142 42.3
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 4.8e-21 107.1 194 35.6
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 1.4e-20 105.5 147 39.5
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 1.4e-20 105.5 206 36.9
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 1.8e-20 105.1 147 40.1
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 5.3e-20 103.6 135 40.0
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 5.3e-20 103.6 137 41.6
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 9.0e-20 102.8 145 40.0
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 1.5e-19 102.1 145 41.4
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 4.5e-19 100.5 524 24.4
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 2.9e-18 97.8 542 25.6
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 2.9e-18 97.8 213 31.5
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 6.4e-18 96.7 146 34.9
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 1.4e-17 95.5 152 37.5
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 4.6e-16 90.5 210 31.9
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 7.9e-16 89.7 190 32.6
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 3.9e-15 87.4 187 33.2
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 5.1e-15 87.0 477 23.3
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.1e-14 85.9 137 34.3
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.1e-14 85.9 137 34.3
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 1.9e-14 85.1 400 27.0
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 8.1e-13 79.7 127 32.3
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 3.1e-12 77.8 291 27.8
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 4.0e-12 77.4 64 62.5
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 5.8e-11 73.6 80 43.8
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 4.9e-10 70.5 114 38.6
Cc06_g11350 Coffea canephora HOM05D006771 ORTHO05D008296 1.4e-09 68.9 134 29.9
Sopen07g017540 Solanum pennellii HOM05D006771 ORTHO05D008296 1.9e-09 68.6 288 25.7


User provided reference genes

Program Settings