Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0013946 Sechium edule HOM05D005059 ORTHO05D004248 2.1e-33 145.2 77 100.0
ClCG01G023900 Citrullus lanatus HOM05D005059 ORTHO05D004248 1.3e-16 89.4 87 65.5
CiPaw.09G073100 Carya illinoinensis HOM05D005059 ORTHO05D004248 5.9e-12 73.9 61 60.7
QL05p049931 Quercus lobata HOM05D005059 ORTHO05D004248 1.3e-11 72.8 68 58.8
Psat7g068640 Pisum sativum HOM05D005059 ORTHO05D004248 3.8e-11 71.2 60 60.0
PGR042G3020 Punica granatum HOM05D005059 ORTHO05D004248 5.0e-11 70.9 60 61.7
Migut.H01411 Erythranthe guttata HOM05D005059 ORTHO05D004248 1.1e-10 69.7 60 56.7
CAN.G411.50 Capsicum annuum HOM05D005059 ORTHO05D004248 1.4e-10 69.3 68 52.9
Haze_06169 Corylus avellana HOM05D005059 ORTHO05D004248 1.4e-10 69.3 61 59.0
SalBow8G0022 Salvia bowleyana HOM05D005059 ORTHO05D004248 1.4e-10 69.3 59 61.0
Oeu060173.1 Olea europaea HOM05D005059 ORTHO05D004248 1.9e-10 68.9 61 54.1
Psat1g194640 Pisum sativum HOM05D005059 ORTHO05D004248 1.9e-10 68.9 62 59.7
RcHm_v2.0_Chr5g0011661 Rosa chinensis HOM05D005059 ORTHO05D004248 1.9e-10 68.9 54 66.7
TPR.G6728 Trifolium pratense HOM05D005059 ORTHO05D004248 1.9e-10 68.9 59 62.7
Cfa000656 Carpinus fangiana HOM05D005059 ORTHO05D004248 3.2e-10 68.2 63 58.7
Hma1.2p1_0113F.1_g055120 Hydrangea macrophylla HOM05D005059 ORTHO05D004248 3.2e-10 68.2 70 52.9
Prupe.4G067000 Prunus persica HOM05D005059 ORTHO05D004248 3.2e-10 68.2 54 63.0
DCAR_005145 Daucus carota HOM05D005059 ORTHO05D004248 4.2e-10 67.8 54 61.1
Glyma.05G161100 Glycine max HOM05D005059 ORTHO05D004248 4.2e-10 67.8 71 54.9
Medtr8g087390 Medicago truncatula HOM05D005059 ORTHO05D004248 4.2e-10 67.8 58 60.3
Oeu043118.1 Olea europaea HOM05D005059 ORTHO05D004248 4.2e-10 67.8 81 50.6
arahy.Tifrunner.gnm1.ann1.YXRF57 Arachis hypogaea HOM05D005059 ORTHO05D004248 5.5e-10 67.4 59 59.3
Glyma.08G118500 Glycine max HOM05D005059 ORTHO05D004248 5.5e-10 67.4 89 52.8
MD10G1275500 Malus domestica HOM05D005059 ORTHO05D004248 5.5e-10 67.4 55 61.8
Phvul.002G241108 Phaseolus vulgaris HOM05D005059 ORTHO05D004248 5.5e-10 67.4 97 52.6
Phvul.006G173000 Phaseolus vulgaris HOM05D005059 ORTHO05D004248 5.5e-10 67.4 64 56.2
Lj6g0009726 Lotus japonicus HOM05D005059 ORTHO05D004248 9.4e-10 66.6 64 56.2
SalBow7G3765 Salvia bowleyana HOM05D005059 ORTHO05D004248 9.4e-10 66.6 96 44.8
arahy.Tifrunner.gnm1.ann1.YNVN02 Arachis hypogaea HOM05D005059 ORTHO05D004248 1.6e-09 65.9 59 57.6
COL.COLO4_31233 Corchorus olitorius HOM05D005059 ORTHO05D004248 2.1e-09 65.5 59 59.3
Lsat_1_v5_gn_7_25601 Lactuca sativa HOM05D005059 ORTHO05D004248 2.7e-09 65.1 89 49.4
Oeu060178.1 Olea europaea HOM05D005059 ORTHO05D004248 2.7e-09 65.1 60 50.0
Cc02_g15600 Coffea canephora HOM05D005059 ORTHO05D004248 3.6e-09 64.7 52 63.5
Sabra04G0040600 Salix brachista HOM05D005059 ORTHO05D004248 3.6e-09 64.7 53 64.2
Ca_17896_v3 Cicer arietinum L. HOM05D005059 ORTHO05D004248 4.6e-09 64.3 52 63.5
Medtr2g016800 Medicago truncatula HOM05D005059 ORTHO05D004248 4.6e-09 64.3 63 55.6
Lalb_Chr15g0086331 Lupinus albus HOM05D005059 ORTHO05D004248 6.1e-09 63.9 59 57.6
Oeu040922.1 Olea europaea HOM05D005059 ORTHO05D004248 6.1e-09 63.9 82 47.6
TAR624G0770 Trochodendron aralioides HOM05D005059 ORTHO05D004248 6.1e-09 63.9 68 47.1
TAR624G0872 Trochodendron aralioides HOM05D005059 ORTHO05D004248 6.1e-09 63.9 65 47.7
Dinv12752 Davidia involucrata HOM05D005059 ORTHO05D004248 7.9e-09 63.5 56 58.9
Hma1.2p1_0373F.1_g138420 Hydrangea macrophylla HOM05D005059 ORTHO05D004248 7.9e-09 63.5 55 58.2
Potri.004G061300 Populus trichocarpa HOM05D005059 ORTHO05D004248 7.9e-09 63.5 53 64.2
TWI53G1149 Tripterygium wilfordii HOM05D005059 ORTHO05D004248 7.9e-09 63.5 53 62.3
Thecc.06G165400 Theobroma cacao HOM05D005059 ORTHO05D004248 1.0e-08 63.2 95 45.3
DCAR_027980 Daucus carota HOM05D005059 ORTHO05D004248 1.4e-08 62.8 53 60.4
MD00G1009200 Malus domestica HOM05D005059 ORTHO05D004248 1.4e-08 62.8 96 44.8
MD00G1221100 Malus domestica HOM05D005059 ORTHO05D004248 1.4e-08 62.8 96 44.8
CSS0000215 Camellia sinensis var. sinensis HOM05D005059 ORTHO05D004248 2.3e-08 62.0 71 49.3
CSS0038855 Camellia sinensis var. sinensis HOM05D005059 ORTHO05D004248 2.3e-08 62.0 84 47.6
Glyma.13G226600 Glycine max HOM05D005059 ORTHO05D004248 3.0e-08 61.6 54 57.4
Nn6g34461 Nelumbo nucifera HOM05D005059 ORTHO05D004248 3.0e-08 61.6 84 45.2
SGA_v2.0_scaffold1G00085 Striga asiatica HOM05D005059 ORTHO05D004248 3.0e-08 61.6 54 61.1
MSTRG.13233 Avicennia marina HOM05D005059 ORTHO05D004248 3.9e-08 61.2 88 45.5
Nn3g21078 Nelumbo nucifera HOM05D005059 ORTHO05D004248 3.9e-08 61.2 96 45.8
Rhsim04G0027000 Rhododendron simsii HOM05D002453 ORTHO05D008746 3.9e-08 61.2 61 49.2
Ca_00473_v3 Cicer arietinum L. HOM05D005059 ORTHO05D004248 5.1e-08 60.8 98 45.9
Lj4g0014521 Lotus japonicus HOM05D005059 ORTHO05D004248 5.1e-08 60.8 58 55.2
MBI07_g00460_MAGBIO Magnolia biondii HOM05D005059 ORTHO05D004248 5.1e-08 60.8 59 54.2
FvH4_3g07300 Fragaria vesca HOM05D005059 ORTHO05D004248 6.7e-08 60.5 100 44.0
FAN11G2282 Fragaria x ananassa HOM05D005059 ORTHO05D004248 6.7e-08 60.5 100 44.0
FAN16G0464 Fragaria x ananassa HOM05D005059 ORTHO05D004248 6.7e-08 60.5 97 43.3
Thhalv10009585m.g Eutrema salsugineum HOM05D005059 ORTHO05D004248 8.8e-08 60.1 59 54.2
FAN21G0043 Fragaria x ananassa HOM05D005059 ORTHO05D004248 8.8e-08 60.1 100 44.0
FAN25G1124 Fragaria x ananassa HOM05D005059 ORTHO05D004248 8.8e-08 60.1 100 44.0
Glyma.15G085800 Glycine max HOM05D005059 ORTHO05D004248 8.8e-08 60.1 49 61.2
Sopen02g021130 Solanum pennellii HOM05D005059 ORTHO05D004248 8.8e-08 60.1 81 46.9
PGSC0003DMG400028485 Solanum tuberosum HOM05D005059 ORTHO05D004248 1.1e-07 59.7 77 46.8
CARHR028610 Cardamine hirsuta HOM05D005059 ORTHO05D004248 1.5e-07 59.3 59 54.2
Gohir.A05G153400 Gossypium hirsutum HOM05D005059 ORTHO05D004248 1.5e-07 59.3 70 51.4
BcaB07g32517 Brassica carinata HOM05D005059 ORTHO05D004248 2.0e-07 58.9 59 54.2
TAR626G0600 Trochodendron aralioides HOM05D005059 ORTHO05D004248 2.0e-07 58.9 80 43.8
AL1G43080 Arabidopsis lyrata HOM05D005059 ORTHO05D004248 2.6e-07 58.5 59 52.5
A07p10740 Brassica napus HOM05D005059 ORTHO05D004248 2.6e-07 58.5 59 52.5
A09p37060 Brassica napus HOM05D005059 ORTHO05D004248 2.6e-07 58.5 59 52.5
BraA07t28869Z Brassica rapa HOM05D005059 ORTHO05D004248 2.6e-07 58.5 59 52.5
BraA09t39221Z Brassica rapa HOM05D005059 ORTHO05D004248 2.6e-07 58.5 59 52.5
BcaB03g13892 Brassica carinata HOM05D005059 ORTHO05D004248 3.3e-07 58.2 59 52.5
CiPaw.10G061800 Carya illinoinensis HOM05D005059 ORTHO05D004248 3.3e-07 58.2 64 56.2
AT1G29290 Arabidopsis thaliana HOM05D005059 ORTHO05D004248 4.4e-07 57.8 59 52.5
BcaC05g26955 Brassica carinata HOM05D005059 ORTHO05D004248 4.4e-07 57.8 59 52.5
C05p28050 Brassica napus HOM05D005059 ORTHO05D004248 4.4e-07 57.8 59 52.5
BolC5t31533H Brassica oleracea HOM05D005059 ORTHO05D004248 4.4e-07 57.8 59 52.5
MBI06_g16696_MAGBIO Magnolia biondii HOM05D005059 ORTHO05D004248 4.4e-07 57.8 89 43.8
Sp1g25220 Schrenkiella parvula HOM05D005059 ORTHO05D004248 4.4e-07 57.8 59 52.5
Gohir.D05G156000 Gossypium hirsutum HOM05D005059 ORTHO05D004248 7.4e-07 57.0 70 50.0
Gorai.009G160500 Gossypium raimondii HOM05D005059 ORTHO05D004248 7.4e-07 57.0 70 50.0
BcaC06g35423 Brassica carinata HOM05D005059 ORTHO05D004248 9.7e-07 56.6 60 51.7
C07p16340 Brassica napus HOM05D005059 ORTHO05D004248 9.7e-07 56.6 60 51.7
BolC7t42128H Brassica oleracea HOM05D005059 ORTHO05D004248 9.7e-07 56.6 60 51.7
BcaB03g12151 Brassica carinata HOM05D005059 ORTHO05D004248 1.3e-06 56.2 59 52.5
TPR.G4530 Trifolium pratense HOM05D005059 ORTHO05D004248 1.3e-06 56.2 42 59.5
MSTRG.7430 Avicennia marina HOM05D005059 ORTHO05D004248 1.7e-06 55.8 60 51.7
Dinv32337 Davidia involucrata HOM05D005059 ORTHO05D004248 2.2e-06 55.5 79 49.4
Eucgr.D00466 Eucalyptus grandis HOM05D005059 ORTHO05D004248 2.8e-06 55.1 72 47.2
DCAR_027979 Daucus carota HOM05D005059 ORTHO05D004248 3.7e-06 54.7 56 48.2
Manes.17G059300 Manihot esculenta HOM05D005059 ORTHO05D004248 4.8e-06 54.3 53 54.7
Oeu061362.1 Olea europaea HOM05D005059 ORTHO05D004248 4.8e-06 54.3 90 40.0
Ciclev10018148m.g Citrus clementina HOM05D005059 ORTHO05D004248 6.3e-06 53.9 53 58.5
TAR629G2882 Trochodendron aralioides HOM05D005059 ORTHO05D004248 6.3e-06 53.9 68 44.1
BcaC01g00093 Brassica carinata HOM05D005059 ORTHO05D004248 8.2e-06 53.5 59 50.8
A08p25180 Brassica napus HOM05D005059 ORTHO05D004248 8.2e-06 53.5 59 50.8
C03p75700 Brassica napus HOM05D005059 ORTHO05D004248 8.2e-06 53.5 59 50.8
BolC3t19830H Brassica oleracea HOM05D005059 ORTHO05D004248 8.2e-06 53.5 59 50.8
BraA08t34472Z Brassica rapa HOM05D005059 ORTHO05D004248 8.2e-06 53.5 59 50.8
Migut.M01008 Erythranthe guttata HOM05D005059 ORTHO05D004248 8.2e-06 53.5 64 48.4
Hma1.2p1_1016F.1_g248040 Hydrangea macrophylla HOM05D005059 ORTHO05D004248 8.2e-06 53.5 55 50.9


User provided reference genes

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