Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0013839 Sechium edule HOM05D001626 ORTHO05D001563 2.4e-110 402.1 199 100.0
CsaV3_4G035830 Cucumis sativus L. HOM05D001626 ORTHO05D001563 8.2e-58 227.6 170 70.6
MELO3C016888.2 Cucumis melo HOM05D001626 ORTHO05D001563 1.8e-57 226.5 169 70.4
ClCG05G018060 Citrullus lanatus HOM05D001626 ORTHO05D001563 1.5e-56 223.4 211 58.8
Dinv41822 Davidia involucrata HOM05D001626 ORTHO05D001563 5.6e-22 108.6 170 42.9
Dinv12446 Davidia involucrata HOM05D001626 ORTHO05D001563 3.0e-20 102.8 150 45.3
MSTRG.1696 Avicennia marina HOM05D001626 ORTHO05D001563 4.4e-19 99.0 176 38.6
Prupe.1G408300 Prunus persica HOM05D001626 ORTHO05D001563 9.8e-19 97.8 173 40.5
GSVIVG01035417001 Vitis vinifera HOM05D001626 ORTHO05D001563 9.8e-19 97.8 169 40.8
CSS0026844 Camellia sinensis var. sinensis HOM05D001626 ORTHO05D001563 1.3e-18 97.4 169 39.6
Manes.03G050600 Manihot esculenta HOM05D001626 ORTHO05D001563 1.1e-17 94.4 159 39.6
TAR636G0010 Trochodendron aralioides HOM05D001626 ORTHO05D001563 1.1e-17 94.4 170 38.2
Migut.E01583 Erythranthe guttata HOM05D001626 ORTHO05D001563 9.2e-17 91.3 177 37.9
PGR031G3406 Punica granatum HOM05D001626 ORTHO05D001563 9.2e-17 91.3 175 41.7
Ciclev10009319m.g Citrus clementina HOM05D001626 ORTHO05D001563 2.0e-16 90.1 169 37.3
Eucgr.C00672 Eucalyptus grandis HOM05D001626 ORTHO05D001563 3.5e-16 89.4 166 38.6
SalBow1G4900 Salvia bowleyana HOM05D001626 ORTHO05D001563 3.5e-16 89.4 137 38.7
Aqoxy7G04005 Aquilegia oxysepala HOM05D001626 ORTHO05D001563 5.9e-16 88.6 172 36.6
Potri.006G224900 Populus trichocarpa HOM05D001626 ORTHO05D001563 5.9e-16 88.6 197 34.0
Lj8A523G41 Lonicera japonica HOM05D001626 ORTHO05D001563 7.8e-16 88.2 176 40.9
CiPaw.16G026500 Carya illinoinensis HOM05D001626 ORTHO05D001563 3.9e-15 85.9 168 35.1
Actinidia29324 Actinidia chinensis HOM05D001626 ORTHO05D001563 6.6e-15 85.1 171 35.7
AUR62000403 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-13 80.9 147 39.5
Sabra06G0173900 Salix brachista HOM05D001626 ORTHO05D001563 1.2e-13 80.9 193 34.2
Hma1.2p1_0196F.1_g084880 Hydrangea macrophylla HOM05D001626 ORTHO05D001563 2.1e-13 80.1 169 37.3
AUR62006760 Chenopodium quinoa HOM05D001626 ORTHO05D001563 2.8e-13 79.7 125 43.2
MD08G1066100 Malus domestica HOM05D001626 ORTHO05D001563 2.8e-13 79.7 172 40.7
Haze_18147 Corylus avellana HOM05D001626 ORTHO05D001563 6.2e-13 78.6 142 38.7
Rhsim07G0160100 Rhododendron simsii HOM05D001626 ORTHO05D001563 1.1e-12 77.8 165 37.0
EL10Ac4g09479 Beta vulgaris HOM05D001626 ORTHO05D001563 3.1e-12 76.3 124 41.1
Lalb_Chr23g0267891 Lupinus albus HOM05D001626 ORTHO05D001563 3.1e-12 76.3 175 36.0
FAN15G1412 Fragaria x ananassa HOM05D001626 ORTHO05D001563 5.2e-12 75.5 234 32.5
TWI32G0892 Tripterygium wilfordii HOM05D001626 ORTHO05D001563 6.8e-12 75.1 120 45.0
FvH4_2g31470 Fragaria vesca HOM05D001626 ORTHO05D001563 8.9e-12 74.7 213 31.9
Psat0s1916g0120 Pisum sativum HOM05D001626 ORTHO05D001563 1.5e-11 73.9 169 36.1
FAN24G0585 Fragaria x ananassa HOM05D001626 ORTHO05D001563 2.6e-11 73.2 202 31.7
Phvul.009G079800 Phaseolus vulgaris HOM05D001626 ORTHO05D001563 2.6e-11 73.2 170 34.1
QL02p000629 Quercus lobata HOM05D001626 ORTHO05D001563 2.6e-11 73.2 170 34.7
MD15G1055100 Malus domestica HOM05D001626 ORTHO05D001563 4.4e-11 72.4 169 37.3
VMungo1309G3042 Vigna mungo HOM05D001626 ORTHO05D001563 5.8e-11 72.0 169 34.3
Ca_15818_v3 Cicer arietinum L. HOM05D001626 ORTHO05D001563 9.8e-11 71.2 170 34.7
Ca_15852_v3 Cicer arietinum L. HOM05D001626 ORTHO05D001563 9.8e-11 71.2 170 34.7
Medtr3g104670 Medicago truncatula HOM05D001626 ORTHO05D001563 9.8e-11 71.2 169 36.1
DCAR_000808 Daucus carota HOM05D001626 ORTHO05D001563 1.7e-10 70.5 118 41.5
Oeu047093.1 Olea europaea HOM05D001626 ORTHO05D001563 2.2e-10 70.1 129 39.5
Glyma.04G054000 Glycine max HOM05D001626 ORTHO05D001563 3.7e-10 69.3 168 35.7
Sc23g0005780 Simmondsia chinensis HOM05D001626 ORTHO05D001563 6.4e-10 68.6 169 32.5
HanXRQChr12g0358771 Helianthus annuus HOM05D001626 ORTHO05D001563 8.3e-10 68.2 164 34.1
CDE02G4441 Ceratophyllum demersum HOM05D001626 ORTHO05D001563 1.1e-09 67.8 154 33.1
Hund03312 Selenicereus undatus HOM05D001626 ORTHO05D001563 1.4e-09 67.4 131 37.4
ECA234G2108 Erigeron canadensis HOM05D001626 ORTHO05D001563 1.9e-09 67.0 171 32.2
Glyma.06G054300 Glycine max HOM05D001626 ORTHO05D001563 1.9e-09 67.0 169 33.7
Nn6g35548 Nelumbo nucifera HOM05D001626 ORTHO05D001563 1.9e-09 67.0 169 34.9
TPR.G3535 Trifolium pratense HOM05D001626 ORTHO05D001563 3.2e-09 66.2 170 35.3
RcHm_v2.0_Chr6g0311331 Rosa chinensis HOM05D001626 ORTHO05D001563 5.4e-09 65.5 213 30.0
Cpa.g.sc7.148 Carica papaya HOM05D001626 ORTHO05D001563 9.2e-09 64.7 122 41.8
CDE04G3102 Ceratophyllum demersum HOM05D002641 ORTHO05D001537 1.2e-08 64.3 157 33.1
Cc08_g10970 Coffea canephora HOM05D001626 ORTHO05D001563 7.8e-08 61.6 120 40.0
FAN20G1752 Fragaria x ananassa HOM05D001626 ORTHO05D001563 3.0e-07 59.7 213 29.6
CARHR070440 Cardamine hirsuta HOM05D001626 ORTHO05D001563 3.3e-06 56.2 116 33.6
HPP92_011471 Vanilla planifolia HOM05D001626 ORTHO05D001563 7.3e-06 55.1 159 30.2


User provided reference genes

Program Settings