Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0013830 Sechium edule HOM05D006516 ORTHO05D008083 1.7e-150 536.2 312 100.0
MELO3C023197.2 Cucumis melo HOM05D006516 ORTHO05D008083 2.7e-124 449.1 331 78.5
CsaV3_2G019760 Cucumis sativus L. HOM05D006516 ORTHO05D008083 1.0e-123 447.2 331 76.4
RcHm_v2.0_Chr2g0122781 Rosa chinensis HOM05D006516 ORTHO05D008083 5.3e-104 381.7 225 84.0
Atru.chr4.1049 Acer truncatum HOM05D006516 ORTHO05D008083 4.5e-103 378.6 224 83.9
Prupe.4G278200 Prunus persica HOM05D006516 ORTHO05D008083 1.9e-101 373.2 218 84.4
Ciclev10001875m.g Citrus clementina HOM05D006516 ORTHO05D008083 5.5e-101 371.7 218 83.9
MD00G1064700 Malus domestica HOM05D006516 ORTHO05D008083 2.1e-100 369.8 225 81.8
CSS0037144 Camellia sinensis var. sinensis HOM05D006516 ORTHO05D008083 2.7e-100 369.4 218 81.7
Eucgr.I00111 Eucalyptus grandis HOM05D006516 ORTHO05D008083 6.1e-100 368.2 218 83.0
TAR628G0816 Trochodendron aralioides HOM05D006516 ORTHO05D008083 6.1e-100 368.2 219 80.4
Manes.12G147400 Manihot esculenta HOM05D006516 ORTHO05D008083 1.0e-99 367.5 220 84.1
CANSAT01G0949 Cannabis sativa HOM05D006516 ORTHO05D008083 1.8e-99 366.7 215 84.7
THA.LOC104804401 Tarenaya hassleriana HOM05D006516 ORTHO05D008083 1.8e-99 366.7 219 81.3
Dinv30343 Davidia involucrata HOM05D006516 ORTHO05D008083 2.3e-99 366.3 219 81.7
Potri.007G099900 Populus trichocarpa HOM05D006516 ORTHO05D008083 2.3e-99 366.3 220 81.4
AL7G18070 Arabidopsis lyrata HOM05D006516 ORTHO05D008083 4.0e-99 365.5 214 82.7
BcaC09g52164 Brassica carinata HOM05D006516 ORTHO05D008083 6.7e-99 364.8 215 82.8
FAN26G1784 Fragaria x ananassa HOM05D006516 ORTHO05D008083 6.7e-99 364.8 220 80.0
Sabra07G0082800 Salix brachista HOM05D006516 ORTHO05D008083 2.0e-98 363.2 220 80.9
Thecc.01G139400 Theobroma cacao HOM05D006516 ORTHO05D008083 2.6e-98 362.8 219 82.6
Carub.0007s0699 Capsella rubella HOM05D006516 ORTHO05D008083 3.3e-98 362.5 214 81.8
CARHR241560 Cardamine hirsuta HOM05D006516 ORTHO05D008083 3.3e-98 362.5 214 82.2
AT4G33480 Arabidopsis thaliana HOM05D006516 ORTHO05D008083 4.4e-98 362.1 214 81.8
FAN28G2638 Fragaria x ananassa HOM05D006516 ORTHO05D008083 4.4e-98 362.1 220 79.5
Solyc04g015480.3 Solanum lycopersicum HOM05D006516 ORTHO05D008083 7.5e-98 361.3 219 79.0
Sopen04g007550 Solanum pennellii HOM05D006516 ORTHO05D008083 7.5e-98 361.3 219 79.0
AUR62000533 Chenopodium quinoa HOM05D006516 ORTHO05D008083 4.8e-97 358.6 218 79.4
Oeu011021.1 Olea europaea HOM05D006516 ORTHO05D008083 4.8e-97 358.6 218 80.3
PGR119G1413 Punica granatum HOM05D006516 ORTHO05D008083 8.2e-97 357.8 214 81.8
CiPaw.03G117200 Carya illinoinensis HOM05D006516 ORTHO05D008083 2.4e-96 356.3 221 81.4
HanXRQChr15g0469261 Helianthus annuus HOM05D006516 ORTHO05D008083 1.6e-95 353.6 225 76.4
C01p05200 Brassica napus HOM05D006516 ORTHO05D008083 2.0e-95 353.2 221 78.3
A01p04790 Brassica napus HOM05D006516 ORTHO05D008083 4.5e-95 352.1 215 80.0
BraA01t00462Z Brassica rapa HOM05D006516 ORTHO05D008083 4.5e-95 352.1 215 80.0
Lsat_1_v5_gn_5_69121 Lactuca sativa HOM05D006516 ORTHO05D008083 4.5e-95 352.1 218 78.9
TWI31G0808 Tripterygium wilfordii HOM05D006516 ORTHO05D008083 4.5e-95 352.1 217 77.9
EL10Ac4g09645 Beta vulgaris HOM05D006516 ORTHO05D008083 5.9e-95 351.7 218 74.8
Gohir.D04G033500 Gossypium hirsutum HOM05D006516 ORTHO05D008083 5.9e-95 351.7 219 80.8
FAN19G1952 Fragaria x ananassa HOM05D006516 ORTHO05D008083 7.7e-95 351.3 221 78.7
Migut.H00817 Erythranthe guttata HOM05D006516 ORTHO05D008083 1.7e-94 350.1 225 77.3
Gohir.A05G381800 Gossypium hirsutum HOM05D006516 ORTHO05D008083 1.7e-94 350.1 219 80.4
Aqoxy6G00267 Aquilegia oxysepala HOM05D006516 ORTHO05D008083 3.8e-94 349.0 223 75.3
CDE08G1595 Ceratophyllum demersum HOM05D006516 ORTHO05D008083 3.8e-94 349.0 218 75.2
QL10p040847 Quercus lobata HOM05D006516 ORTHO05D008083 5.0e-94 348.6 219 79.5
MSTRG.23495 Avicennia marina HOM05D006516 ORTHO05D008083 8.5e-94 347.8 219 77.2
Cpa.g.sc37.17 Carica papaya HOM05D006516 ORTHO05D008083 8.5e-94 347.8 219 80.8
ECA233G3512 Erigeron canadensis HOM05D000595 ORTHO05D006275 4.2e-93 345.5 220 75.9
PSO170G3530 Papaver somniferum HOM05D006516 ORTHO05D008083 7.2e-93 344.7 219 77.2
FAN23G2617 Fragaria x ananassa HOM05D006516 ORTHO05D008083 6.1e-92 341.7 218 77.1
Sc06g0006730 Simmondsia chinensis HOM05D006516 ORTHO05D008083 6.8e-91 338.2 211 75.4
BolC1t00500H Brassica oleracea HOM05D006516 ORTHO05D008021 1.4e-88 330.5 201 79.6
Cc02_g33920 Coffea canephora HOM05D006516 ORTHO05D008083 1.4e-88 330.5 204 79.4
Nitab4.5_0001663g0100 Nicotiana tabacum HOM05D006516 ORTHO05D008083 5.4e-88 328.6 243 70.4
Haze_25362 Corylus avellana HOM05D006516 ORTHO05D008083 1.6e-87 327.0 217 77.0
DCAR_019988 Daucus carota HOM05D006516 ORTHO05D008083 3.5e-87 325.9 199 75.9
Actinidia06588 Actinidia chinensis HOM05D006516 ORTHO05D008083 5.9e-87 325.1 218 76.1
unitig_899.g15157 Utricularia gibba HOM05D006516 ORTHO05D008083 1.0e-86 324.3 204 73.5
arahy.Tifrunner.gnm1.ann1.YP7URC Arachis hypogaea HOM05D006516 ORTHO05D008083 1.3e-86 323.9 211 73.0
Actinidia20043 Actinidia chinensis HOM05D006516 ORTHO05D008083 2.2e-86 323.2 218 75.2
Glyma.05G194700 Glycine max HOM05D006516 ORTHO05D008083 2.9e-86 322.8 214 74.8
GSVIVG01022337001 Vitis vinifera HOM05D006516 ORTHO05D008083 2.5e-85 319.7 198 79.8
Cfa002190 Carpinus fangiana HOM05D006516 ORTHO05D008083 2.1e-84 316.6 291 60.1
Duzib147G1587 Durio zibethinus HOM05D006516 ORTHO05D008083 2.1e-84 316.6 210 77.1
Hund07224 Selenicereus undatus HOM05D006516 ORTHO05D008083 8.0e-84 314.7 219 68.0
SGA_v2.0_scaffold54G19604 Striga asiatica HOM05D006516 ORTHO05D008083 8.0e-84 314.7 210 71.0
arahy.Tifrunner.gnm1.ann1.8KJ0MH Arachis hypogaea HOM05D006516 ORTHO05D008083 4.0e-83 312.4 196 74.5
Lj4g0011477 Lotus japonicus HOM05D006516 ORTHO05D008083 4.0e-83 312.4 225 69.3
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 8.8e-83 311.2 225 68.4
Lalb_Chr13g0296721 Lupinus albus HOM05D006516 ORTHO05D008083 1.5e-82 310.5 211 71.1
PSO528G0185 Papaver somniferum HOM05D006516 ORTHO05D008083 2.6e-82 309.7 196 78.1
CDE06G0289 Ceratophyllum demersum HOM05D000237 ORTHO05D008083 4.4e-82 308.9 197 76.1
FvH4_1g25120 Fragaria vesca HOM05D006516 ORTHO05D008083 3.7e-81 305.8 174 84.5
CAN.G676.43 Capsicum annuum HOM05D006516 ORTHO05D008083 4.9e-81 305.4 218 70.6
Lalb_Chr08g0238111 Lupinus albus HOM05D006516 ORTHO05D008083 4.9e-81 305.4 216 69.4
Thhalv10025682m.g Eutrema salsugineum HOM05D006516 ORTHO05D008083 6.3e-81 305.1 177 81.9
PSO063G7430 Papaver somniferum HOM05D006516 ORTHO05D008083 8.3e-81 304.7 196 77.0
PGSC0003DMG400027234 Solanum tuberosum HOM05D006516 ORTHO05D008083 1.1e-80 304.3 251 63.3
Lj1g0010918 Lotus japonicus HOM05D006516 ORTHO05D008083 2.0e-79 300.1 213 71.4
AUR62006880 Chenopodium quinoa HOM05D006516 ORTHO05D008083 2.9e-78 296.2 309 52.4
Glyma.06G156800 Glycine max HOM05D006516 ORTHO05D008083 2.9e-78 296.2 216 71.3
Gorai.012G037800 Gossypium raimondii HOM05D006516 ORTHO05D008083 1.9e-77 293.5 182 79.1
arahy.Tifrunner.gnm1.ann1.I5MJF2 Arachis hypogaea HOM05D006516 ORTHO05D008083 2.1e-76 290.0 213 67.6
VMungo1309G1214 Vigna mungo HOM05D006516 ORTHO05D008083 3.6e-76 289.3 216 69.9
Medtr8g094200 Medicago truncatula HOM05D006516 ORTHO05D008083 1.4e-75 287.3 209 64.1
Ca_17618_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 4.0e-75 285.8 202 65.8
Psat5g086920 Pisum sativum HOM05D006516 ORTHO05D008083 1.5e-74 283.9 213 66.7
COL.COLO4_12072 Corchorus olitorius HOM05D006516 ORTHO05D008083 3.4e-74 282.7 220 65.9
Zm00001eb434490 Zea mays HOM05D006516 ORTHO05D008083 2.9e-73 279.6 213 63.4
arahy.Tifrunner.gnm1.ann1.5F6SWA Arachis hypogaea HOM05D006516 ORTHO05D008083 3.7e-73 279.3 227 63.9
TPR.G37339 Trifolium pratense HOM05D006516 ORTHO05D008083 2.3e-70 270.0 206 60.2
Ca_16991_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 3.2e-64 249.6 253 54.2
Ca_17019_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 3.2e-64 249.6 253 54.2
Psat7g044240 Pisum sativum HOM05D006516 ORTHO05D008083 3.2e-64 249.6 211 55.9
Medtr3g096860 Medicago truncatula HOM05D006516 ORTHO05D008083 9.2e-64 248.1 187 64.7
ClCG02G000090 Citrullus lanatus HOM05D006516 ORTHO05D008083 1.6e-63 247.3 217 67.3
Phvul.009G153500 Phaseolus vulgaris HOM05D006516 ORTHO05D008083 3.9e-62 242.7 179 69.8
CiPaw.04G078600 Carya illinoinensis HOM05D006516 ORTHO05D008083 5.2e-59 232.3 221 57.5
ATR0138G020 Amborella trichopoda HOM05D006516 ORTHO05D008083 3.4e-58 229.6 146 71.9
TPR.G33574 Trifolium pratense HOM05D006516 ORTHO05D008083 4.9e-57 225.7 171 64.9
Mapoly0149s0016 Marchantia polymorpha HOM05D006516 ORTHO05D008083 2.7e-55 219.9 212 51.9
Sp7g31210 Schrenkiella parvula HOM05D006516 ORTHO05D008083 4.6e-55 219.2 127 83.5
Pp3c3_32640 Physcomitrium patens HOM05D006516 ORTHO05D008083 9.5e-53 211.5 215 51.2
Aa31sc146G60 Aethionema arabicum HOM05D006516 ORTHO05D008083 1.6e-52 210.7 130 77.7
Nn1g08886 Nelumbo nucifera HOM05D006516 ORTHO05D008083 1.6e-52 210.7 129 78.3
Peaxi162Scf01713g00018 Petunia axillaris HOM05D006516 ORTHO05D008083 1.4e-51 207.6 129 75.2
AagrBONN_evm.TU.Sc2ySwM_369.382 Anthoceros agrestis HOM05D006516 ORTHO05D008083 6.8e-51 205.3 213 50.7
Nitab4.5_0000733g0220 Nicotiana tabacum HOM05D006516 ORTHO05D008083 9.9e-50 201.4 150 64.7
Rhsim10G0127700 Rhododendron simsii HOM05D006516 ORTHO05D008083 1.0e-46 191.4 192 51.6
MBI06_g45441_MAGBIO Magnolia biondii HOM05D006516 ORTHO05D008083 7.6e-42 175.3 216 48.6
Nn1g08902 Nelumbo nucifera HOM05D006516 ORTHO05D008083 4.0e-35 152.9 90 80.0
Aa31sc146G50 Aethionema arabicum HOM05D006516 ORTHO05D008083 2.6e-34 150.2 90 77.8
Hma1.2p1_1551F.1_g290160 Hydrangea macrophylla HOM05D006516 ORTHO05D008083 8.4e-33 145.2 82 80.5
CBR_g51961 Chara braunii HOM05D006516 ORTHO05D008083 4.9e-25 119.4 233 32.6
Peaxi162Scf01713g00017 Petunia axillaris HOM05D006516 ORTHO05D008083 3.5e-23 113.2 69 84.1
PRCOL_00004760 Prasinoderma coloniale HOM05D006516 ORTHO05D008083 3.1e-19 100.1 167 34.1
Nn1g08901 Nelumbo nucifera HOM05D003028 ORTHO05D003465 5.3e-19 99.4 156 39.1
Sp7g31200 Schrenkiella parvula HOM05D006516 ORTHO05D008083 1.2e-18 98.2 61 80.3
MCO05G028 Micromonas commoda HOM05D006516 ORTHO05D008083 4.9e-17 92.8 175 33.7
COL.COLO4_30311 Corchorus olitorius HOM05D000221 ORTHO05D008083 9.7e-13 78.6 48 83.3
FAN28G1699 Fragaria x ananassa HOM05D006516 ORTHO05D008083 6.9e-11 72.4 48 79.2
MBI06_g33106_MAGBIO Magnolia biondii HOM05D006516 ORTHO05D008083 7.6e-10 68.9 67 53.7


User provided reference genes

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