Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0013658 Sechium edule HOM05D006956 ORTHO05D008824 8.3e-85 317.0 160 100.0
MELO3C019670.2 Cucumis melo HOM05D006956 ORTHO05D008824 6.8e-71 270.8 155 86.5
CsaV3_6G013760 Cucumis sativus L. HOM05D006956 ORTHO05D008824 2.0e-70 269.2 156 86.5
ClCG02G018480 Citrullus lanatus HOM05D006956 ORTHO05D008824 3.5e-67 258.5 175 75.4
GSVIVG01020406001 Vitis vinifera HOM05D006956 ORTHO05D008824 5.2e-63 244.6 157 77.7
Dinv19614 Davidia involucrata HOM05D006956 ORTHO05D008824 9.8e-62 240.4 155 76.8
Gorai.007G335600 Gossypium raimondii HOM05D006956 ORTHO05D008824 1.9e-60 236.1 153 76.5
MD10G1203100 Malus domestica HOM05D006956 ORTHO05D008824 2.4e-60 235.7 152 75.7
Thecc.07G151600 Theobroma cacao HOM05D006956 ORTHO05D008824 4.1e-60 235.0 153 75.8
CiPaw.11G066300 Carya illinoinensis HOM05D006956 ORTHO05D008824 5.4e-60 234.6 155 76.1
TWI39G0297 Tripterygium wilfordii HOM05D006956 ORTHO05D008824 5.4e-60 234.6 153 75.2
TAR362G0399 Trochodendron aralioides HOM05D006956 ORTHO05D008824 5.4e-60 234.6 155 74.2
CAN.G710.39 Capsicum annuum HOM05D006956 ORTHO05D008824 1.2e-59 233.4 152 73.0
Solyc09g098220.3 Solanum lycopersicum HOM05D006956 ORTHO05D008824 1.6e-59 233.0 152 73.0
Sopen09g036160 Solanum pennellii HOM05D006956 ORTHO05D008824 1.6e-59 233.0 152 73.0
Nn7g38051 Nelumbo nucifera HOM05D006956 ORTHO05D008824 2.7e-59 232.3 155 72.3
Phvul.005G057800 Phaseolus vulgaris HOM05D006956 ORTHO05D008824 2.7e-59 232.3 156 69.9
QL04p076576 Quercus lobata HOM05D006956 ORTHO05D008824 2.7e-59 232.3 155 75.5
Peaxi162Scf00286g00448 Petunia axillaris HOM05D006956 ORTHO05D008824 3.5e-59 231.9 152 72.4
Psat1g012040 Pisum sativum HOM05D006956 ORTHO05D008824 4.6e-59 231.5 156 69.2
Lj3g0018815 Lotus japonicus HOM05D006956 ORTHO05D008824 6.0e-59 231.1 156 70.5
COL.COLO4_07377 Corchorus olitorius HOM05D006956 ORTHO05D008824 1.0e-58 230.3 153 74.5
Potri.001G439000 Populus trichocarpa HOM05D006956 ORTHO05D008824 1.3e-58 229.9 153 74.5
Rhsim04G0005600 Rhododendron simsii HOM05D006956 ORTHO05D008824 1.3e-58 229.9 155 71.6
Cfa010808 Carpinus fangiana HOM05D006956 ORTHO05D008824 2.3e-58 229.2 146 78.1
MSTRG.13068 Avicennia marina HOM05D006956 ORTHO05D008824 3.0e-58 228.8 155 71.0
Haze_03154 Corylus avellana HOM05D006956 ORTHO05D008824 3.0e-58 228.8 146 76.7
Gohir.A11G291500 Gossypium hirsutum HOM05D006956 ORTHO05D008824 5.1e-58 228.0 143 78.3
CANSAT54G1214 Cannabis sativa HOM05D006956 ORTHO05D008824 6.6e-58 227.6 153 73.9
CSS0020916 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 8.6e-58 227.3 153 70.6
VMungo1080G0523 Vigna mungo HOM05D006956 ORTHO05D008824 1.1e-57 226.9 156 67.3
Cfa010806 Carpinus fangiana HOM05D006956 ORTHO05D008824 2.5e-57 225.7 144 77.1
Glyma.15G256600 Glycine max HOM05D006956 ORTHO05D008824 3.3e-57 225.3 156 69.2
Manes.06G172400 Manihot esculenta HOM05D006956 ORTHO05D008824 5.6e-57 224.6 156 71.8
Hma1.2p1_0334F.1_g128720 Hydrangea macrophylla HOM05D006956 ORTHO05D008824 9.5e-57 223.8 153 71.9
vmacro00957 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 9.5e-57 223.8 155 71.0
Eucgr.A00498 Eucalyptus grandis HOM05D006956 ORTHO05D008824 1.2e-56 223.4 155 69.0
TPR.G9744 Trifolium pratense HOM05D006956 ORTHO05D008824 1.6e-56 223.0 156 67.9
arahy.Tifrunner.gnm1.ann1.JC2BA5 Arachis hypogaea HOM05D006956 ORTHO05D008824 2.1e-56 222.6 156 66.7
Medtr2g069340 Medicago truncatula HOM05D006956 ORTHO05D008824 2.1e-56 222.6 156 67.9
Prupe.4G139000 Prunus persica HOM05D006956 ORTHO05D008824 2.1e-56 222.6 144 75.7
Cc05_g16140 Coffea canephora HOM05D006956 ORTHO05D008824 4.7e-56 221.5 157 70.1
Sabra16G0296900 Salix brachista HOM05D006956 ORTHO05D008824 4.7e-56 221.5 160 70.6
Lj3g0016125 Lotus japonicus HOM05D006956 ORTHO05D008824 6.2e-56 221.1 153 68.0
Lalb_Chr20g0108711 Lupinus albus HOM05D006956 ORTHO05D008824 8.1e-56 220.7 156 67.3
Ca_03670_v3 Cicer arietinum L. HOM05D006956 ORTHO05D008824 1.1e-55 220.3 156 67.9
Migut.H01688 Erythranthe guttata HOM05D006956 ORTHO05D008824 1.1e-55 220.3 153 68.6
BraA09t41455Z Brassica rapa HOM05D006956 ORTHO05D008824 3.1e-55 218.8 156 67.9
Atru.chr9.1519 Acer truncatum HOM05D006956 ORTHO05D008824 4.0e-55 218.4 144 73.6
C08p44410 Brassica napus HOM05D006956 ORTHO05D008824 4.0e-55 218.4 156 67.3
A09p60820 Brassica napus HOM05D006956 ORTHO05D008824 6.8e-55 217.6 156 67.9
Ciclev10022296m.g Citrus clementina HOM05D006956 ORTHO05D008824 8.9e-55 217.2 150 72.0
Aqoxy1G01495 Aquilegia oxysepala HOM05D006956 ORTHO05D008824 1.2e-54 216.9 155 68.4
HPP92_011671 Vanilla planifolia HOM05D006956 ORTHO05D008824 3.4e-54 215.3 145 67.6
BolC8t51982H Brassica oleracea HOM05D006956 ORTHO05D008824 5.8e-54 214.5 145 71.0
SalBow5G4858 Salvia bowleyana HOM05D006956 ORTHO05D008824 5.8e-54 214.5 155 65.2
RcHm_v2.0_Chr5g0026331 Rosa chinensis HOM05D006956 ORTHO05D008824 7.5e-54 214.2 153 69.9
FvH4_3g15651 Fragaria vesca HOM05D006956 ORTHO05D008824 9.9e-54 213.8 153 69.3
CSS0000379 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 1.3e-53 213.4 155 68.4
PGR142G1185 Punica granatum HOM05D006956 ORTHO05D008824 7.1e-52 207.6 144 70.8
Thhalv10008810m.g Eutrema salsugineum HOM05D006956 ORTHO05D008824 9.2e-52 207.2 156 66.0
Zm00001eb198240 Zea mays HOM05D006956 ORTHO05D008824 9.2e-52 207.2 149 65.1
arahy.Tifrunner.gnm1.ann1.82TPB7 Arachis hypogaea HOM05D006956 ORTHO05D008824 1.2e-51 206.8 187 55.6
Nitab4.5_0001526g0100 Nicotiana tabacum HOM05D006956 ORTHO05D008824 4.6e-51 204.9 170 61.2
THA.LOC104808124 Tarenaya hassleriana HOM05D006956 ORTHO05D008824 6.0e-51 204.5 152 65.1
AT1G16590 Arabidopsis thaliana HOM05D006956 ORTHO05D008824 7.8e-51 204.1 145 67.6
FAN21G1707 Fragaria x ananassa HOM05D006956 ORTHO05D008824 7.8e-51 204.1 153 66.7
AL1G28750 Arabidopsis lyrata HOM05D006956 ORTHO05D008824 1.3e-50 203.4 145 68.3
FAN11G3326 Fragaria x ananassa HOM05D006956 ORTHO05D008824 2.3e-50 202.6 170 62.4
SGA_v2.0_scaffold49G18176 Striga asiatica HOM05D006956 ORTHO05D008824 5.6e-49 198.0 150 66.0
PSO223G0077 Papaver somniferum HOM05D006956 ORTHO05D008824 9.5e-49 197.2 153 64.1
CARHR017060 Cardamine hirsuta HOM05D006956 ORTHO05D008824 2.1e-48 196.1 144 66.0
Carub.0001s1634 Capsella rubella HOM05D006956 ORTHO05D008824 4.7e-48 194.9 145 66.2
PSO210G3417 Papaver somniferum HOM05D006956 ORTHO05D008824 8.1e-48 194.1 142 66.2
CDE05G1956 Ceratophyllum demersum HOM05D003342 ORTHO05D003861 3.1e-47 192.2 155 61.9
Aa31LG7G1120 Aethionema arabicum HOM05D006956 ORTHO05D008824 4.0e-47 191.8 153 61.4
AUR62042418 Chenopodium quinoa HOM05D006956 ORTHO05D008824 8.9e-47 190.7 136 65.4
AUR62026907 Chenopodium quinoa HOM05D006956 ORTHO05D008824 2.0e-46 189.5 137 65.7
Prupe.4G141800 Prunus persica HOM05D006956 ORTHO05D008824 1.3e-45 186.8 131 72.5
PGSC0003DMG400014067 Solanum tuberosum HOM05D006956 ORTHO05D008466 2.2e-45 186.0 129 70.5
FAN25G3578 Fragaria x ananassa HOM05D006956 ORTHO05D008824 4.6e-43 178.3 138 66.7
Actinidia35432 Actinidia chinensis HOM05D006956 ORTHO05D008824 7.8e-43 177.6 147 64.6
MBI18_g45405_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 1.9e-41 172.9 112 75.0
MD17G1180100 Malus domestica HOM05D006956 ORTHO05D008824 5.6e-41 171.4 126 70.6
Sp1g14740 Schrenkiella parvula HOM05D006956 ORTHO05D008824 7.3e-41 171.0 145 59.3
HanXRQChr08g0231891 Helianthus annuus HOM05D006956 ORTHO05D008824 3.6e-40 168.7 149 56.4
ECA247G3084 Erigeron canadensis HOM05D006956 ORTHO05D008824 1.1e-39 167.2 146 57.5
Sc08g0007560 Simmondsia chinensis HOM05D006956 ORTHO05D008824 1.9e-33 146.4 109 62.4
AagrBONN_evm.TU.Sc2ySwM_368.712 Anthoceros agrestis HOM05D006956 ORTHO05D008824 2.1e-32 142.9 135 50.4
Mapoly0023s0023 Marchantia polymorpha HOM05D006956 ORTHO05D008824 1.4e-31 140.2 127 52.8
Pp3c4_6830 Physcomitrium patens HOM05D006956 ORTHO05D008824 4.0e-31 138.7 146 44.5
Pp3c4_6840 Physcomitrium patens HOM05D006956 ORTHO05D008824 4.5e-30 135.2 145 42.8
SMO340G0149 Selaginella moellendorffii HOM05D006956 ORTHO05D008824 5.8e-30 134.8 148 43.9
Prupe.4G139100 Prunus persica HOM05D006956 ORTHO05D008824 1.9e-28 129.8 144 52.1
Lsat_1_v5_gn_6_63040 Lactuca sativa HOM05D006956 ORTHO05D008824 2.3e-26 122.9 126 51.6
FAN16G1261 Fragaria x ananassa HOM05D006956 ORTHO05D008824 8.7e-26 120.9 113 58.4
RcHm_v2.0_Chr5g0026311 Rosa chinensis HOM05D006956 ORTHO05D008824 8.1e-24 114.4 76 75.0
QL04p076191 Quercus lobata HOM05D006956 ORTHO05D008824 9.0e-23 110.9 78 71.8
QL93p0133_0021 Quercus lobata HOM05D006956 ORTHO05D008824 9.0e-23 110.9 78 71.8
Lju41A37T48 Lonicera japonica HOM05D006956 ORTHO05D008824 2.0e-22 109.8 76 64.5
MBI18_g44288_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 6.4e-21 104.8 76 65.8
ATR0753G159 Amborella trichopoda HOM05D006956 ORTHO05D008824 2.1e-19 99.8 93 54.8
MD05G1220700 Malus domestica HOM05D006956 ORTHO05D008824 1.8e-18 96.7 89 53.9
Cre13.g575333 Chlamydomonas reinhardtii HOM05D006956 ORTHO05D008824 3.0e-18 95.9 146 37.7
Cpa.g.sc67.70 Carica papaya HOM05D006956 ORTHO05D008824 4.3e-17 92.0 62 72.6
SEGI_37897 Sequoiadendron giganteum HOM05D006956 ORTHO05D008824 4.8e-16 88.6 81 51.9
vmacro22747 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 5.3e-15 85.1 61 67.2
Glyma.08G170300 Glycine max HOM05D006956 ORTHO05D008824 3.0e-10 69.3 52 63.5
Lju41A37T47 Lonicera japonica HOM05D006956 ORTHO05D008824 1.1e-09 67.4 46 71.7
AagrBONN_evm.TU.Sc2ySwM_362.2804 Anthoceros agrestis HOM05D006956 ORTHO05D008824 2.4e-07 59.7 63 49.2


User provided reference genes

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