Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 3.7e-210 734.6 353 100.0
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 9.1e-185 650.2 351 88.3
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 4.5e-184 647.9 353 87.3
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 4.7e-181 637.9 371 84.1
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 1.1e-142 510.4 358 70.4
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 6.2e-141 504.6 358 66.8
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 6.2e-141 504.6 358 66.8
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 3.1e-140 502.3 357 68.6
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 4.4e-139 498.4 356 67.7
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 8.3e-138 494.2 359 68.5
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.4e-137 492.7 356 66.3
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 9.2e-137 490.7 356 65.7
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 3.9e-135 485.3 360 67.8
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 5.1e-135 485.0 346 68.5
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.1e-134 483.8 360 67.5
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 5.6e-134 481.5 352 67.9
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 5.6e-134 481.5 359 65.5
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 7.3e-134 481.1 360 67.5
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 9.5e-134 480.7 358 65.1
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 1.6e-133 479.9 360 67.8
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 1.6e-133 479.9 350 68.0
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 2.8e-133 479.2 344 68.0
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 1.5e-131 473.4 359 64.9
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 7.6e-131 471.1 353 67.1
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 7.6e-131 471.1 347 66.9
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 7.6e-131 471.1 359 64.1
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 1.3e-130 470.3 357 65.3
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 1.3e-130 470.3 348 66.4
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 4.9e-130 468.4 359 65.7
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.1e-129 465.3 344 65.4
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 2.7e-128 462.6 386 63.2
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 2.7e-128 462.6 354 64.7
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 1.7e-127 459.9 348 64.7
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 2.3e-127 459.5 362 63.3
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 3.0e-127 459.1 346 64.7
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 1.6e-125 453.4 362 61.9
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 2.1e-125 453.0 359 63.5
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 6.4e-122 441.4 352 61.6
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 3.2e-121 439.1 365 59.2
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 3.2e-121 439.1 365 59.2
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 1.2e-120 437.2 346 60.1
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 3.5e-120 435.6 360 60.6
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 4.6e-120 435.3 362 60.8
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 1.3e-119 433.7 362 60.8
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 1.3e-119 433.7 362 60.8
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 1.9e-118 429.9 364 58.8
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 3.3e-118 429.1 350 59.1
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 4.3e-118 428.7 350 59.1
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 1.3e-117 427.2 364 58.0
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 1.6e-117 426.8 359 61.8
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.1e-116 424.1 356 58.7
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 1.2e-115 420.6 367 58.3
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 1.2e-115 420.6 356 58.7
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 2.6e-115 419.5 356 58.4
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 7.6e-115 417.9 334 61.4
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 1.3e-114 417.2 361 58.2
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 2.2e-114 416.4 356 58.1
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 8.4e-114 414.5 357 58.8
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 8.4e-114 414.5 352 59.1
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 3.2e-113 412.5 364 58.2
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 2.7e-112 409.5 352 57.4
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 6.0e-112 408.3 356 55.9
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 6.0e-112 408.3 371 58.2
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 1.8e-111 406.8 373 56.0
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 2.3e-111 406.4 371 57.1
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 4.3e-110 402.1 361 58.2
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 7.4e-110 401.4 371 58.0
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 1.6e-109 400.2 369 58.0
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 8.1e-109 397.9 365 58.1
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 1.1e-108 397.5 365 58.1
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 1.4e-108 397.1 354 59.6
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 3.1e-108 396.0 365 57.5
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 6.9e-108 394.8 354 58.8
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 2.6e-107 392.9 359 56.0
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 3.4e-107 392.5 356 54.5
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 4.5e-107 392.1 365 57.3
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 5.8e-107 391.7 366 55.7
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 1.7e-106 390.2 360 59.7
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 2.2e-106 389.8 329 58.4
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 6.4e-106 388.3 339 60.2
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 8.4e-106 387.9 364 54.1
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 1.9e-105 386.7 350 56.3
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 2.4e-105 386.3 363 56.5
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 4.6e-104 382.1 371 53.6
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 5.6e-102 375.2 362 55.5
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 1.3e-101 374.0 350 53.4
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 1.6e-101 373.6 356 55.3
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 5.8e-99 365.2 335 58.8
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 1.7e-98 363.6 335 58.2
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 1.7e-98 363.6 335 58.5
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 6.5e-98 361.7 363 54.0
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 8.4e-98 361.3 334 58.7
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 2.1e-96 356.7 351 56.1
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 1.8e-84 317.0 235 65.5
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 7.7e-83 311.6 251 62.5
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 2.5e-81 306.6 252 61.5
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 2.7e-80 303.1 232 64.2
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 9.1e-76 288.1 353 44.5
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 2.9e-74 283.1 350 45.4
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 3.8e-74 282.7 355 47.9
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 1.2e-72 277.7 281 53.7
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.4e-68 264.2 211 62.1
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.1e-68 263.1 211 61.6
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.3e-68 262.3 211 62.1
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 7.7e-67 258.5 213 62.4
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 1.0e-66 258.1 215 59.1
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 1.5e-65 254.2 311 46.6
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 1.7e-61 240.7 167 68.3
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 8.2e-61 238.4 371 36.4
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 8.0e-56 221.9 218 53.2
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 8.6e-50 201.8 143 68.5
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 3.6e-48 196.4 238 48.3
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 2.8e-45 186.8 393 30.5
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.7e-42 177.6 213 46.5
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 1.9e-41 174.1 146 56.2
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.1e-40 170.6 122 63.1
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 7.0e-36 155.6 168 45.8
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.3e-21 105.5 64 70.3
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.7e-18 97.8 64 64.1
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.1e-15 88.6 64 62.5
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 1.2e-11 75.1 126 41.3
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 3.9e-10 70.1 52 57.7
Zm00001eb038770 Zea mays HOM05D006038 ORTHO05D007547 5.6e-09 66.2 53 54.7
Zm00001eb046820 Zea mays HOM05D006038 ORTHO05D007547 5.6e-09 66.2 53 54.7
Zm00001eb051760 Zea mays HOM05D006038 ORTHO05D007547 5.6e-09 66.2 53 54.7
Zm00001eb253640 Zea mays HOM05D006038 ORTHO05D007547 9.6e-09 65.5 55 52.7
Zm00001eb369920 Zea mays HOM05D006038 ORTHO05D007547 2.1e-08 64.3 51 52.9
QL93p0107_0059 Quercus lobata HOM05D006038 ORTHO05D007547 4.0e-07 60.1 55 50.9


User provided reference genes

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